RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ATF7IPQ6VMQ6 1270 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 HECW2Q9P2P5 1572 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 MTHFSP49914 203 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 BMP2KLQ5H9B9 411 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 ANTXR1Q9H6X2 564 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 IBTKQ9P2D0 1353 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-205ENST00000397611 RBM25P49756 843 aaKnown RBP6.8□□□□□ -1.32
PTPRD-205ENST00000397611 CD109Q6YHK3 1445 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 UGGT1Q9NYU2 1555 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 SPINK5Q9NQ38 1064 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-205ENST00000397611 AATKQ6ZMQ8 1374 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 PLPPR3Q6T4P5 718 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 GCC1Q96CN9 775 aa6.8□□□□□ -1.32
PTPRD-205ENST00000397611 EPB41L2O43491 1005 aaKnown RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 ZCCHC11Q5TAX3 1644 aaKnown RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 CHMP4AQ9BY43 222 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 SLC12A5Q9H2X9 1139 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 COG6Q9Y2V7 657 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 ARHGEF40Q8TER5 1519 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 CEP152O94986 1710 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 SKOR2Q2VWA4 1001 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 CASC1Q6TDU7 716 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 API5Q9BZZ5 524 aaKnown RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 U2AF1L5P0DN76 240 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 U2AF1Q01081 240 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 TNNT3P45378 269 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 CLEC17AQ6ZS10 378 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 DDX11L8A8MPP1 907 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 CHGAP10645 457 aaKnown RBP6.79□□□□□ -1.32
PTPRD-205ENST00000397611 KIAA2012Q0VF49 1180 aa6.79□□□□□ -1.32
PTPRD-205ENST00000397611 HDGFL2Q7Z4V5 671 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-205ENST00000397611 CFAP74Q9C0B2 1584 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 BCAR3O75815 825 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 YEATS2Q9ULM3 1422 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 ADGRB2O60241 1585 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 GNAI1P63096 354 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 AGLP35573 1532 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 ABCA6Q8N139 1617 aa6.78□□□□□ -1.32
PTPRD-205ENST00000397611 DLC1Q96QB1 1528 aa6.77□□□□□ -1.32
PTPRD-205ENST00000397611 NCOA3Q9Y6Q9 1424 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 SOS1Q07889 1333 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-205ENST00000397611 FRAT2O75474 233 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-205ENST00000397611 PCDHB15Q9Y5E8 787 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 ZBTB40Q9NUA8 1239 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 CDC42BPGQ6DT37 1551 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 TMPOP42166 694 aaKnown RBP6.77□□□□□ -1.33
PTPRD-205ENST00000397611 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 NLRP1Q9C000 1473 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 MCM4P33991 863 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 MRE11P49959 708 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 ERCC6L2Q5T890 1561 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 ATP7BP35670 1465 aa6.77□□□□□ -1.33
PTPRD-205ENST00000397611 DRC7Q8IY82 874 aa6.76□□□□□ -1.33
PTPRD-205ENST00000397611 TECPR2O15040 1411 aa6.76□□□□□ -1.33
PTPRD-205ENST00000397611 FSD2A1L4K1 749 aa6.76□□□□□ -1.33
PTPRD-205ENST00000397611 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
PTPRD-205ENST00000397611 HDGFP51858 240 aaKnown RBP6.76□□□□□ -1.33
PTPRD-205ENST00000397611 MYOM1P52179 1685 aa6.76□□□□□ -1.33
PTPRD-205ENST00000397611 IGHDP01880 384 aa6.76□□□□□ -1.33
PTPRD-205ENST00000397611 TRAK1Q9UPV9 953 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
PTPRD-205ENST00000397611 C22orf23Q9BZE7 217 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 SMC4Q9NTJ3 1288 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 CPSF1Q10570 1443 aaKnown RBP6.75□□□□□ -1.33
PTPRD-205ENST00000397611 RPAP2Q8IXW5 612 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-205ENST00000397611 IDI1Q13907 227 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 PANK1Q8TE04 598 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 DMRT2Q9Y5R5 561 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 ZNF771Q7L3S4 317 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-205ENST00000397611 SSH1Q8WYL5 1049 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 CHD1O14646 1710 aa6.75□□□□□ -1.33
PTPRD-205ENST00000397611 FYB1O15117 783 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 OSCARQ8IYS5 282 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 PTCH1Q13635 1447 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 ZNF853P0CG23 659 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 TRIM27P14373 513 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 FAM135BQ49AJ0 1406 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 YTHDC2Q9H6S0 1430 aaKnown RBP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 PIK3C2BO00750 1634 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 CCDC146Q8IYE0 955 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 IFT57Q9NWB7 429 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 KIAA0232Q92628 1395 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 ZRSR1Q15695 479 aaKnown RBP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 PLEKHF1Q96S99 279 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 COL3A1P02461 1466 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 ZNF692Q9BU19 519 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 PPRC1Q5VV67 1664 aaKnown RBP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 A0A1W2PP64 1363 aa6.74□□□□□ -1.33
PTPRD-205ENST00000397611 R3HCC1Q9Y3T6 440 aaKnown RBP6.74□□□□□ -1.33
PTPRD-205ENST00000397611 GOLGA6L6A8MZA4 724 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 RLBP1P12271 317 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 FRMPD1Q5SYB0 1578 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 NFE2L2Q16236 605 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-205ENST00000397611 CLCN1P35523 988 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 KIDINS220Q9ULH0 1771 aa6.73□□□□□ -1.33
PTPRD-205ENST00000397611 NEXMIFQ5QGS0 1516 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms