RNA–Protein interactions for RNA: ENST00000397088.3

GPER1-202, Transcript of G protein-coupled estrogen receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPER1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPER1-202ENST00000397088 TSC1Q92574 1164 aa20.21■□□□□ 0.83
GPER1-202ENST00000397088 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
GPER1-202ENST00000397088 DDX19BQ9UMR2 479 aa20.21■□□□□ 0.83
GPER1-202ENST00000397088 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
GPER1-202ENST00000397088 AK9Q5TCS8 1911 aa20.2■□□□□ 0.82
GPER1-202ENST00000397088 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
GPER1-202ENST00000397088 RBM27Q9P2N5 1060 aaKnown RBP20.2■□□□□ 0.82
GPER1-202ENST00000397088 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
GPER1-202ENST00000397088 ITPRIPQ8IWB1 547 aa20.2■□□□□ 0.82
GPER1-202ENST00000397088 LNPKQ9C0E8 428 aa20.2■□□□□ 0.82
GPER1-202ENST00000397088 ZCCHC11Q5TAX3 1644 aaKnown RBP20.19■□□□□ 0.82
GPER1-202ENST00000397088 NUCB1Q02818 461 aa20.19■□□□□ 0.82
GPER1-202ENST00000397088 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
GPER1-202ENST00000397088 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
GPER1-202ENST00000397088 BMP2KLQ5H9B9 411 aa20.19■□□□□ 0.82
GPER1-202ENST00000397088 NAP1L2Q9ULW6 460 aaPredicted RBP20.19■□□□□ 0.82
GPER1-202ENST00000397088 UHRF1BP1LA0JNW5 1464 aa20.18■□□□□ 0.82
GPER1-202ENST00000397088 ZBTB7CA1YPR0 619 aa20.18■□□□□ 0.82
GPER1-202ENST00000397088 GTF2F1P35269 517 aaKnown RBP eCLIP20.18■□□□□ 0.82
GPER1-202ENST00000397088 PRPF40AO75400 957 aaKnown RBP20.17■□□□□ 0.82
GPER1-202ENST00000397088 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.17■□□□□ 0.82
GPER1-202ENST00000397088 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
GPER1-202ENST00000397088 SYCE3A1L190 88 aa20.16■□□□□ 0.82
GPER1-202ENST00000397088 MYOM1P52179 1685 aa20.16■□□□□ 0.82
GPER1-202ENST00000397088 KANK1Q14678 1352 aa20.16■□□□□ 0.82
GPER1-202ENST00000397088 CYP2E1P05181 493 aaPredicted RBP20.16■□□□□ 0.82
GPER1-202ENST00000397088 TMEM51Q9NW97 253 aa20.16■□□□□ 0.82
GPER1-202ENST00000397088 TRIM27P14373 513 aa20.15■□□□□ 0.82
GPER1-202ENST00000397088 TAF3Q5VWG9 929 aa20.15■□□□□ 0.82
GPER1-202ENST00000397088 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
GPER1-202ENST00000397088 CHD1LQ86WJ1 897 aa20.15■□□□□ 0.82
GPER1-202ENST00000397088 RNF214Q8ND24 703 aa20.14■□□□□ 0.82
GPER1-202ENST00000397088 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.82
GPER1-202ENST00000397088 TMEM63CQ9P1W3 806 aa20.14■□□□□ 0.82
GPER1-202ENST00000397088 KIF3AQ9Y496 699 aa20.14■□□□□ 0.82
GPER1-202ENST00000397088 IQSEC2Q5JU85 1478 aa20.14■□□□□ 0.81
GPER1-202ENST00000397088 IQGAP1P46940 1657 aa20.14■□□□□ 0.81
GPER1-202ENST00000397088 TBC1D9Q6ZT07 1266 aa20.13■□□□□ 0.81
GPER1-202ENST00000397088 HNRNPMP52272 730 aaKnown RBP eCLIP20.13■□□□□ 0.81
GPER1-202ENST00000397088 PDIA4P13667 645 aaKnown RBP20.12■□□□□ 0.81
GPER1-202ENST00000397088 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
GPER1-202ENST00000397088 PKP1Q13835 747 aa20.12■□□□□ 0.81
GPER1-202ENST00000397088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.81
GPER1-202ENST00000397088 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
GPER1-202ENST00000397088 SPDYE4A6NLX3 237 aa20.11■□□□□ 0.81
GPER1-202ENST00000397088 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
GPER1-202ENST00000397088 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
GPER1-202ENST00000397088 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
GPER1-202ENST00000397088 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
GPER1-202ENST00000397088 ZBTB40Q9NUA8 1239 aa20.1■□□□□ 0.81
GPER1-202ENST00000397088 RIMBP3CA6NJZ7 1639 aa20.1■□□□□ 0.81
GPER1-202ENST00000397088 RIMBP3BA6NNM3 1639 aa20.1■□□□□ 0.81
GPER1-202ENST00000397088 RIMBP3Q9UFD9 1639 aa20.1■□□□□ 0.81
GPER1-202ENST00000397088 NOLC1Q14978 699 aaKnown RBP eCLIP20.1■□□□□ 0.81
GPER1-202ENST00000397088 RABEP1Q15276 862 aa20.1■□□□□ 0.81
GPER1-202ENST00000397088 PDCL2Q8N4E4 241 aa20.1■□□□□ 0.81
GPER1-202ENST00000397088 FAM177BA6PVY3 158 aa20.09■□□□□ 0.81
GPER1-202ENST00000397088 CWC22Q9HCG8 908 aaKnown RBP20.09■□□□□ 0.81
GPER1-202ENST00000397088 CARD14Q9BXL6 1004 aa20.09■□□□□ 0.81
GPER1-202ENST00000397088 BCL2L12Q9HB09 334 aa20.09■□□□□ 0.81
GPER1-202ENST00000397088 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.81
GPER1-202ENST00000397088 IPO4Q8TEX9 1081 aaKnown RBP20.08■□□□□ 0.81
GPER1-202ENST00000397088 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.8
GPER1-202ENST00000397088 KDM5AP29375 1690 aaKnown RBP20.06■□□□□ 0.8
GPER1-202ENST00000397088 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
GPER1-202ENST00000397088 TSPY26PQ9H489 355 aa20.06■□□□□ 0.8
GPER1-202ENST00000397088 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
GPER1-202ENST00000397088 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
GPER1-202ENST00000397088 MBD3O95983 291 aa20.06■□□□□ 0.8
GPER1-202ENST00000397088 ANKRD45Q5TZF3 282 aa20.06■□□□□ 0.8
GPER1-202ENST00000397088 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
GPER1-202ENST00000397088 CGNQ9P2M7 1197 aaKnown RBP20.06■□□□□ 0.8
GPER1-202ENST00000397088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.8
GPER1-202ENST00000397088 NPM1P06748 294 aaKnown RBP eCLIP20.05■□□□□ 0.8
GPER1-202ENST00000397088 NOB1Q9ULX3 412 aaKnown RBP20.05■□□□□ 0.8
GPER1-202ENST00000397088 IGSF3O75054 1194 aa20.05■□□□□ 0.8
GPER1-202ENST00000397088 TSR2Q969E8 191 aaKnown RBP20.05■□□□□ 0.8
GPER1-202ENST00000397088 ARHGEF5Q12774 1597 aa20.05■□□□□ 0.8
GPER1-202ENST00000397088 ZNF830Q96NB3 372 aaPredicted RBP20.04■□□□□ 0.8
GPER1-202ENST00000397088 CDC45O75419 566 aa20.04■□□□□ 0.8
GPER1-202ENST00000397088 EXOSC9Q06265 439 aaKnown RBP20.04■□□□□ 0.8
GPER1-202ENST00000397088 ZNF771Q7L3S4 317 aaPredicted RBP20.04■□□□□ 0.8
GPER1-202ENST00000397088 FKBP5Q13451 457 aaPredicted RBP20.03■□□□□ 0.8
GPER1-202ENST00000397088 MPNDQ8N594 471 aa20.03■□□□□ 0.8
GPER1-202ENST00000397088 MADDQ8WXG6 1647 aa20.03■□□□□ 0.8
GPER1-202ENST00000397088 ZDHHC9Q9Y397 364 aa20.03■□□□□ 0.8
GPER1-202ENST00000397088 CEP152O94986 1710 aa20.02■□□□□ 0.8
GPER1-202ENST00000397088 UNC13BO14795 1591 aa20.02■□□□□ 0.8
GPER1-202ENST00000397088 ASXL2Q76L83 1435 aa20.02■□□□□ 0.8
GPER1-202ENST00000397088 U2AF2P26368 475 aaKnown RBP eCLIP20.02■□□□□ 0.8
GPER1-202ENST00000397088 MORC1Q86VD1 984 aa20.02■□□□□ 0.8
GPER1-202ENST00000397088 ATP10AO60312 1499 aa20.02■□□□□ 0.8
GPER1-202ENST00000397088 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.79
GPER1-202ENST00000397088 VGLL3A8MV65 326 aa20.01■□□□□ 0.79
GPER1-202ENST00000397088 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
GPER1-202ENST00000397088 C17orf53Q8N3J3 647 aaPredicted RBP20.01■□□□□ 0.79
GPER1-202ENST00000397088 CHAMP1Q96JM3 812 aa20.01■□□□□ 0.79
GPER1-202ENST00000397088 SPTLC3Q9NUV7 552 aa20.01■□□□□ 0.79
GPER1-202ENST00000397088 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
GPER1-202ENST00000397088 GCC1Q96CN9 775 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms