RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 TULP4Q9NRJ4 1543 aa13.4□□□□□ -0.26
TUBB-207ENST00000396384 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
TUBB-207ENST00000396384 FRAT1Q92837 279 aaPredicted RBP13.4□□□□□ -0.27
TUBB-207ENST00000396384 CABP2Q9NPB3 220 aa13.4□□□□□ -0.27
TUBB-207ENST00000396384 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
TUBB-207ENST00000396384 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
TUBB-207ENST00000396384 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
TUBB-207ENST00000396384 RRP7AQ9Y3A4 280 aaKnown RBP13.39□□□□□ -0.27
TUBB-207ENST00000396384 NSD3Q9BZ95 1437 aa13.38□□□□□ -0.27
TUBB-207ENST00000396384 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
TUBB-207ENST00000396384 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
TUBB-207ENST00000396384 MED14O60244 1454 aa13.38□□□□□ -0.27
TUBB-207ENST00000396384 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
TUBB-207ENST00000396384 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
TUBB-207ENST00000396384 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
TUBB-207ENST00000396384 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
TUBB-207ENST00000396384 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
TUBB-207ENST00000396384 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
TUBB-207ENST00000396384 DLC1Q96QB1 1528 aa13.37□□□□□ -0.27
TUBB-207ENST00000396384 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
TUBB-207ENST00000396384 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
TUBB-207ENST00000396384 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
TUBB-207ENST00000396384 RTN4Q9NQC3 1192 aaKnown RBP13.35□□□□□ -0.27
TUBB-207ENST00000396384 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
TUBB-207ENST00000396384 AMOTL2Q9Y2J4 779 aa13.35□□□□□ -0.27
TUBB-207ENST00000396384 MTHFSP49914 203 aa13.34□□□□□ -0.27
TUBB-207ENST00000396384 CDK19Q9BWU1 502 aa13.34□□□□□ -0.27
TUBB-207ENST00000396384 TECPR2O15040 1411 aa13.34□□□□□ -0.27
TUBB-207ENST00000396384 USP19O94966 1318 aa13.34□□□□□ -0.27
TUBB-207ENST00000396384 SEC24BO95487 1268 aa13.34□□□□□ -0.27
TUBB-207ENST00000396384 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
TUBB-207ENST00000396384 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
TUBB-207ENST00000396384 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
TUBB-207ENST00000396384 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.28
TUBB-207ENST00000396384 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
TUBB-207ENST00000396384 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
TUBB-207ENST00000396384 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
TUBB-207ENST00000396384 CPS1P31327 1500 aa13.32□□□□□ -0.28
TUBB-207ENST00000396384 AAMPQ13685 434 aa13.32□□□□□ -0.28
TUBB-207ENST00000396384 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
TUBB-207ENST00000396384 RLBP1P12271 317 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 HSPA2P54652 639 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 BRPF3Q9ULD4 1205 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
TUBB-207ENST00000396384 KCNA6P17658 529 aa13.3□□□□□ -0.28
TUBB-207ENST00000396384 CCDC27Q2M243 656 aa13.3□□□□□ -0.28
TUBB-207ENST00000396384 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
TUBB-207ENST00000396384 USP32Q8NFA0 1604 aa13.3□□□□□ -0.28
TUBB-207ENST00000396384 VIRMAQ69YN4 1812 aaKnown RBP13.3□□□□□ -0.28
TUBB-207ENST00000396384 WASLO00401 505 aaPredicted RBP13.3□□□□□ -0.28
TUBB-207ENST00000396384 BECN1Q14457 450 aa13.3□□□□□ -0.28
TUBB-207ENST00000396384 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
TUBB-207ENST00000396384 MYH16Q9H6N6 1097 aa13.29□□□□□ -0.28
TUBB-207ENST00000396384 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.29□□□□□ -0.28
TUBB-207ENST00000396384 NPHP4O75161 1426 aaPredicted RBP13.29□□□□□ -0.28
TUBB-207ENST00000396384 NUTM2FA1L443 756 aa13.28□□□□□ -0.28
TUBB-207ENST00000396384 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
TUBB-207ENST00000396384 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
TUBB-207ENST00000396384 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
TUBB-207ENST00000396384 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
TUBB-207ENST00000396384 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
TUBB-207ENST00000396384 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
TUBB-207ENST00000396384 CABP1Q9NZU7 370 aa13.28□□□□□ -0.28
TUBB-207ENST00000396384 PDZRN3Q9UPQ7 1066 aa13.27□□□□□ -0.28
TUBB-207ENST00000396384 ATAD2Q6PL18 1390 aa13.27□□□□□ -0.29
TUBB-207ENST00000396384 XRN1Q8IZH2 1706 aaKnown RBP13.26□□□□□ -0.29
TUBB-207ENST00000396384 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
TUBB-207ENST00000396384 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
TUBB-207ENST00000396384 PTCH1Q13635 1447 aa13.25□□□□□ -0.29
TUBB-207ENST00000396384 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
TUBB-207ENST00000396384 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
TUBB-207ENST00000396384 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
TUBB-207ENST00000396384 NUDT16Q96DE0 195 aaKnown RBP13.25□□□□□ -0.29
TUBB-207ENST00000396384 PIK3R4Q99570 1358 aa13.25□□□□□ -0.29
TUBB-207ENST00000396384 ZKSCAN2Q63HK3 967 aa13.24□□□□□ -0.29
TUBB-207ENST00000396384 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
TUBB-207ENST00000396384 NSD2O96028 1365 aa13.24□□□□□ -0.29
TUBB-207ENST00000396384 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
TUBB-207ENST00000396384 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
TUBB-207ENST00000396384 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
TUBB-207ENST00000396384 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
TUBB-207ENST00000396384 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
TUBB-207ENST00000396384 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
TUBB-207ENST00000396384 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
TUBB-207ENST00000396384 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
TUBB-207ENST00000396384 PPIP5K1Q6PFW1 1433 aa13.22□□□□□ -0.29
TUBB-207ENST00000396384 U2SURPO15042 1029 aaKnown RBP13.22□□□□□ -0.29
TUBB-207ENST00000396384 TERF2IPQ9NYB0 399 aa13.22□□□□□ -0.29
TUBB-207ENST00000396384 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
TUBB-207ENST00000396384 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
TUBB-207ENST00000396384 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
TUBB-207ENST00000396384 ATP7BP35670 1465 aa13.21□□□□□ -0.29
TUBB-207ENST00000396384 ADGRB2O60241 1585 aa13.21□□□□□ -0.3
TUBB-207ENST00000396384 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
TUBB-207ENST00000396384 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
TUBB-207ENST00000396384 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms