RNA–Protein interactions for RNA: ENST00000395834.5

CDKL1-203, Transcript of cyclin dependent kinase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL1, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-203ENST00000395834 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
CDKL1-203ENST00000395834 POLR3AO14802 1390 aaPredicted RBP16.28■□□□□ 0.2
CDKL1-203ENST00000395834 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDKL1-203ENST00000395834 USP6P35125 1406 aa16.27■□□□□ 0.2
CDKL1-203ENST00000395834 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
CDKL1-203ENST00000395834 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
CDKL1-203ENST00000395834 ATF3P18847 181 aa16.25■□□□□ 0.19
CDKL1-203ENST00000395834 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDKL1-203ENST00000395834 COG3Q96JB2 828 aa16.25■□□□□ 0.19
CDKL1-203ENST00000395834 CFAP53Q96M91 514 aa16.25■□□□□ 0.19
CDKL1-203ENST00000395834 PHF8Q9UPP1 1060 aa16.25■□□□□ 0.19
CDKL1-203ENST00000395834 DCCP43146 1447 aa16.25■□□□□ 0.19
CDKL1-203ENST00000395834 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
CDKL1-203ENST00000395834 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
CDKL1-203ENST00000395834 NME9Q86XW9 330 aa16.24■□□□□ 0.19
CDKL1-203ENST00000395834 MSH6P52701 1360 aa16.23■□□□□ 0.19
CDKL1-203ENST00000395834 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
CDKL1-203ENST00000395834 MTHFSP49914 203 aa16.22■□□□□ 0.19
CDKL1-203ENST00000395834 INSRP06213 1382 aa16.22■□□□□ 0.19
CDKL1-203ENST00000395834 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
CDKL1-203ENST00000395834 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
CDKL1-203ENST00000395834 KIF1AQ12756 1690 aa16.2■□□□□ 0.18
CDKL1-203ENST00000395834 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
CDKL1-203ENST00000395834 PSME1Q06323 249 aa16.18■□□□□ 0.18
CDKL1-203ENST00000395834 AATKQ6ZMQ8 1374 aa16.18■□□□□ 0.18
CDKL1-203ENST00000395834 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
CDKL1-203ENST00000395834 ZBED9Q6R2W3 1325 aa16.17■□□□□ 0.18
CDKL1-203ENST00000395834 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
CDKL1-203ENST00000395834 MST1RQ04912 1400 aa16.17■□□□□ 0.18
CDKL1-203ENST00000395834 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
CDKL1-203ENST00000395834 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
CDKL1-203ENST00000395834 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
CDKL1-203ENST00000395834 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
CDKL1-203ENST00000395834 ROBO1Q9Y6N7 1651 aa16.16■□□□□ 0.18
CDKL1-203ENST00000395834 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
CDKL1-203ENST00000395834 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
CDKL1-203ENST00000395834 USP31Q70CQ4 1352 aa16.16■□□□□ 0.18
CDKL1-203ENST00000395834 FBXO41Q8TF61 875 aa16.15■□□□□ 0.18
CDKL1-203ENST00000395834 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
CDKL1-203ENST00000395834 PIK3C2AO00443 1686 aa16.15■□□□□ 0.18
CDKL1-203ENST00000395834 SHPRHQ149N8 1683 aa16.14■□□□□ 0.17
CDKL1-203ENST00000395834 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
CDKL1-203ENST00000395834 ABTB2Q8N961 1025 aa16.13■□□□□ 0.17
CDKL1-203ENST00000395834 POLKQ9UBT6 870 aa16.13■□□□□ 0.17
CDKL1-203ENST00000395834 FOXO3O43524 673 aa16.13■□□□□ 0.17
CDKL1-203ENST00000395834 NLRP6P59044 892 aa16.13■□□□□ 0.17
CDKL1-203ENST00000395834 SMG6Q86US8 1419 aaKnown RBP16.13■□□□□ 0.17
CDKL1-203ENST00000395834 UBAP1LF5GYI3 381 aa16.12■□□□□ 0.17
CDKL1-203ENST00000395834 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
CDKL1-203ENST00000395834 CDK12Q9NYV4 1490 aaPredicted RBP16.11■□□□□ 0.17
CDKL1-203ENST00000395834 PNPLA6Q8IY17 1366 aa16.11■□□□□ 0.17
CDKL1-203ENST00000395834 TOM1O60784 492 aa16.11■□□□□ 0.17
CDKL1-203ENST00000395834 NHSL1Q5SYE7 1610 aa16.11■□□□□ 0.17
CDKL1-203ENST00000395834 COL3A1P02461 1466 aaPredicted RBP16.11■□□□□ 0.17
CDKL1-203ENST00000395834 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
CDKL1-203ENST00000395834 EMILIN1Q9Y6C2 1016 aa16.1■□□□□ 0.17
CDKL1-203ENST00000395834 FBLN1P23142 703 aa16.1■□□□□ 0.17
CDKL1-203ENST00000395834 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
CDKL1-203ENST00000395834 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
CDKL1-203ENST00000395834 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.17
CDKL1-203ENST00000395834 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.17
CDKL1-203ENST00000395834 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.17
CDKL1-203ENST00000395834 NUTM2GQ5VZR2 741 aa16.08■□□□□ 0.17
CDKL1-203ENST00000395834 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
CDKL1-203ENST00000395834 SOX12O15370 315 aa16.08■□□□□ 0.16
CDKL1-203ENST00000395834 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.16
CDKL1-203ENST00000395834 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
CDKL1-203ENST00000395834 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
CDKL1-203ENST00000395834 CCDC146Q8IYE0 955 aa16.07■□□□□ 0.16
CDKL1-203ENST00000395834 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
CDKL1-203ENST00000395834 MARF1Q9Y4F3 1742 aaKnown RBP16.07■□□□□ 0.16
CDKL1-203ENST00000395834 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
CDKL1-203ENST00000395834 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
CDKL1-203ENST00000395834 LMOD2Q6P5Q4 547 aa16.05■□□□□ 0.16
CDKL1-203ENST00000395834 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
CDKL1-203ENST00000395834 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
CDKL1-203ENST00000395834 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
CDKL1-203ENST00000395834 SALL2Q9Y467 1007 aaPredicted RBP16.05■□□□□ 0.16
CDKL1-203ENST00000395834 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
CDKL1-203ENST00000395834 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
CDKL1-203ENST00000395834 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
CDKL1-203ENST00000395834 PHLPP1O60346 1717 aa16.04■□□□□ 0.16
CDKL1-203ENST00000395834 SBNO1A3KN83 1393 aa16.04■□□□□ 0.16
CDKL1-203ENST00000395834 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
CDKL1-203ENST00000395834 AMPHP49418 695 aa16.03■□□□□ 0.16
CDKL1-203ENST00000395834 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
CDKL1-203ENST00000395834 FLT4P35916 1363 aa16.03■□□□□ 0.16
CDKL1-203ENST00000395834 KIF24Q5T7B8 1368 aa16.03■□□□□ 0.16
CDKL1-203ENST00000395834 APAF1O14727 1248 aa16.02■□□□□ 0.15
CDKL1-203ENST00000395834 IL13P35225 146 aa16.02■□□□□ 0.15
CDKL1-203ENST00000395834 PDE3BQ13370 1112 aa16.02■□□□□ 0.15
CDKL1-203ENST00000395834 ALS2Q96Q42 1657 aa16.02■□□□□ 0.15
CDKL1-203ENST00000395834 PEAK1Q9H792 1746 aa16.01■□□□□ 0.15
CDKL1-203ENST00000395834 NEFMP07197 916 aa16■□□□□ 0.15
CDKL1-203ENST00000395834 DDX17Q92841 729 aaKnown RBP16■□□□□ 0.15
CDKL1-203ENST00000395834 TNS3Q68CZ2 1445 aa16■□□□□ 0.15
CDKL1-203ENST00000395834 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
CDKL1-203ENST00000395834 PXDNQ92626 1479 aa16■□□□□ 0.15
CDKL1-203ENST00000395834 RTL1A6NKG5 1358 aa16■□□□□ 0.15
CDKL1-203ENST00000395834 FCHSD2O94868 740 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms