RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TULP4Q9NRJ4 1543 aa31.05■■■□□ 2.56
TRAF4-203ENST00000394925 COL14A1Q05707 1796 aaKnown RBP31.03■■■□□ 2.56
TRAF4-203ENST00000394925 NGDNQ8NEJ9 315 aaKnown RBP31.03■■■□□ 2.56
TRAF4-203ENST00000394925 PAK3O75914 559 aaPredicted RBP31.02■■■□□ 2.56
TRAF4-203ENST00000394925 BAG6P46379 1132 aa30.99■■■□□ 2.55
TRAF4-203ENST00000394925 SPATA31A5Q5VU36 1347 aa30.96■■■□□ 2.55
TRAF4-203ENST00000394925 SPATA31A7Q8IWB4 1347 aa30.96■■■□□ 2.55
TRAF4-203ENST00000394925 FAM182BQ5T319 152 aa30.95■■■□□ 2.55
TRAF4-203ENST00000394925 STAC3Q96MF2 364 aa30.95■■■□□ 2.55
TRAF4-203ENST00000394925 PRDM11Q9NQV5 511 aa30.95■■■□□ 2.55
TRAF4-203ENST00000394925 CRYBG1Q9Y4K1 1723 aa30.95■■■□□ 2.54
TRAF4-203ENST00000394925 PSDA5PKW4 1024 aaPredicted RBP30.93■■■□□ 2.54
TRAF4-203ENST00000394925 NUDT16Q96DE0 195 aaKnown RBP30.92■■■□□ 2.54
TRAF4-203ENST00000394925 ARHGEF28Q8N1W1 1705 aaKnown RBP30.92■■■□□ 2.54
TRAF4-203ENST00000394925 ITSN1Q15811 1721 aa30.9■■■□□ 2.54
TRAF4-203ENST00000394925 ATP7BP35670 1465 aa30.9■■■□□ 2.54
TRAF4-203ENST00000394925 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
TRAF4-203ENST00000394925 KIAA0232Q92628 1395 aa30.88■■■□□ 2.53
TRAF4-203ENST00000394925 LRP5O75197 1615 aa30.87■■■□□ 2.53
TRAF4-203ENST00000394925 RGPD1P0DJD0 1748 aa30.87■■■□□ 2.53
TRAF4-203ENST00000394925 CHRNA2Q15822 529 aa30.87■■■□□ 2.53
TRAF4-203ENST00000394925 THSD7AQ9UPZ6 1657 aa30.87■■■□□ 2.53
TRAF4-203ENST00000394925 CDK19Q9BWU1 502 aa30.86■■■□□ 2.53
TRAF4-203ENST00000394925 NUTM2GQ5VZR2 741 aa30.85■■■□□ 2.53
TRAF4-203ENST00000394925 STRN4Q9NRL3 753 aa30.85■■■□□ 2.53
TRAF4-203ENST00000394925 HRCP23327 699 aa30.84■■■□□ 2.53
TRAF4-203ENST00000394925 ZC3H6P61129 1189 aaKnown RBP30.84■■■□□ 2.53
TRAF4-203ENST00000394925 SPATA31A1Q5TZJ5 1347 aa30.83■■■□□ 2.53
TRAF4-203ENST00000394925 PHRF1Q9P1Y6 1649 aaKnown RBP30.83■■■□□ 2.53
TRAF4-203ENST00000394925 ACEP12821 1306 aa30.79■■■□□ 2.52
TRAF4-203ENST00000394925 NBPF8Q3BBV2 869 aa30.78■■■□□ 2.52
TRAF4-203ENST00000394925 CCDC61Q9Y6R9 512 aa30.78■■■□□ 2.52
TRAF4-203ENST00000394925 TNS1Q9HBL0 1735 aaKnown RBP30.78■■■□□ 2.52
TRAF4-203ENST00000394925 POLR3AO14802 1390 aaPredicted RBP30.78■■■□□ 2.52
TRAF4-203ENST00000394925 USP35Q9P2H5 1018 aa30.77■■■□□ 2.52
TRAF4-203ENST00000394925 DISP2A7MBM2 1401 aa30.76■■■□□ 2.51
TRAF4-203ENST00000394925 R3HDM1Q15032 1099 aaKnown RBP30.76■■■□□ 2.51
TRAF4-203ENST00000394925 TOPAZ1Q8N9V7 1692 aa30.76■■■□□ 2.51
TRAF4-203ENST00000394925 TRIM37O94972 964 aa30.75■■■□□ 2.51
TRAF4-203ENST00000394925 EVA1CP58658 441 aa30.75■■■□□ 2.51
TRAF4-203ENST00000394925 EZH2Q15910 746 aaKnown RBP30.75■■■□□ 2.51
TRAF4-203ENST00000394925 FAM196AQ6ZSG2 479 aa30.74■■■□□ 2.51
TRAF4-203ENST00000394925 PLEKHG3A1L390 1219 aa30.73■■■□□ 2.51
TRAF4-203ENST00000394925 ABTB2Q8N961 1025 aa30.73■■■□□ 2.51
TRAF4-203ENST00000394925 SSH2Q76I76 1423 aa30.71■■■□□ 2.51
TRAF4-203ENST00000394925 KIAA1210Q9ULL0 1709 aa30.7■■■□□ 2.51
TRAF4-203ENST00000394925 NBPF1Q3BBV0 1214 aa30.7■■■□□ 2.51
TRAF4-203ENST00000394925 CAMKK2Q96RR4 588 aa30.69■■■□□ 2.5
TRAF4-203ENST00000394925 NRKQ7Z2Y5 1582 aa30.69■■■□□ 2.5
TRAF4-203ENST00000394925 APBA3O96018 575 aa30.68■■■□□ 2.5
TRAF4-203ENST00000394925 PDE3BQ13370 1112 aa30.68■■■□□ 2.5
TRAF4-203ENST00000394925 LARP1Q6PKG0 1096 aaKnown RBP30.68■■■□□ 2.5
TRAF4-203ENST00000394925 BARGINQ6ZT62 677 aa30.68■■■□□ 2.5
TRAF4-203ENST00000394925 CAMTA1Q9Y6Y1 1673 aa30.68■■■□□ 2.5
TRAF4-203ENST00000394925 SRPK2P78362 688 aaKnown RBP30.65■■■□□ 2.5
TRAF4-203ENST00000394925 USP19O94966 1318 aa30.65■■■□□ 2.5
TRAF4-203ENST00000394925 CPDO75976 1380 aa30.65■■■□□ 2.5
TRAF4-203ENST00000394925 TCP11L2Q8N4U5 519 aa30.64■■■□□ 2.5
TRAF4-203ENST00000394925 NLRP13Q86W25 1043 aa30.63■■■□□ 2.49
TRAF4-203ENST00000394925 PPIP5K1Q6PFW1 1433 aa30.63■■■□□ 2.49
TRAF4-203ENST00000394925 LMO7Q8WWI1 1683 aa30.62■■■□□ 2.49
TRAF4-203ENST00000394925 GCP02774 474 aa30.61■■■□□ 2.49
TRAF4-203ENST00000394925 CABP2Q9NPB3 220 aa30.61■■■□□ 2.49
TRAF4-203ENST00000394925 CENPJQ9HC77 1338 aaPredicted RBP30.61■■■□□ 2.49
TRAF4-203ENST00000394925 PARD3Q8TEW0 1356 aa30.6■■■□□ 2.49
TRAF4-203ENST00000394925 THRAP3Q9Y2W1 955 aaKnown RBP30.57■■■□□ 2.48
TRAF4-203ENST00000394925 ZBTB7CA1YPR0 619 aa30.56■■■□□ 2.48
TRAF4-203ENST00000394925 COL5A2P05997 1499 aaPredicted RBP30.54■■■□□ 2.48
TRAF4-203ENST00000394925 RREB1Q92766 1687 aa30.54■■■□□ 2.48
TRAF4-203ENST00000394925 CABP1Q9NZU7 370 aa30.53■■■□□ 2.48
TRAF4-203ENST00000394925 QRICH2Q9H0J4 1663 aa30.52■■■□□ 2.48
TRAF4-203ENST00000394925 NLRP6P59044 892 aa30.52■■■□□ 2.48
TRAF4-203ENST00000394925 BRD4O60885 1362 aaPredicted RBP30.52■■■□□ 2.48
TRAF4-203ENST00000394925 NUP188Q5SRE5 1749 aa30.51■■■□□ 2.47
TRAF4-203ENST00000394925 NBPF14Q5TI25 921 aa30.51■■■□□ 2.47
TRAF4-203ENST00000394925 PARP4Q9UKK3 1724 aaKnown RBP30.5■■■□□ 2.47
TRAF4-203ENST00000394925 USP6P35125 1406 aa30.49■■■□□ 2.47
TRAF4-203ENST00000394925 CRB1P82279 1406 aa30.49■■■□□ 2.47
TRAF4-203ENST00000394925 AATKQ6ZMQ8 1374 aa30.45■■■□□ 2.47
TRAF4-203ENST00000394925 SLIT3O75094 1523 aa30.44■■■□□ 2.46
TRAF4-203ENST00000394925 C11orf95C9JLR9 678 aaPredicted RBP30.43■■■□□ 2.46
TRAF4-203ENST00000394925 OVOS2A0A0G2JMS6 1433 aa30.42■■■□□ 2.46
TRAF4-203ENST00000394925 OVOS2A0A0J9YW53 1432 aa30.42■■■□□ 2.46
TRAF4-203ENST00000394925 OVOS2Q6IE36 1432 aa30.42■■■□□ 2.46
TRAF4-203ENST00000394925 TOM1L2Q6ZVM7 507 aa30.42■■■□□ 2.46
TRAF4-203ENST00000394925 L3MBTL2Q969R5 705 aa30.41■■■□□ 2.46
TRAF4-203ENST00000394925 EVC2Q86UK5 1308 aa30.41■■■□□ 2.46
TRAF4-203ENST00000394925 PIK3C2AO00443 1686 aa30.4■■■□□ 2.46
TRAF4-203ENST00000394925 DDB1Q16531 1140 aa30.4■■■□□ 2.46
TRAF4-203ENST00000394925 PEAK1Q9H792 1746 aa30.39■■■□□ 2.46
TRAF4-203ENST00000394925 COL18A1P39060 1754 aa30.38■■■□□ 2.45
TRAF4-203ENST00000394925 LRRC37A3O60309 1634 aa30.38■■■□□ 2.45
TRAF4-203ENST00000394925 AXIN2Q9Y2T1 843 aa30.38■■■□□ 2.45
TRAF4-203ENST00000394925 SBF2Q86WG5 1849 aa30.37■■■□□ 2.45
TRAF4-203ENST00000394925 SPON1Q9HCB6 807 aa30.35■■■□□ 2.45
TRAF4-203ENST00000394925 WDR17Q8IZU2 1322 aa30.35■■■□□ 2.45
TRAF4-203ENST00000394925 SOX12O15370 315 aa30.34■■■□□ 2.45
TRAF4-203ENST00000394925 PPP1R1BQ9UD71 204 aaPredicted RBP30.34■■■□□ 2.45
TRAF4-203ENST00000394925 TTC21BQ7Z4L5 1316 aa30.33■■■□□ 2.45
TRAF4-203ENST00000394925 PLSCR1O15162 318 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms