RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 RGPD1P0DJD0 1748 aa29.43■■■□□ 2.3
POLR2J-202ENST00000393794 GPRASP1Q5JY77 1395 aa29.42■■■□□ 2.3
POLR2J-202ENST00000393794 EN1Q05925 392 aaPredicted RBP29.41■■■□□ 2.3
POLR2J-202ENST00000393794 EIF3AQ14152 1382 aaKnown RBP29.4■■■□□ 2.3
POLR2J-202ENST00000393794 WASLO00401 505 aaPredicted RBP29.4■■■□□ 2.3
POLR2J-202ENST00000393794 HIRIP3Q9BW71 556 aaPredicted RBP29.4■■■□□ 2.3
POLR2J-202ENST00000393794 TRAK1Q9UPV9 953 aa29.4■■■□□ 2.3
POLR2J-202ENST00000393794 TNS1Q9HBL0 1735 aaKnown RBP29.39■■■□□ 2.3
POLR2J-202ENST00000393794 A0A0G2JS52 829 aa29.37■■■□□ 2.29
POLR2J-202ENST00000393794 MYT1Q01538 1121 aa29.37■■■□□ 2.29
POLR2J-202ENST00000393794 FAM182BQ5T319 152 aa29.37■■■□□ 2.29
POLR2J-202ENST00000393794 MINK1Q8N4C8 1332 aaPredicted RBP29.37■■■□□ 2.29
POLR2J-202ENST00000393794 SPATA31A1Q5TZJ5 1347 aa29.34■■■□□ 2.29
POLR2J-202ENST00000393794 CAMKK2Q96RR4 588 aa29.32■■■□□ 2.28
POLR2J-202ENST00000393794 PRDM11Q9NQV5 511 aa29.31■■■□□ 2.28
POLR2J-202ENST00000393794 ATP7BP35670 1465 aa29.3■■■□□ 2.28
POLR2J-202ENST00000393794 R3HDM1Q15032 1099 aaKnown RBP29.3■■■□□ 2.28
POLR2J-202ENST00000393794 NGDNQ8NEJ9 315 aaKnown RBP29.3■■■□□ 2.28
POLR2J-202ENST00000393794 STAC3Q96MF2 364 aa29.3■■■□□ 2.28
POLR2J-202ENST00000393794 KIAA0232Q92628 1395 aa29.29■■■□□ 2.28
POLR2J-202ENST00000393794 EZH2Q15910 746 aaKnown RBP29.29■■■□□ 2.28
POLR2J-202ENST00000393794 FAM196AQ6ZSG2 479 aa29.26■■■□□ 2.27
POLR2J-202ENST00000393794 NUDT16Q96DE0 195 aaKnown RBP29.26■■■□□ 2.27
POLR2J-202ENST00000393794 PHRF1Q9P1Y6 1649 aaKnown RBP29.26■■■□□ 2.27
POLR2J-202ENST00000393794 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.27
POLR2J-202ENST00000393794 PAK3O75914 559 aaPredicted RBP29.25■■■□□ 2.27
POLR2J-202ENST00000393794 ITSN1Q15811 1721 aa29.25■■■□□ 2.27
POLR2J-202ENST00000393794 ARHGEF28Q8N1W1 1705 aaKnown RBP29.25■■■□□ 2.27
POLR2J-202ENST00000393794 DCAF11Q8TEB1 546 aa29.24■■■□□ 2.27
POLR2J-202ENST00000393794 KDM2AQ9Y2K7 1162 aa29.23■■■□□ 2.27
POLR2J-202ENST00000393794 POLR3AO14802 1390 aaPredicted RBP29.23■■■□□ 2.27
POLR2J-202ENST00000393794 PARD3Q8TEW0 1356 aa29.23■■■□□ 2.27
POLR2J-202ENST00000393794 CHRNA2Q15822 529 aa29.22■■■□□ 2.27
POLR2J-202ENST00000393794 BARGINQ6ZT62 677 aa29.22■■■□□ 2.27
POLR2J-202ENST00000393794 TRIM37O94972 964 aa29.21■■■□□ 2.27
POLR2J-202ENST00000393794 SSH2Q76I76 1423 aa29.18■■■□□ 2.26
POLR2J-202ENST00000393794 TOPAZ1Q8N9V7 1692 aa29.18■■■□□ 2.26
POLR2J-202ENST00000393794 RREB1Q92766 1687 aa29.18■■■□□ 2.26
POLR2J-202ENST00000393794 PLEKHG3A1L390 1219 aa29.17■■■□□ 2.26
POLR2J-202ENST00000393794 CAMTA1Q9Y6Y1 1673 aa29.17■■■□□ 2.26
POLR2J-202ENST00000393794 ZC3H6P61129 1189 aaKnown RBP29.16■■■□□ 2.26
POLR2J-202ENST00000393794 NBPF8Q3BBV2 869 aa29.16■■■□□ 2.26
POLR2J-202ENST00000393794 CDK19Q9BWU1 502 aa29.16■■■□□ 2.26
POLR2J-202ENST00000393794 STRN4Q9NRL3 753 aa29.16■■■□□ 2.26
POLR2J-202ENST00000393794 LMO7Q8WWI1 1683 aa29.15■■■□□ 2.26
POLR2J-202ENST00000393794 CPDO75976 1380 aa29.15■■■□□ 2.26
POLR2J-202ENST00000393794 APBA3O96018 575 aa29.15■■■□□ 2.26
POLR2J-202ENST00000393794 ACEP12821 1306 aa29.15■■■□□ 2.26
POLR2J-202ENST00000393794 CCDC61Q9Y6R9 512 aa29.14■■■□□ 2.26
POLR2J-202ENST00000393794 NRKQ7Z2Y5 1582 aa29.13■■■□□ 2.25
POLR2J-202ENST00000393794 USP19O94966 1318 aa29.13■■■□□ 2.25
POLR2J-202ENST00000393794 NUP188Q5SRE5 1749 aa29.12■■■□□ 2.25
POLR2J-202ENST00000393794 NUTM2GQ5VZR2 741 aa29.11■■■□□ 2.25
POLR2J-202ENST00000393794 LARP1Q6PKG0 1096 aaKnown RBP29.1■■■□□ 2.25
POLR2J-202ENST00000393794 TCP11L2Q8N4U5 519 aa29.08■■■□□ 2.25
POLR2J-202ENST00000393794 USP35Q9P2H5 1018 aa29.08■■■□□ 2.25
POLR2J-202ENST00000393794 THRAP3Q9Y2W1 955 aaKnown RBP29.08■■■□□ 2.25
POLR2J-202ENST00000393794 PDE3BQ13370 1112 aa29.07■■■□□ 2.24
POLR2J-202ENST00000393794 EVA1CP58658 441 aa29.06■■■□□ 2.24
POLR2J-202ENST00000393794 PARP4Q9UKK3 1724 aaKnown RBP29.05■■■□□ 2.24
POLR2J-202ENST00000393794 KIAA1210Q9ULL0 1709 aa29.05■■■□□ 2.24
POLR2J-202ENST00000393794 ABTB2Q8N961 1025 aa29.04■■■□□ 2.24
POLR2J-202ENST00000393794 GCP02774 474 aa29.02■■■□□ 2.24
POLR2J-202ENST00000393794 PEAK1Q9H792 1746 aa29.01■■■□□ 2.23
POLR2J-202ENST00000393794 COL5A2P05997 1499 aaPredicted RBP29.01■■■□□ 2.23
POLR2J-202ENST00000393794 NBPF14Q5TI25 921 aa29■■■□□ 2.23
POLR2J-202ENST00000393794 BRD4O60885 1362 aaPredicted RBP28.99■■■□□ 2.23
POLR2J-202ENST00000393794 C11orf95C9JLR9 678 aaPredicted RBP28.98■■■□□ 2.23
POLR2J-202ENST00000393794 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
POLR2J-202ENST00000393794 NBPF1Q3BBV0 1214 aa28.96■■■□□ 2.23
POLR2J-202ENST00000393794 RGPD3A6NKT7 1758 aaPredicted RBP28.96■■■□□ 2.23
POLR2J-202ENST00000393794 RGPD4Q7Z3J3 1758 aa28.96■■■□□ 2.23
POLR2J-202ENST00000393794 CRB1P82279 1406 aa28.94■■■□□ 2.22
POLR2J-202ENST00000393794 SBF2Q86WG5 1849 aa28.94■■■□□ 2.22
POLR2J-202ENST00000393794 PLSCR1O15162 318 aa28.94■■■□□ 2.22
POLR2J-202ENST00000393794 PPIP5K1Q6PFW1 1433 aa28.94■■■□□ 2.22
POLR2J-202ENST00000393794 AATKQ6ZMQ8 1374 aa28.93■■■□□ 2.22
POLR2J-202ENST00000393794 KCNQ2O43526 872 aa28.93■■■□□ 2.22
POLR2J-202ENST00000393794 SPON1Q9HCB6 807 aa28.93■■■□□ 2.22
POLR2J-202ENST00000393794 COL18A1P39060 1754 aa28.91■■■□□ 2.22
POLR2J-202ENST00000393794 SLIT3O75094 1523 aa28.91■■■□□ 2.22
POLR2J-202ENST00000393794 OVOS2A0A0G2JMS6 1433 aa28.91■■■□□ 2.22
POLR2J-202ENST00000393794 OVOS2A0A0J9YW53 1432 aa28.91■■■□□ 2.22
POLR2J-202ENST00000393794 OVOS2Q6IE36 1432 aa28.91■■■□□ 2.22
POLR2J-202ENST00000393794 YY1P25490 414 aa28.89■■■□□ 2.22
POLR2J-202ENST00000393794 NINLQ9Y2I6 1382 aa28.88■■■□□ 2.21
POLR2J-202ENST00000393794 BCL9O00512 1426 aa28.88■■■□□ 2.21
POLR2J-202ENST00000393794 USP6P35125 1406 aa28.88■■■□□ 2.21
POLR2J-202ENST00000393794 LRRC37A3O60309 1634 aa28.88■■■□□ 2.21
POLR2J-202ENST00000393794 CABP2Q9NPB3 220 aa28.87■■■□□ 2.21
POLR2J-202ENST00000393794 CENPJQ9HC77 1338 aaPredicted RBP28.87■■■□□ 2.21
POLR2J-202ENST00000393794 CASZ1Q86V15 1759 aa28.85■■■□□ 2.21
POLR2J-202ENST00000393794 SRPK2P78362 688 aaKnown RBP28.85■■■□□ 2.21
POLR2J-202ENST00000393794 PTF1AQ7RTS3 328 aa28.85■■■□□ 2.21
POLR2J-202ENST00000393794 PROM2Q8N271 834 aa28.85■■■□□ 2.21
POLR2J-202ENST00000393794 BCL11BQ9C0K0 894 aaPredicted RBP28.84■■■□□ 2.21
POLR2J-202ENST00000393794 ANO8Q9HCE9 1232 aaPredicted RBP28.84■■■□□ 2.21
POLR2J-202ENST00000393794 NLRP6P59044 892 aa28.83■■■□□ 2.21
POLR2J-202ENST00000393794 CABP1Q9NZU7 370 aa28.83■■■□□ 2.21
POLR2J-202ENST00000393794 AXIN2Q9Y2T1 843 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms