RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 NUP160Q12769 1436 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 ASXL2Q76L83 1435 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 RUSC2Q8N2Y8 1516 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 TOP2BQ02880 1626 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 STK25O00506 426 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 CEBPAP49715 358 aaPredicted RBP3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 NUDT18Q6ZVK8 323 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 FBXO41Q8TF61 875 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 FBXO3Q9UK99 471 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 ADGRL1O94910 1474 aa3.2□□□□□ -1.9
SNORA40.18-201ENST00000391200 SHROOM2Q13796 1616 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 ZMYM1Q5SVZ6 1142 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 ILDR2Q71H61 639 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 COL25A1Q9BXS0 654 aaPredicted RBP3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 CRISPLD2Q9H0B8 497 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 FCF1Q9Y324 198 aaKnown RBP3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 TNIKQ9UKE5 1360 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 ADAMTS12P58397 1594 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 BIVM-ERCC5R4GMW8 1640 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 KIAA0586Q9BVV6 1533 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 CARMIL2Q6F5E8 1435 aa3.19□□□□□ -1.9
SNORA40.18-201ENST00000391200 DIP2BQ9P265 1576 aa3.18□□□□□ -1.9
SNORA40.18-201ENST00000391200 FKBP8Q14318 412 aa3.18□□□□□ -1.9
SNORA40.18-201ENST00000391200 CFAP65Q6ZU64 1925 aaKnown RBP3.18□□□□□ -1.9
SNORA40.18-201ENST00000391200 ERICH3Q5RHP9 1530 aa3.18□□□□□ -1.9
SNORA40.18-201ENST00000391200 CD109Q6YHK3 1445 aa3.18□□□□□ -1.9
SNORA40.18-201ENST00000391200 KIF27Q86VH2 1401 aa3.18□□□□□ -1.9
SNORA40.18-201ENST00000391200 PLEKHD1A6NEE1 506 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 PRSS12P56730 875 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 LYPD4Q6UWN0 246 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 CERKQ8TCT0 537 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 UACAQ9BZF9 1416 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 PPRC1Q5VV67 1664 aaKnown RBP3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 NCKAP5LQ9HCH0 1330 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 HECW2Q9P2P5 1572 aa3.17□□□□□ -1.9
SNORA40.18-201ENST00000391200 PLB1Q6P1J6 1458 aa3.16□□□□□ -1.9
SNORA40.18-201ENST00000391200 KRBA1A5PL33 1030 aa3.16□□□□□ -1.9
SNORA40.18-201ENST00000391200 CAPN5O15484 640 aaPredicted RBP3.16□□□□□ -1.9
SNORA40.18-201ENST00000391200 UBTFP17480 764 aaKnown RBP3.16□□□□□ -1.9
SNORA40.18-201ENST00000391200 HDGFP51858 240 aaKnown RBP3.16□□□□□ -1.9
SNORA40.18-201ENST00000391200 ZCCHC11Q5TAX3 1644 aaKnown RBP3.15□□□□□ -1.9
SNORA40.18-201ENST00000391200 DISP3Q9P2K9 1392 aa3.15□□□□□ -1.9
SNORA40.18-201ENST00000391200 FZD5Q13467 585 aa3.15□□□□□ -1.91
SNORA40.18-201ENST00000391200 SLF2Q8IX21 1173 aa3.15□□□□□ -1.91
SNORA40.18-201ENST00000391200 EPAS1Q99814 870 aa3.15□□□□□ -1.91
SNORA40.18-201ENST00000391200 KIF21BO75037 1637 aa3.15□□□□□ -1.91
SNORA40.18-201ENST00000391200 MAPKBP1O60336 1514 aa3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 EPRSP07814 1512 aaKnown RBP3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 ABCC2Q92887 1545 aa3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 SCUBE3Q8IX30 993 aa3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 AFAP1Q8N556 730 aa3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 ESF1Q9H501 851 aaKnown RBP3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 ZNF777Q9ULD5 760 aaPredicted RBP3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 SETD1BQ9UPS6 1966 aaKnown RBP3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 DISP1Q96F81 1524 aa3.14□□□□□ -1.91
SNORA40.18-201ENST00000391200 IQGAP2Q13576 1575 aa3.13□□□□□ -1.91
SNORA40.18-201ENST00000391200 PIP4K2BP78356 416 aa3.13□□□□□ -1.91
SNORA40.18-201ENST00000391200 PURBQ96QR8 312 aaKnown RBP3.13□□□□□ -1.91
SNORA40.18-201ENST00000391200 RAPGEF2Q9Y4G8 1499 aa3.13□□□□□ -1.91
SNORA40.18-201ENST00000391200 MAP3K4Q9Y6R4 1608 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 ATP10BO94823 1461 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 TEX14Q8IWB6 1497 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 LMTK3Q96Q04 1460 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 NBPF26B4DH59 902 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 SOCS7O14512 581 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 ACTN4O43707 911 aaKnown RBP3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 PRIM1P49642 420 aaKnown RBP3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 DDX12PQ92771 950 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 SPSB2Q99619 263 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 SEMA6BQ9H3T3 888 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 GLI2P10070 1586 aa3.12□□□□□ -1.91
SNORA40.18-201ENST00000391200 RIMS1Q86UR5 1692 aaKnown RBP3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 PTPRMP28827 1452 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 KDM5BQ9UGL1 1544 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 SCO2A0A1W2PP80 73 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 UBAP1LF5GYI3 381 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 ALDH1A1P00352 501 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 HNRNPMP52272 730 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 EFCAB2Q5VUJ9 269 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 GGT6Q6P531 493 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 FAM160A2Q8N612 972 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 PRDM9Q9NQV7 894 aa3.11□□□□□ -1.91
SNORA40.18-201ENST00000391200 UHRF1BP1LA0JNW5 1464 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 WDR7Q9Y4E6 1490 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 YBX3P16989 372 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 SKOR1P84550 965 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 EN1Q05925 392 aaPredicted RBP3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 PUS10Q3MIT2 529 aaKnown RBP3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 NECTIN2Q92692 538 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 ZFP64Q9NPA5 681 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 CFAP43Q8NDM7 1665 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 CTTNBP2Q8WZ74 1663 aa3.1□□□□□ -1.91
SNORA40.18-201ENST00000391200 MAP3K7O43318 606 aa3.09□□□□□ -1.91
SNORA40.18-201ENST00000391200 CELA2BP08218 269 aaPredicted RBP3.09□□□□□ -1.91
SNORA40.18-201ENST00000391200 TRIM32Q13049 653 aa3.09□□□□□ -1.91
SNORA40.18-201ENST00000391200 ARTNQ5T4W7 220 aa3.09□□□□□ -1.91
SNORA40.18-201ENST00000391200 PRR14Q9BWN1 585 aa3.09□□□□□ -1.91
SNORA40.18-201ENST00000391200 AKNAQ7Z591 1439 aa3.09□□□□□ -1.92
SNORA40.18-201ENST00000391200 UGGT2Q9NYU1 1516 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms