RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 SIRT1Q96EB6 747 aa14.53□□□□□ -0.08
TRAV18-201ENST00000390446 ADGRB2O60241 1585 aa14.51□□□□□ -0.09
TRAV18-201ENST00000390446 NRXN1Q9ULB1 1477 aa14.51□□□□□ -0.09
TRAV18-201ENST00000390446 DISP2A7MBM2 1401 aa14.5□□□□□ -0.09
TRAV18-201ENST00000390446 RGPD8O14715 1765 aaPredicted RBP14.5□□□□□ -0.09
TRAV18-201ENST00000390446 PARD3Q8TEW0 1356 aa14.5□□□□□ -0.09
TRAV18-201ENST00000390446 KCNQ2O43526 872 aa14.5□□□□□ -0.09
TRAV18-201ENST00000390446 HIRIP3Q9BW71 556 aaPredicted RBP14.5□□□□□ -0.09
TRAV18-201ENST00000390446 CHRNA2Q15822 529 aa14.49□□□□□ -0.09
TRAV18-201ENST00000390446 CFAP70Q5T0N1 1121 aa14.49□□□□□ -0.09
TRAV18-201ENST00000390446 COL14A1Q05707 1796 aaKnown RBP14.49□□□□□ -0.09
TRAV18-201ENST00000390446 SPATA31A1Q5TZJ5 1347 aa14.48□□□□□ -0.09
TRAV18-201ENST00000390446 C14orf93Q9H972 538 aaKnown RBP14.48□□□□□ -0.09
TRAV18-201ENST00000390446 IFT172Q9UG01 1749 aa14.48□□□□□ -0.09
TRAV18-201ENST00000390446 KNDC1Q76NI1 1749 aa14.47□□□□□ -0.09
TRAV18-201ENST00000390446 ABCA3Q99758 1704 aa14.47□□□□□ -0.09
TRAV18-201ENST00000390446 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
TRAV18-201ENST00000390446 NRAPQ86VF7 1730 aa14.46□□□□□ -0.09
TRAV18-201ENST00000390446 MINK1Q8N4C8 1332 aaPredicted RBP14.46□□□□□ -0.09
TRAV18-201ENST00000390446 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.09
TRAV18-201ENST00000390446 PIK3C2GO75747 1445 aa14.46□□□□□ -0.09
TRAV18-201ENST00000390446 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
TRAV18-201ENST00000390446 NUTM2GQ5VZR2 741 aa14.45□□□□□ -0.1
TRAV18-201ENST00000390446 ANKARQ7Z5J8 1434 aa14.45□□□□□ -0.1
TRAV18-201ENST00000390446 TNS1Q9HBL0 1735 aaKnown RBP14.45□□□□□ -0.1
TRAV18-201ENST00000390446 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
TRAV18-201ENST00000390446 EIF3AQ14152 1382 aaKnown RBP14.44□□□□□ -0.1
TRAV18-201ENST00000390446 KIAA0232Q92628 1395 aa14.44□□□□□ -0.1
TRAV18-201ENST00000390446 NINLQ9Y2I6 1382 aa14.44□□□□□ -0.1
TRAV18-201ENST00000390446 MPHOSPH9Q99550 1183 aa14.43□□□□□ -0.1
TRAV18-201ENST00000390446 SPATA31E1Q6ZUB1 1445 aa14.42□□□□□ -0.1
TRAV18-201ENST00000390446 THSD7AQ9UPZ6 1657 aa14.42□□□□□ -0.1
TRAV18-201ENST00000390446 BARGINQ6ZT62 677 aa14.41□□□□□ -0.1
TRAV18-201ENST00000390446 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
TRAV18-201ENST00000390446 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
TRAV18-201ENST00000390446 WASLO00401 505 aaPredicted RBP14.4□□□□□ -0.1
TRAV18-201ENST00000390446 ZNF784Q8NCA9 323 aaPredicted RBP14.4□□□□□ -0.1
TRAV18-201ENST00000390446 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
TRAV18-201ENST00000390446 C11orf95C9JLR9 678 aaPredicted RBP14.39□□□□□ -0.11
TRAV18-201ENST00000390446 LARP1Q6PKG0 1096 aaKnown RBP14.39□□□□□ -0.11
TRAV18-201ENST00000390446 ZBTB7AO95365 584 aa14.38□□□□□ -0.11
TRAV18-201ENST00000390446 PRR36Q9H6K5 1346 aa14.38□□□□□ -0.11
TRAV18-201ENST00000390446 ALS2Q96Q42 1657 aa14.37□□□□□ -0.11
TRAV18-201ENST00000390446 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
TRAV18-201ENST00000390446 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
TRAV18-201ENST00000390446 TRPM3Q9HCF6 1732 aaPredicted RBP14.37□□□□□ -0.11
TRAV18-201ENST00000390446 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
TRAV18-201ENST00000390446 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
TRAV18-201ENST00000390446 NUDT16Q96DE0 195 aaKnown RBP14.36□□□□□ -0.11
TRAV18-201ENST00000390446 THRAP3Q9Y2W1 955 aaKnown RBP14.36□□□□□ -0.11
TRAV18-201ENST00000390446 NUP188Q5SRE5 1749 aa14.35□□□□□ -0.11
TRAV18-201ENST00000390446 RREB1Q92766 1687 aa14.34□□□□□ -0.11
TRAV18-201ENST00000390446 C1QTNF8P60827 252 aa14.34□□□□□ -0.11
TRAV18-201ENST00000390446 STK32BQ9NY57 414 aa14.34□□□□□ -0.11
TRAV18-201ENST00000390446 TULP4Q9NRJ4 1543 aa14.34□□□□□ -0.11
TRAV18-201ENST00000390446 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
TRAV18-201ENST00000390446 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.12
TRAV18-201ENST00000390446 PLSCR1O15162 318 aa14.32□□□□□ -0.12
TRAV18-201ENST00000390446 DDB1Q16531 1140 aa14.32□□□□□ -0.12
TRAV18-201ENST00000390446 IFFO2Q5TF58 517 aa14.32□□□□□ -0.12
TRAV18-201ENST00000390446 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
TRAV18-201ENST00000390446 FHDC1Q9C0D6 1143 aaPredicted RBP14.31□□□□□ -0.12
TRAV18-201ENST00000390446 TOM1L2Q6ZVM7 507 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 DCAF11Q8TEB1 546 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 SYT17Q9BSW7 474 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 CDK19Q9BWU1 502 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 PDGFDQ9GZP0 370 aaPredicted RBP14.3□□□□□ -0.12
TRAV18-201ENST00000390446 ANO8Q9HCE9 1232 aaPredicted RBP14.3□□□□□ -0.12
TRAV18-201ENST00000390446 ACEP12821 1306 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 OVOS2A0A0G2JMS6 1433 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 OVOS2A0A0J9YW53 1432 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 OVOS2Q6IE36 1432 aa14.3□□□□□ -0.12
TRAV18-201ENST00000390446 GPR162Q16538 588 aa14.29□□□□□ -0.12
TRAV18-201ENST00000390446 ATP7BP35670 1465 aa14.29□□□□□ -0.12
TRAV18-201ENST00000390446 GCP02774 474 aa14.28□□□□□ -0.12
TRAV18-201ENST00000390446 NRKQ7Z2Y5 1582 aa14.28□□□□□ -0.12
TRAV18-201ENST00000390446 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
TRAV18-201ENST00000390446 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
TRAV18-201ENST00000390446 CRYBG1Q9Y4K1 1723 aa14.27□□□□□ -0.12
TRAV18-201ENST00000390446 GIGYF1O75420 1035 aaPredicted RBP14.27□□□□□ -0.13
TRAV18-201ENST00000390446 CCDC61Q9Y6R9 512 aa14.27□□□□□ -0.13
TRAV18-201ENST00000390446 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
TRAV18-201ENST00000390446 PTGER2P43116 358 aa14.26□□□□□ -0.13
TRAV18-201ENST00000390446 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
TRAV18-201ENST00000390446 CRB1P82279 1406 aa14.25□□□□□ -0.13
TRAV18-201ENST00000390446 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
TRAV18-201ENST00000390446 SLC15A2Q16348 729 aa14.25□□□□□ -0.13
TRAV18-201ENST00000390446 TXNRD1Q16881 649 aa14.25□□□□□ -0.13
TRAV18-201ENST00000390446 PTF1AQ7RTS3 328 aa14.25□□□□□ -0.13
TRAV18-201ENST00000390446 CPDO75976 1380 aa14.24□□□□□ -0.13
TRAV18-201ENST00000390446 NLRP6P59044 892 aa14.24□□□□□ -0.13
TRAV18-201ENST00000390446 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
TRAV18-201ENST00000390446 ARXQ96QS3 562 aa14.24□□□□□ -0.13
TRAV18-201ENST00000390446 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
TRAV18-201ENST00000390446 PROM2Q8N271 834 aa14.23□□□□□ -0.13
TRAV18-201ENST00000390446 PLEKHG3A1L390 1219 aa14.22□□□□□ -0.13
TRAV18-201ENST00000390446 EXOC5O00471 708 aa14.22□□□□□ -0.13
TRAV18-201ENST00000390446 MARCH10Q8NA82 808 aaPredicted RBP14.22□□□□□ -0.13
TRAV18-201ENST00000390446 CDCA7Q9BWT1 371 aaPredicted RBP14.22□□□□□ -0.13
TRAV18-201ENST00000390446 MYOM1P52179 1685 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms