RNA–Protein interactions for RNA: ENST00000389939.2

MS4A1-202, Transcript of membrane spanning 4-domains A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A1, Length 3,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1-202ENST00000389939 U2AF1Q01081 240 aaKnown RBP eCLIP5.5□□□□□ -1.53
MS4A1-202ENST00000389939 PPARDQ03181 441 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 SAFB2Q14151 953 aaKnown RBP eCLIP5.5□□□□□ -1.53
MS4A1-202ENST00000389939 KLHL40Q2TBA0 621 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 GIMAP6Q6P9H5 292 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 ZNF428Q96B54 188 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 FAM212AQ96EL1 285 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 BRD4O60885 1362 aaPredicted RBP5.5□□□□□ -1.53
MS4A1-202ENST00000389939 GADD45BO75293 160 aaPredicted RBP5.5□□□□□ -1.53
MS4A1-202ENST00000389939 HMGN5P82970 282 aaKnown RBP5.5□□□□□ -1.53
MS4A1-202ENST00000389939 LRMPQ12912 555 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 RAB3GAP1Q15042 981 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 NBPF20Q3BBV1 942 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 GPT2Q8TD30 523 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 UPF3BQ9BZI7 483 aaKnown RBP5.5□□□□□ -1.53
MS4A1-202ENST00000389939 TRIM66O15016 1216 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 NEK4P51957 841 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 TSHZ3Q63HK5 1081 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 UACAQ9BZF9 1416 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 UHRF1BP1LA0JNW5 1464 aa5.5□□□□□ -1.53
MS4A1-202ENST00000389939 TULP2O00295 520 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 CLSTN1O94985 981 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 PTGS1P23219 599 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 PPP2R1AP30153 589 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 FILIP1Q7Z7B0 1213 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 RABEP2Q9H5N1 569 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 DIAPH3Q9NSV4 1193 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 SYNJ1O43426 1573 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
MS4A1-202ENST00000389939 DZIP1LQ8IYY4 767 aaKnown RBP5.49□□□□□ -1.53
MS4A1-202ENST00000389939 CCDC112Q8NEF3 446 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
MS4A1-202ENST00000389939 ZNF500O60304 480 aaPredicted RBP5.49□□□□□ -1.53
MS4A1-202ENST00000389939 CKAP2LQ8IYA6 745 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 C16orf71Q8IYS4 520 aaPredicted RBP5.49□□□□□ -1.53
MS4A1-202ENST00000389939 SLC52A1Q9NWF4 448 aa5.49□□□□□ -1.53
MS4A1-202ENST00000389939 KIF16BQ96L93 1317 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 PPFIA3O75145 1194 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 NPM1P06748 294 aaKnown RBP eCLIP5.48□□□□□ -1.53
MS4A1-202ENST00000389939 HNRNPH2P55795 449 aaKnown RBP5.48□□□□□ -1.53
MS4A1-202ENST00000389939 CARD10Q9BWT7 1032 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 TRIM5Q9C035 493 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 LMBRD1Q9NUN5 540 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 YEATS2Q9ULM3 1422 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 SETQ01105 290 aaPredicted RBP5.48□□□□□ -1.53
MS4A1-202ENST00000389939 FERMT3Q86UX7 667 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 PLEKHA4Q9H4M7 779 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 ZCCHC17Q9NP64 241 aaKnown RBP5.48□□□□□ -1.53
MS4A1-202ENST00000389939 SHROOM2Q13796 1616 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 ERICH3Q5RHP9 1530 aa5.48□□□□□ -1.53
MS4A1-202ENST00000389939 LRSAM1Q6UWE0 723 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 TBC1D9Q6ZT07 1266 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 CCDC186Q7Z3E2 898 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 CCDC34Q96HJ3 373 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 FMNL2Q96PY5 1086 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 ZSWIM4Q9H7M6 989 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 A0A087WWV3 80 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 VPS37CA5D8V6 355 aaPredicted RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 CAPN2P17655 700 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 TMF1P82094 1093 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 CEBPZQ03701 1054 aaKnown RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 EXOSC9Q06265 439 aaKnown RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 ELF2Q15723 593 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 TCP11L2Q8N4U5 519 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 RILPL2Q969X0 211 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 LRRC9Q6ZRR7 1453 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 ECM2O94769 699 aaPredicted RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 TMEM57Q8N5G2 664 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 PRPF38AQ8NAV1 312 aaKnown RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 NOL10Q9BSC4 688 aaKnown RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 NRBP1Q9UHY1 535 aa5.47□□□□□ -1.53
MS4A1-202ENST00000389939 NOB1Q9ULX3 412 aaKnown RBP5.47□□□□□ -1.53
MS4A1-202ENST00000389939 GOLGA6L4A6NEF3 574 aa5.46□□□□□ -1.53
MS4A1-202ENST00000389939 RARSP54136 660 aaKnown RBP5.46□□□□□ -1.53
MS4A1-202ENST00000389939 FAM193AP78312 1265 aa5.46□□□□□ -1.53
MS4A1-202ENST00000389939 NUCB2P80303 420 aa5.46□□□□□ -1.53
MS4A1-202ENST00000389939 ISM2Q6H9L7 571 aa5.46□□□□□ -1.53
MS4A1-202ENST00000389939 KRBA2Q6ZNG9 492 aa5.46□□□□□ -1.53
MS4A1-202ENST00000389939 BANK1Q8NDB2 785 aa5.46□□□□□ -1.53
MS4A1-202ENST00000389939 ZNF692Q9BU19 519 aaPredicted RBP5.46□□□□□ -1.53
MS4A1-202ENST00000389939 MAP4K4O95819 1239 aaPredicted RBP5.46□□□□□ -1.54
MS4A1-202ENST00000389939 LMAN1P49257 510 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 CCDC191Q8NCU4 936 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 SP7Q8TDD2 431 aaPredicted RBP5.46□□□□□ -1.54
MS4A1-202ENST00000389939 CALCOCO1Q9P1Z2 691 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 HMGXB3Q12766 1538 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 NLRP1Q9C000 1473 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 PHACTR2O75167 634 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 FAM173BQ6P4H8 233 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 MORC1Q86VD1 984 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 HOMER1Q86YM7 354 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 KRT222Q8N1A0 295 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 SYAP1Q96A49 352 aaPredicted RBP5.46□□□□□ -1.54
MS4A1-202ENST00000389939 EPC1Q9H2F5 836 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 OGFRQ9NZT2 677 aa5.46□□□□□ -1.54
MS4A1-202ENST00000389939 AK9Q5TCS8 1911 aa5.45□□□□□ -1.54
MS4A1-202ENST00000389939 ZMYM3Q14202 1370 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms