RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 GPRASP1Q5JY77 1395 aa14.42□□□□□ -0.1
IFT88-203ENST00000389373 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 ABCA3Q99758 1704 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 CHRNA2Q15822 529 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
IFT88-203ENST00000389373 NRAPQ86VF7 1730 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 DISP2A7MBM2 1401 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
IFT88-203ENST00000389373 NGDNQ8NEJ9 315 aaKnown RBP14.4□□□□□ -0.1
IFT88-203ENST00000389373 PDE3BQ13370 1112 aa14.39□□□□□ -0.11
IFT88-203ENST00000389373 SPATA31E1Q6ZUB1 1445 aa14.39□□□□□ -0.11
IFT88-203ENST00000389373 ACIN1Q9UKV3 1341 aaKnown RBP14.39□□□□□ -0.11
IFT88-203ENST00000389373 COL14A1Q05707 1796 aaKnown RBP14.38□□□□□ -0.11
IFT88-203ENST00000389373 EVA1CP58658 441 aa14.38□□□□□ -0.11
IFT88-203ENST00000389373 SPON1Q9HCB6 807 aa14.38□□□□□ -0.11
IFT88-203ENST00000389373 SPATA31A1Q5TZJ5 1347 aa14.38□□□□□ -0.11
IFT88-203ENST00000389373 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
IFT88-203ENST00000389373 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
IFT88-203ENST00000389373 MPHOSPH9Q99550 1183 aa14.37□□□□□ -0.11
IFT88-203ENST00000389373 TRAK1Q9UPV9 953 aa14.37□□□□□ -0.11
IFT88-203ENST00000389373 TNS1Q9HBL0 1735 aaKnown RBP14.36□□□□□ -0.11
IFT88-203ENST00000389373 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
IFT88-203ENST00000389373 KCNQ2O43526 872 aa14.36□□□□□ -0.11
IFT88-203ENST00000389373 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
IFT88-203ENST00000389373 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
IFT88-203ENST00000389373 ADGRB2O60241 1585 aa14.35□□□□□ -0.11
IFT88-203ENST00000389373 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
IFT88-203ENST00000389373 THSD7AQ9UPZ6 1657 aa14.34□□□□□ -0.11
IFT88-203ENST00000389373 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
IFT88-203ENST00000389373 TRPM3Q9HCF6 1732 aaPredicted RBP14.32□□□□□ -0.12
IFT88-203ENST00000389373 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
IFT88-203ENST00000389373 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
IFT88-203ENST00000389373 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
IFT88-203ENST00000389373 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
IFT88-203ENST00000389373 EIF3AQ14152 1382 aaKnown RBP14.3□□□□□ -0.12
IFT88-203ENST00000389373 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
IFT88-203ENST00000389373 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
IFT88-203ENST00000389373 NINLQ9Y2I6 1382 aa14.28□□□□□ -0.12
IFT88-203ENST00000389373 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
IFT88-203ENST00000389373 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
IFT88-203ENST00000389373 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.13
IFT88-203ENST00000389373 DLC1Q96QB1 1528 aa14.26□□□□□ -0.13
IFT88-203ENST00000389373 TULP4Q9NRJ4 1543 aa14.26□□□□□ -0.13
IFT88-203ENST00000389373 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
IFT88-203ENST00000389373 RREB1Q92766 1687 aa14.26□□□□□ -0.13
IFT88-203ENST00000389373 SENP3-EIF4A1A0A087X0R7 540 aa14.25□□□□□ -0.13
IFT88-203ENST00000389373 ZBTB7AO95365 584 aa14.25□□□□□ -0.13
IFT88-203ENST00000389373 ZNF784Q8NCA9 323 aaPredicted RBP14.25□□□□□ -0.13
IFT88-203ENST00000389373 BCL11BQ9C0K0 894 aaPredicted RBP14.25□□□□□ -0.13
IFT88-203ENST00000389373 ABTB2Q8N961 1025 aa14.24□□□□□ -0.13
IFT88-203ENST00000389373 ATF5Q9Y2D1 282 aaPredicted RBP14.24□□□□□ -0.13
IFT88-203ENST00000389373 PDGFDQ9GZP0 370 aaPredicted RBP14.23□□□□□ -0.13
IFT88-203ENST00000389373 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
IFT88-203ENST00000389373 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
IFT88-203ENST00000389373 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
IFT88-203ENST00000389373 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
IFT88-203ENST00000389373 ACEP12821 1306 aa14.22□□□□□ -0.13
IFT88-203ENST00000389373 DCAF11Q8TEB1 546 aa14.22□□□□□ -0.13
IFT88-203ENST00000389373 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
IFT88-203ENST00000389373 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
IFT88-203ENST00000389373 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
IFT88-203ENST00000389373 PLSCR1O15162 318 aa14.2□□□□□ -0.14
IFT88-203ENST00000389373 PTF1AQ7RTS3 328 aa14.2□□□□□ -0.14
IFT88-203ENST00000389373 ATP7BP35670 1465 aa14.19□□□□□ -0.14
IFT88-203ENST00000389373 ADGRB1O14514 1584 aa14.19□□□□□ -0.14
IFT88-203ENST00000389373 GCP02774 474 aa14.19□□□□□ -0.14
IFT88-203ENST00000389373 DDB1Q16531 1140 aa14.19□□□□□ -0.14
IFT88-203ENST00000389373 OVOS2A0A0G2JMS6 1433 aa14.18□□□□□ -0.14
IFT88-203ENST00000389373 OVOS2A0A0J9YW53 1432 aa14.18□□□□□ -0.14
IFT88-203ENST00000389373 OVOS2Q6IE36 1432 aa14.18□□□□□ -0.14
IFT88-203ENST00000389373 NLRP13Q86W25 1043 aa14.18□□□□□ -0.14
IFT88-203ENST00000389373 FHDC1Q9C0D6 1143 aaPredicted RBP14.18□□□□□ -0.14
IFT88-203ENST00000389373 NRKQ7Z2Y5 1582 aa14.17□□□□□ -0.14
IFT88-203ENST00000389373 C1QTNF8P60827 252 aa14.17□□□□□ -0.14
IFT88-203ENST00000389373 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
IFT88-203ENST00000389373 SYT17Q9BSW7 474 aa14.17□□□□□ -0.14
IFT88-203ENST00000389373 STK32BQ9NY57 414 aa14.17□□□□□ -0.14
IFT88-203ENST00000389373 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
IFT88-203ENST00000389373 PTGER2P43116 358 aa14.16□□□□□ -0.14
IFT88-203ENST00000389373 PROM2Q8N271 834 aa14.16□□□□□ -0.14
IFT88-203ENST00000389373 CPDO75976 1380 aa14.16□□□□□ -0.14
IFT88-203ENST00000389373 CRB1P82279 1406 aa14.15□□□□□ -0.14
IFT88-203ENST00000389373 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
IFT88-203ENST00000389373 PLEKHG3A1L390 1219 aa14.14□□□□□ -0.15
IFT88-203ENST00000389373 USP19O94966 1318 aa14.14□□□□□ -0.15
IFT88-203ENST00000389373 COL5A2P05997 1499 aaPredicted RBP14.13□□□□□ -0.15
IFT88-203ENST00000389373 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
IFT88-203ENST00000389373 SLC15A2Q16348 729 aa14.13□□□□□ -0.15
IFT88-203ENST00000389373 TXNRD1Q16881 649 aa14.13□□□□□ -0.15
IFT88-203ENST00000389373 MARCH10Q8NA82 808 aaPredicted RBP14.13□□□□□ -0.15
IFT88-203ENST00000389373 NLRP6P59044 892 aa14.12□□□□□ -0.15
IFT88-203ENST00000389373 SRPK2P78362 688 aaKnown RBP14.12□□□□□ -0.15
IFT88-203ENST00000389373 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
IFT88-203ENST00000389373 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
IFT88-203ENST00000389373 MYOM1P52179 1685 aa14.11□□□□□ -0.15
IFT88-203ENST00000389373 LMO7Q8WWI1 1683 aa14.11□□□□□ -0.15
IFT88-203ENST00000389373 GPR162Q16538 588 aa14.11□□□□□ -0.15
IFT88-203ENST00000389373 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
IFT88-203ENST00000389373 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms