RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
NEK4-202ENST00000383721 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
NEK4-202ENST00000383721 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
NEK4-202ENST00000383721 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
NEK4-202ENST00000383721 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
NEK4-202ENST00000383721 TECPR2O15040 1411 aa17.94■□□□□ 0.46
NEK4-202ENST00000383721 RGS3P49796 1198 aa17.92■□□□□ 0.46
NEK4-202ENST00000383721 PDE3AQ14432 1141 aa17.92■□□□□ 0.46
NEK4-202ENST00000383721 RUNDC1Q96C34 613 aa17.92■□□□□ 0.46
NEK4-202ENST00000383721 NWD1Q149M9 1564 aa17.92■□□□□ 0.46
NEK4-202ENST00000383721 CPS1P31327 1500 aa17.92■□□□□ 0.46
NEK4-202ENST00000383721 POGKQ9P215 609 aa17.92■□□□□ 0.46
NEK4-202ENST00000383721 KNDC1Q76NI1 1749 aa17.91■□□□□ 0.46
NEK4-202ENST00000383721 RRP7AQ9Y3A4 280 aaKnown RBP17.91■□□□□ 0.46
NEK4-202ENST00000383721 IGHDP01880 384 aa17.91■□□□□ 0.46
NEK4-202ENST00000383721 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
NEK4-202ENST00000383721 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
NEK4-202ENST00000383721 IQSEC2Q5JU85 1478 aa17.91■□□□□ 0.46
NEK4-202ENST00000383721 CGNL1Q0VF96 1302 aa17.91■□□□□ 0.46
NEK4-202ENST00000383721 NEFMP07197 916 aa17.9■□□□□ 0.46
NEK4-202ENST00000383721 MTHFSP49914 203 aa17.9■□□□□ 0.46
NEK4-202ENST00000383721 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
NEK4-202ENST00000383721 DLC1Q96QB1 1528 aa17.9■□□□□ 0.46
NEK4-202ENST00000383721 PTCH1Q13635 1447 aa17.9■□□□□ 0.46
NEK4-202ENST00000383721 MINK1Q8N4C8 1332 aaPredicted RBP17.9■□□□□ 0.46
NEK4-202ENST00000383721 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.46
NEK4-202ENST00000383721 USP32Q8NFA0 1604 aa17.89■□□□□ 0.45
NEK4-202ENST00000383721 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
NEK4-202ENST00000383721 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
NEK4-202ENST00000383721 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
NEK4-202ENST00000383721 NINLQ9Y2I6 1382 aa17.89■□□□□ 0.45
NEK4-202ENST00000383721 FAM135BQ49AJ0 1406 aa17.88■□□□□ 0.45
NEK4-202ENST00000383721 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
NEK4-202ENST00000383721 COG6Q9Y2V7 657 aa17.88■□□□□ 0.45
NEK4-202ENST00000383721 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
NEK4-202ENST00000383721 EVC2Q86UK5 1308 aa17.87■□□□□ 0.45
NEK4-202ENST00000383721 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
NEK4-202ENST00000383721 CANXP27824 592 aaKnown RBP17.86■□□□□ 0.45
NEK4-202ENST00000383721 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
NEK4-202ENST00000383721 SIRT1Q96EB6 747 aa17.86■□□□□ 0.45
NEK4-202ENST00000383721 ANKRD36BQ8N2N9 1353 aa17.86■□□□□ 0.45
NEK4-202ENST00000383721 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
NEK4-202ENST00000383721 WDR63Q8IWG1 891 aa17.86■□□□□ 0.45
NEK4-202ENST00000383721 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
NEK4-202ENST00000383721 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
NEK4-202ENST00000383721 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
NEK4-202ENST00000383721 FRAT1Q92837 279 aaPredicted RBP17.85■□□□□ 0.45
NEK4-202ENST00000383721 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
NEK4-202ENST00000383721 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
NEK4-202ENST00000383721 LRRC7Q96NW7 1537 aa17.84■□□□□ 0.45
NEK4-202ENST00000383721 C14orf37Q86TY3 774 aa17.83■□□□□ 0.44
NEK4-202ENST00000383721 NSD2O96028 1365 aa17.83■□□□□ 0.44
NEK4-202ENST00000383721 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.44
NEK4-202ENST00000383721 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
NEK4-202ENST00000383721 RLBP1P12271 317 aa17.81■□□□□ 0.44
NEK4-202ENST00000383721 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
NEK4-202ENST00000383721 XIRP1Q702N8 1843 aaKnown RBP17.8■□□□□ 0.44
NEK4-202ENST00000383721 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
NEK4-202ENST00000383721 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
NEK4-202ENST00000383721 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
NEK4-202ENST00000383721 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
NEK4-202ENST00000383721 BCL2L13Q9BXK5 485 aa17.79■□□□□ 0.44
NEK4-202ENST00000383721 DAXXQ9UER7 740 aaPredicted RBP17.79■□□□□ 0.44
NEK4-202ENST00000383721 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
NEK4-202ENST00000383721 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
NEK4-202ENST00000383721 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
NEK4-202ENST00000383721 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
NEK4-202ENST00000383721 PCDHB15Q9Y5E8 787 aa17.78■□□□□ 0.44
NEK4-202ENST00000383721 WASLO00401 505 aaPredicted RBP17.77■□□□□ 0.44
NEK4-202ENST00000383721 USP19O94966 1318 aa17.77■□□□□ 0.43
NEK4-202ENST00000383721 AAMPQ13685 434 aa17.77■□□□□ 0.43
NEK4-202ENST00000383721 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.43
NEK4-202ENST00000383721 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
NEK4-202ENST00000383721 NFKBIBQ15653 356 aa17.76■□□□□ 0.43
NEK4-202ENST00000383721 ADGRB2O60241 1585 aa17.75■□□□□ 0.43
NEK4-202ENST00000383721 PMFBP1Q8TBY8 1022 aa17.75■□□□□ 0.43
NEK4-202ENST00000383721 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
NEK4-202ENST00000383721 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
NEK4-202ENST00000383721 SEC24BO95487 1268 aa17.74■□□□□ 0.43
NEK4-202ENST00000383721 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
NEK4-202ENST00000383721 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
NEK4-202ENST00000383721 MSH6P52701 1360 aa17.72■□□□□ 0.43
NEK4-202ENST00000383721 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
NEK4-202ENST00000383721 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
NEK4-202ENST00000383721 TSR2Q969E8 191 aaKnown RBP17.71■□□□□ 0.43
NEK4-202ENST00000383721 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
NEK4-202ENST00000383721 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
NEK4-202ENST00000383721 FYB1O15117 783 aa17.71■□□□□ 0.43
NEK4-202ENST00000383721 ATAD2Q6PL18 1390 aa17.7■□□□□ 0.42
NEK4-202ENST00000383721 CD163L1Q9NR16 1453 aa17.7■□□□□ 0.42
NEK4-202ENST00000383721 ATF3P18847 181 aa17.7■□□□□ 0.42
NEK4-202ENST00000383721 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
NEK4-202ENST00000383721 NUDT16Q96DE0 195 aaKnown RBP17.7■□□□□ 0.42
NEK4-202ENST00000383721 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
NEK4-202ENST00000383721 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
NEK4-202ENST00000383721 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
NEK4-202ENST00000383721 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
NEK4-202ENST00000383721 ATP7BP35670 1465 aa17.69■□□□□ 0.42
NEK4-202ENST00000383721 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
NEK4-202ENST00000383721 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms