RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 VIMP08670 466 aaKnown RBP11.68□□□□□ -0.54
VLDLR-203ENST00000382100 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
VLDLR-203ENST00000382100 PAIP2Q9BPZ3 127 aaKnown RBP11.68□□□□□ -0.54
VLDLR-203ENST00000382100 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
VLDLR-203ENST00000382100 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
VLDLR-203ENST00000382100 CCDC110Q8TBZ0 833 aa11.68□□□□□ -0.54
VLDLR-203ENST00000382100 SRRTQ9BXP5 876 aaKnown RBP11.68□□□□□ -0.54
VLDLR-203ENST00000382100 WDR33Q9C0J8 1336 aaKnown RBP11.68□□□□□ -0.54
VLDLR-203ENST00000382100 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
VLDLR-203ENST00000382100 PODXL2Q9NZ53 605 aa11.68□□□□□ -0.54
VLDLR-203ENST00000382100 ARID4AP29374 1257 aaPredicted RBP11.67□□□□□ -0.54
VLDLR-203ENST00000382100 GSDMDP57764 484 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 PHAXQ9H814 394 aaKnown RBP11.67□□□□□ -0.54
VLDLR-203ENST00000382100 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
VLDLR-203ENST00000382100 CASTP20810 708 aaKnown RBP11.67□□□□□ -0.54
VLDLR-203ENST00000382100 PRIMPOLQ96LW4 560 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 FAM184BQ9ULE4 1060 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 ANKS4BQ8N8V4 417 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 CGNQ9P2M7 1197 aaKnown RBP11.67□□□□□ -0.54
VLDLR-203ENST00000382100 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
VLDLR-203ENST00000382100 CTAGE5O15320 804 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
VLDLR-203ENST00000382100 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
VLDLR-203ENST00000382100 CCDC6Q16204 474 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 GOLIM4O00461 696 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 PPFIBP1Q86W92 1011 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 ZBTB17Q13105 803 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 HS1BP3Q53T59 392 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 KRT32Q14532 448 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 WASF1Q92558 559 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 DAPK1P53355 1430 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 CNPY4Q8N129 248 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 ZNF397Q8NF99 534 aaPredicted RBP11.66□□□□□ -0.54
VLDLR-203ENST00000382100 KIF18AQ8NI77 898 aa11.66□□□□□ -0.54
VLDLR-203ENST00000382100 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
VLDLR-203ENST00000382100 ENOX2Q16206 610 aaKnown RBP11.66□□□□□ -0.54
VLDLR-203ENST00000382100 USO1O60763 962 aaKnown RBP11.65□□□□□ -0.54
VLDLR-203ENST00000382100 CCDC148Q8NFR7 591 aa11.65□□□□□ -0.54
VLDLR-203ENST00000382100 TRIM5Q9C035 493 aa11.65□□□□□ -0.54
VLDLR-203ENST00000382100 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
VLDLR-203ENST00000382100 DYNC1I1O14576 645 aa11.65□□□□□ -0.55
VLDLR-203ENST00000382100 UBXN4Q92575 508 aa11.65□□□□□ -0.55
VLDLR-203ENST00000382100 ZSCAN30Q86W11 494 aa11.65□□□□□ -0.55
VLDLR-203ENST00000382100 CROCCP2Q86T23 111 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
VLDLR-203ENST00000382100 NSRP1Q9H0G5 558 aaKnown RBP11.64□□□□□ -0.55
VLDLR-203ENST00000382100 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
VLDLR-203ENST00000382100 PDE4AP27815 886 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 NAP1L1P55209 391 aaKnown RBP11.64□□□□□ -0.55
VLDLR-203ENST00000382100 PAXIP1Q6ZW49 1069 aaPredicted RBP11.64□□□□□ -0.55
VLDLR-203ENST00000382100 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 CCDC181Q5TID7 509 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 MIPOL1Q8TD10 442 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 CHIC2Q9UKJ5 165 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 PRPHP41219 470 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 GRIPAP1Q4V328 841 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 TMCO3Q6UWJ1 677 aa11.64□□□□□ -0.55
VLDLR-203ENST00000382100 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
VLDLR-203ENST00000382100 TRIM22Q8IYM9 498 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 LRRC45Q96CN5 670 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 TSPY26PQ9H489 355 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 CDC45O75419 566 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 CEP112Q8N8E3 955 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 NDC80O14777 642 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 CTDP1Q9Y5B0 961 aaPredicted RBP11.63□□□□□ -0.55
VLDLR-203ENST00000382100 CCDC172P0C7W6 258 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
VLDLR-203ENST00000382100 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
VLDLR-203ENST00000382100 PAXBP1Q9Y5B6 917 aa11.62□□□□□ -0.55
VLDLR-203ENST00000382100 ANKRD30BQ9BXX2 1392 aa11.62□□□□□ -0.55
VLDLR-203ENST00000382100 A0A1B0GUA9 196 aa11.62□□□□□ -0.55
VLDLR-203ENST00000382100 KRT85P78386 507 aa11.62□□□□□ -0.55
VLDLR-203ENST00000382100 CPSF2Q9P2I0 782 aaKnown RBP11.62□□□□□ -0.55
VLDLR-203ENST00000382100 SUDS3Q9H7L9 328 aaPredicted RBP11.61□□□□□ -0.55
VLDLR-203ENST00000382100 CCDC38Q502W7 563 aa11.61□□□□□ -0.55
VLDLR-203ENST00000382100 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
VLDLR-203ENST00000382100 CLUL1Q15846 466 aa11.61□□□□□ -0.55
VLDLR-203ENST00000382100 GNAI3P08754 354 aa11.61□□□□□ -0.55
VLDLR-203ENST00000382100 SFPQP23246 707 aaKnown RBP eCLIP11.61□□□□□ -0.55
VLDLR-203ENST00000382100 SARNPP82979 210 aaKnown RBP11.61□□□□□ -0.55
VLDLR-203ENST00000382100 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
VLDLR-203ENST00000382100 IFI16Q16666 785 aaKnown RBP11.61□□□□□ -0.55
VLDLR-203ENST00000382100 DAAM2Q86T65 1068 aa11.61□□□□□ -0.55
VLDLR-203ENST00000382100 SCAND2PQ9GZW5 306 aaPredicted RBP11.61□□□□□ -0.55
VLDLR-203ENST00000382100 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 CEP131Q9UPN4 1083 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 PPFIA3O75145 1194 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 MEX3CQ5U5Q3 659 aaKnown RBP11.6□□□□□ -0.55
VLDLR-203ENST00000382100 MCTP1Q6DN14 999 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 ZSCAN31Q96LW9 406 aaPredicted RBP11.6□□□□□ -0.55
VLDLR-203ENST00000382100 PDE3AQ14432 1141 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 KIAA1524Q8TCG1 905 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 KIF5CO60282 957 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 CEP63Q96MT8 703 aa11.6□□□□□ -0.55
VLDLR-203ENST00000382100 G3V3G9 751 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms