RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GOLGA6L1Q8N7Z2 621 aa18.09■□□□□ 0.49
SNPH-202ENST00000381873 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
SNPH-202ENST00000381873 PRM3Q9NNZ6 103 aa18.09■□□□□ 0.49
SNPH-202ENST00000381873 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
SNPH-202ENST00000381873 WDR7Q9Y4E6 1490 aa18.08■□□□□ 0.49
SNPH-202ENST00000381873 RALYLQ86SE5 291 aaKnown RBP18.08■□□□□ 0.48
SNPH-202ENST00000381873 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
SNPH-202ENST00000381873 GNAI3P08754 354 aa18.08■□□□□ 0.48
SNPH-202ENST00000381873 PRAM1Q96QH2 718 aa18.07■□□□□ 0.48
SNPH-202ENST00000381873 ARID3AQ99856 593 aa18.07■□□□□ 0.48
SNPH-202ENST00000381873 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
SNPH-202ENST00000381873 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 PANK1Q8TE04 598 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 CCDC30Q5VVM6 783 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 VPS37CA5D8V6 355 aaPredicted RBP18.06■□□□□ 0.48
SNPH-202ENST00000381873 CHMP5Q9NZZ3 219 aa18.06■□□□□ 0.48
SNPH-202ENST00000381873 DUOX2Q9NRD8 1548 aa18.05■□□□□ 0.48
SNPH-202ENST00000381873 SAFBQ15424 915 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNPH-202ENST00000381873 TCOF1Q13428 1488 aaKnown RBP18.05■□□□□ 0.48
SNPH-202ENST00000381873 ANKRD20A12PQ8NF67 263 aa18.05■□□□□ 0.48
SNPH-202ENST00000381873 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
SNPH-202ENST00000381873 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
SNPH-202ENST00000381873 IPO7O95373 1038 aaKnown RBP18.04■□□□□ 0.48
SNPH-202ENST00000381873 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
SNPH-202ENST00000381873 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
SNPH-202ENST00000381873 SURF6O75683 361 aaKnown RBP18.02■□□□□ 0.48
SNPH-202ENST00000381873 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.48
SNPH-202ENST00000381873 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
SNPH-202ENST00000381873 NUCB2P80303 420 aa18.02■□□□□ 0.48
SNPH-202ENST00000381873 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.48
SNPH-202ENST00000381873 ZNF518AQ6AHZ1 1483 aa18.02■□□□□ 0.48
SNPH-202ENST00000381873 PPP2R1AP30153 589 aa18.02■□□□□ 0.47
SNPH-202ENST00000381873 SHANK2Q9UPX8 1470 aa18.01■□□□□ 0.47
SNPH-202ENST00000381873 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
SNPH-202ENST00000381873 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
SNPH-202ENST00000381873 CCDC27Q2M243 656 aa18.01■□□□□ 0.47
SNPH-202ENST00000381873 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
SNPH-202ENST00000381873 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
SNPH-202ENST00000381873 MAPKBP1O60336 1514 aa18■□□□□ 0.47
SNPH-202ENST00000381873 WWC1Q8IX03 1113 aa18■□□□□ 0.47
SNPH-202ENST00000381873 PCMTD1Q96MG8 357 aaPredicted RBP18■□□□□ 0.47
SNPH-202ENST00000381873 RPRD2Q5VT52 1461 aaKnown RBP18■□□□□ 0.47
SNPH-202ENST00000381873 CDC45O75419 566 aa17.99■□□□□ 0.47
SNPH-202ENST00000381873 CCDC43Q96MW1 224 aaKnown RBP17.99■□□□□ 0.47
SNPH-202ENST00000381873 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
SNPH-202ENST00000381873 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
SNPH-202ENST00000381873 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
SNPH-202ENST00000381873 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
SNPH-202ENST00000381873 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
SNPH-202ENST00000381873 FSD1Q9BTV5 496 aa17.98■□□□□ 0.47
SNPH-202ENST00000381873 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
SNPH-202ENST00000381873 GSE1Q14687 1217 aa17.98■□□□□ 0.47
SNPH-202ENST00000381873 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
SNPH-202ENST00000381873 CCDC73Q6ZRK6 1079 aa17.98■□□□□ 0.47
SNPH-202ENST00000381873 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
SNPH-202ENST00000381873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.97■□□□□ 0.47
SNPH-202ENST00000381873 SULT6B1Q6IMI4 303 aa17.97■□□□□ 0.47
SNPH-202ENST00000381873 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
SNPH-202ENST00000381873 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
SNPH-202ENST00000381873 KDM5BQ9UGL1 1544 aa17.97■□□□□ 0.47
SNPH-202ENST00000381873 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
SNPH-202ENST00000381873 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
SNPH-202ENST00000381873 ABCC10Q5T3U5 1492 aa17.97■□□□□ 0.47
SNPH-202ENST00000381873 FYB1O15117 783 aa17.96■□□□□ 0.47
SNPH-202ENST00000381873 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
SNPH-202ENST00000381873 PSMA5P28066 241 aa17.96■□□□□ 0.46
SNPH-202ENST00000381873 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.46
SNPH-202ENST00000381873 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
SNPH-202ENST00000381873 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
SNPH-202ENST00000381873 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
SNPH-202ENST00000381873 CDCA7LQ96GN5 454 aa17.95■□□□□ 0.46
SNPH-202ENST00000381873 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
SNPH-202ENST00000381873 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
SNPH-202ENST00000381873 CCDC70Q6NSX1 233 aa17.94■□□□□ 0.46
SNPH-202ENST00000381873 XBP1P17861 261 aa17.94■□□□□ 0.46
SNPH-202ENST00000381873 A2MP01023 1474 aa17.94■□□□□ 0.46
SNPH-202ENST00000381873 SART3Q15020 963 aaKnown RBP17.93■□□□□ 0.46
SNPH-202ENST00000381873 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
SNPH-202ENST00000381873 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
SNPH-202ENST00000381873 SASS6Q6UVJ0 657 aa17.93■□□□□ 0.46
SNPH-202ENST00000381873 TOM1L2Q6ZVM7 507 aa17.93■□□□□ 0.46
SNPH-202ENST00000381873 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
SNPH-202ENST00000381873 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
SNPH-202ENST00000381873 BRMS1Q9HCU9 246 aa17.92■□□□□ 0.46
SNPH-202ENST00000381873 GNAI2P04899 355 aa17.92■□□□□ 0.46
SNPH-202ENST00000381873 FOSBP53539 338 aa17.92■□□□□ 0.46
SNPH-202ENST00000381873 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
SNPH-202ENST00000381873 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
SNPH-202ENST00000381873 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
SNPH-202ENST00000381873 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
SNPH-202ENST00000381873 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
SNPH-202ENST00000381873 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
SNPH-202ENST00000381873 SYCP2Q9BX26 1530 aa17.91■□□□□ 0.46
SNPH-202ENST00000381873 CABP4P57796 275 aa17.9■□□□□ 0.46
SNPH-202ENST00000381873 DDX54Q8TDD1 881 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms