RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
SNPH-201ENST00000381867 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
SNPH-201ENST00000381867 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
SNPH-201ENST00000381867 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
SNPH-201ENST00000381867 AKAP17AQ02040 695 aaKnown RBP16.95■□□□□ 0.3
SNPH-201ENST00000381867 CPLX2Q6PUV4 134 aaKnown RBP16.95■□□□□ 0.3
SNPH-201ENST00000381867 NOM1Q5C9Z4 860 aaKnown RBP16.94■□□□□ 0.3
SNPH-201ENST00000381867 A2MP01023 1474 aa16.94■□□□□ 0.3
SNPH-201ENST00000381867 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
SNPH-201ENST00000381867 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
SNPH-201ENST00000381867 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
SNPH-201ENST00000381867 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
SNPH-201ENST00000381867 ANO2Q9NQ90 1003 aa16.93■□□□□ 0.3
SNPH-201ENST00000381867 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
SNPH-201ENST00000381867 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
SNPH-201ENST00000381867 SASS6Q6UVJ0 657 aa16.93■□□□□ 0.3
SNPH-201ENST00000381867 ACBD3Q9H3P7 528 aa16.93■□□□□ 0.3
SNPH-201ENST00000381867 INTS3Q68E01 1043 aaKnown RBP16.92■□□□□ 0.3
SNPH-201ENST00000381867 MNS1Q8NEH6 495 aa16.92■□□□□ 0.3
SNPH-201ENST00000381867 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
SNPH-201ENST00000381867 PATL2C9JE40 543 aaKnown RBP16.92■□□□□ 0.3
SNPH-201ENST00000381867 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
SNPH-201ENST00000381867 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
SNPH-201ENST00000381867 TRIM29Q14134 588 aa16.91■□□□□ 0.3
SNPH-201ENST00000381867 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
SNPH-201ENST00000381867 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
SNPH-201ENST00000381867 PRM3Q9NNZ6 103 aa16.9■□□□□ 0.3
SNPH-201ENST00000381867 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
SNPH-201ENST00000381867 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
SNPH-201ENST00000381867 DISP1Q96F81 1524 aa16.9■□□□□ 0.3
SNPH-201ENST00000381867 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
SNPH-201ENST00000381867 MTHFSP49914 203 aa16.89■□□□□ 0.29
SNPH-201ENST00000381867 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
SNPH-201ENST00000381867 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
SNPH-201ENST00000381867 TARBP1Q13395 1621 aaKnown RBP16.89■□□□□ 0.29
SNPH-201ENST00000381867 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
SNPH-201ENST00000381867 EIF2S2P20042 333 aaKnown RBP16.89■□□□□ 0.29
SNPH-201ENST00000381867 RNF20Q5VTR2 975 aa16.89■□□□□ 0.29
SNPH-201ENST00000381867 TNRQ92752 1358 aa16.88■□□□□ 0.29
SNPH-201ENST00000381867 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
SNPH-201ENST00000381867 AK7Q96M32 723 aa16.88■□□□□ 0.29
SNPH-201ENST00000381867 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
SNPH-201ENST00000381867 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
SNPH-201ENST00000381867 HSP90B2PQ58FF3 399 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 RUFY1Q96T51 708 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 NINLQ9Y2I6 1382 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 CALRP27797 417 aaKnown RBP16.87■□□□□ 0.29
SNPH-201ENST00000381867 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 CPLX1O14810 134 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 CCDC73Q6ZRK6 1079 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 SLC26A8Q96RN1 970 aa16.87■□□□□ 0.29
SNPH-201ENST00000381867 TRAK2O60296 914 aa16.86■□□□□ 0.29
SNPH-201ENST00000381867 CDR1P51861 262 aa16.86■□□□□ 0.29
SNPH-201ENST00000381867 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
SNPH-201ENST00000381867 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
SNPH-201ENST00000381867 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
SNPH-201ENST00000381867 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
SNPH-201ENST00000381867 KLHL34Q8N239 644 aa16.86■□□□□ 0.29
SNPH-201ENST00000381867 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
SNPH-201ENST00000381867 TRIM34Q9BYJ4 488 aa16.85■□□□□ 0.29
SNPH-201ENST00000381867 CCDC66A2RUB6 948 aa16.85■□□□□ 0.29
SNPH-201ENST00000381867 IFIT2P09913 472 aaKnown RBP16.85■□□□□ 0.29
SNPH-201ENST00000381867 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
SNPH-201ENST00000381867 CWC15Q9P013 229 aaKnown RBP16.85■□□□□ 0.29
SNPH-201ENST00000381867 BRPF3Q9ULD4 1205 aa16.85■□□□□ 0.29
SNPH-201ENST00000381867 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
SNPH-201ENST00000381867 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
SNPH-201ENST00000381867 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
SNPH-201ENST00000381867 KCNH5Q8NCM2 988 aa16.84■□□□□ 0.29
SNPH-201ENST00000381867 RAD21O60216 631 aa16.84■□□□□ 0.29
SNPH-201ENST00000381867 IDI1Q13907 227 aa16.84■□□□□ 0.29
SNPH-201ENST00000381867 CDC45O75419 566 aa16.83■□□□□ 0.29
SNPH-201ENST00000381867 LNPKQ9C0E8 428 aa16.83■□□□□ 0.29
SNPH-201ENST00000381867 TATP17735 454 aaPredicted RBP16.83■□□□□ 0.28
SNPH-201ENST00000381867 AMOTL1Q8IY63 956 aa16.83■□□□□ 0.28
SNPH-201ENST00000381867 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.28
SNPH-201ENST00000381867 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.28
SNPH-201ENST00000381867 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
SNPH-201ENST00000381867 LETM1O95202 739 aaPredicted RBP16.82■□□□□ 0.28
SNPH-201ENST00000381867 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
SNPH-201ENST00000381867 MBD3O95983 291 aa16.82■□□□□ 0.28
SNPH-201ENST00000381867 FBXW7Q969H0 707 aa16.82■□□□□ 0.28
SNPH-201ENST00000381867 NAT10Q9H0A0 1025 aaKnown RBP16.82■□□□□ 0.28
SNPH-201ENST00000381867 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
SNPH-201ENST00000381867 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
SNPH-201ENST00000381867 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
SNPH-201ENST00000381867 NECTIN2Q92692 538 aa16.81■□□□□ 0.28
SNPH-201ENST00000381867 HMOX1P09601 288 aa16.81■□□□□ 0.28
SNPH-201ENST00000381867 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
SNPH-201ENST00000381867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.81■□□□□ 0.28
SNPH-201ENST00000381867 VPS37DQ86XT2 251 aa16.81■□□□□ 0.28
SNPH-201ENST00000381867 RNF214Q8ND24 703 aa16.81■□□□□ 0.28
SNPH-201ENST00000381867 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
SNPH-201ENST00000381867 NOS1P29475 1434 aa16.8■□□□□ 0.28
SNPH-201ENST00000381867 RRP12Q5JTH9 1297 aaKnown RBP16.8■□□□□ 0.28
SNPH-201ENST00000381867 NSD2O96028 1365 aa16.8■□□□□ 0.28
SNPH-201ENST00000381867 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
SNPH-201ENST00000381867 TRDNQ13061 729 aa16.79■□□□□ 0.28
SNPH-201ENST00000381867 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms