RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 CCDC57Q2TAC2 916 aa11.1□□□□□ -0.63
FREM1-201ENST00000380875 RAI14Q9P0K7 980 aa11.1□□□□□ -0.63
FREM1-201ENST00000380875 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
FREM1-201ENST00000380875 RDXP35241 583 aaKnown RBP11.09□□□□□ -0.63
FREM1-201ENST00000380875 IGHMBP2P38935 993 aaKnown RBP11.09□□□□□ -0.63
FREM1-201ENST00000380875 RAPGEF3O95398 923 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 NEBLO76041 1014 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 PDCL3Q9H2J4 239 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 DMRT2Q9Y5R5 561 aa11.09□□□□□ -0.63
FREM1-201ENST00000380875 INTS3Q68E01 1043 aaKnown RBP11.08□□□□□ -0.63
FREM1-201ENST00000380875 OLFM4Q6UX06 510 aa11.08□□□□□ -0.63
FREM1-201ENST00000380875 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.63
FREM1-201ENST00000380875 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.63
FREM1-201ENST00000380875 ZNF652Q9Y2D9 606 aa11.08□□□□□ -0.63
FREM1-201ENST00000380875 FYCO1Q9BQS8 1478 aa11.08□□□□□ -0.64
FREM1-201ENST00000380875 CCDC97Q96F63 343 aaPredicted RBP11.08□□□□□ -0.64
FREM1-201ENST00000380875 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
FREM1-201ENST00000380875 CA8P35219 290 aa11.08□□□□□ -0.64
FREM1-201ENST00000380875 RPGRQ92834 1020 aaKnown RBP11.08□□□□□ -0.64
FREM1-201ENST00000380875 CRBNQ96SW2 442 aa11.08□□□□□ -0.64
FREM1-201ENST00000380875 NACAP1Q9BZK3 213 aa11.08□□□□□ -0.64
FREM1-201ENST00000380875 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
FREM1-201ENST00000380875 SURF6O75683 361 aaKnown RBP11.08□□□□□ -0.64
FREM1-201ENST00000380875 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
FREM1-201ENST00000380875 STARD3NLO95772 234 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 CCDC73Q6ZRK6 1079 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
FREM1-201ENST00000380875 SMARCA4P51532 1647 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 TXLNAP40222 546 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 TNNT3P45378 269 aaPredicted RBP11.07□□□□□ -0.64
FREM1-201ENST00000380875 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
FREM1-201ENST00000380875 CCDC69A6NI79 296 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 PSMA5P28066 241 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
FREM1-201ENST00000380875 NUP133Q8WUM0 1156 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 UBAP1LF5GYI3 381 aa11.07□□□□□ -0.64
FREM1-201ENST00000380875 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
FREM1-201ENST00000380875 USP5P45974 858 aa11.06□□□□□ -0.64
FREM1-201ENST00000380875 SASS6Q6UVJ0 657 aa11.06□□□□□ -0.64
FREM1-201ENST00000380875 AK7Q96M32 723 aa11.06□□□□□ -0.64
FREM1-201ENST00000380875 RTEL1-TNFRSF6BF6WH68 1400 aa11.06□□□□□ -0.64
FREM1-201ENST00000380875 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
FREM1-201ENST00000380875 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
FREM1-201ENST00000380875 PDILTQ8N807 584 aa11.06□□□□□ -0.64
FREM1-201ENST00000380875 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
FREM1-201ENST00000380875 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
FREM1-201ENST00000380875 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 ERC1Q8IUD2 1116 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 SCAPERQ9BY12 1400 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
FREM1-201ENST00000380875 SULT6B1Q6IMI4 303 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
FREM1-201ENST00000380875 TRIM21P19474 475 aaKnown RBP11.05□□□□□ -0.64
FREM1-201ENST00000380875 CFAP70Q5T0N1 1121 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 PIBF1Q8WXW3 757 aa11.05□□□□□ -0.64
FREM1-201ENST00000380875 CCDC173Q0VFZ6 552 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 GRIN2BQ13224 1484 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 GNAI3P08754 354 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 TDO2P48775 406 aa11.04□□□□□ -0.64
FREM1-201ENST00000380875 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
FREM1-201ENST00000380875 TTLL5Q6EMB2 1281 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 GPS2Q13227 327 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 ZSCAN25Q6NSZ9 544 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 RUFY1Q96T51 708 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 CUX1P39880 1505 aa11.03□□□□□ -0.64
FREM1-201ENST00000380875 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.64
FREM1-201ENST00000380875 CAGE1Q8TC20 777 aa11.02□□□□□ -0.64
FREM1-201ENST00000380875 MAP4K4O95819 1239 aaPredicted RBP11.02□□□□□ -0.65
FREM1-201ENST00000380875 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.65
FREM1-201ENST00000380875 HIP1O00291 1037 aa11.02□□□□□ -0.65
FREM1-201ENST00000380875 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
FREM1-201ENST00000380875 PPP4R3AQ6IN85 833 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 SKIDA1Q1XH10 827 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 TANGO6Q9C0B7 1094 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 BRPF1P55201 1214 aaPredicted RBP11.01□□□□□ -0.65
FREM1-201ENST00000380875 TNIP1Q15025 636 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 VTI1AQ96AJ9 217 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 DESP17661 470 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
FREM1-201ENST00000380875 CAVIN4Q5BKX8 364 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 ABCF2Q9UG63 623 aa11.01□□□□□ -0.65
FREM1-201ENST00000380875 RRP1P56182 461 aaKnown RBP11□□□□□ -0.65
FREM1-201ENST00000380875 DRC1Q96MC2 740 aa11□□□□□ -0.65
FREM1-201ENST00000380875 SEPT11Q9NVA2 429 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms