RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CBX1P83916 185 aa9.43□□□□□ -0.9
CDKL5-201ENST00000379989 ARHGEF40Q8TER5 1519 aa9.42□□□□□ -0.9
CDKL5-201ENST00000379989 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
CDKL5-201ENST00000379989 PPP1R9BQ96SB3 815 aa9.42□□□□□ -0.9
CDKL5-201ENST00000379989 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-201ENST00000379989 PIAS4Q8N2W9 510 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-201ENST00000379989 PREX1Q8TCU6 1659 aa9.42□□□□□ -0.9
CDKL5-201ENST00000379989 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
CDKL5-201ENST00000379989 USP32Q8NFA0 1604 aa9.42□□□□□ -0.9
CDKL5-201ENST00000379989 NINLQ9Y2I6 1382 aa9.41□□□□□ -0.9
CDKL5-201ENST00000379989 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
CDKL5-201ENST00000379989 CCDC173Q0VFZ6 552 aa9.41□□□□□ -0.9
CDKL5-201ENST00000379989 CENPQQ7L2Z9 268 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-201ENST00000379989 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
CDKL5-201ENST00000379989 NGEFQ8N5V2 710 aa9.41□□□□□ -0.9
CDKL5-201ENST00000379989 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
CDKL5-201ENST00000379989 MROH2AA6NES4 1674 aa9.41□□□□□ -0.9
CDKL5-201ENST00000379989 CERS3Q8IU89 383 aa9.4□□□□□ -0.9
CDKL5-201ENST00000379989 NLRP1Q9C000 1473 aa9.4□□□□□ -0.9
CDKL5-201ENST00000379989 TESK2Q96S53 571 aa9.4□□□□□ -0.9
CDKL5-201ENST00000379989 KCNG1Q9UIX4 513 aa9.4□□□□□ -0.91
CDKL5-201ENST00000379989 ZNF500O60304 480 aaPredicted RBP9.39□□□□□ -0.91
CDKL5-201ENST00000379989 XPCQ01831 940 aaPredicted RBP9.39□□□□□ -0.91
CDKL5-201ENST00000379989 SLC20A2Q08357 652 aa9.39□□□□□ -0.91
CDKL5-201ENST00000379989 ATP2B3Q16720 1220 aa9.39□□□□□ -0.91
CDKL5-201ENST00000379989 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
CDKL5-201ENST00000379989 SPATA31D1Q6ZQQ2 1576 aa9.39□□□□□ -0.91
CDKL5-201ENST00000379989 SEC24BO95487 1268 aa9.39□□□□□ -0.91
CDKL5-201ENST00000379989 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
CDKL5-201ENST00000379989 NEXMIFQ5QGS0 1516 aa9.38□□□□□ -0.91
CDKL5-201ENST00000379989 PDE3BQ13370 1112 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
CDKL5-201ENST00000379989 BCCIPQ9P287 314 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDKL5-201ENST00000379989 KDM2AQ9Y2K7 1162 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-201ENST00000379989 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 ADGRB1O14514 1584 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 TMEM131LA2VDJ0 1609 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 ASXL1Q8IXJ9 1541 aa9.37□□□□□ -0.91
CDKL5-201ENST00000379989 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 C14orf93Q9H972 538 aaKnown RBP9.36□□□□□ -0.91
CDKL5-201ENST00000379989 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 C20orf194Q5TEA3 1177 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 PANK3Q9H999 370 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 IGSF3O75054 1194 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 MMP14P50281 582 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 MYOM1P52179 1685 aa9.36□□□□□ -0.91
CDKL5-201ENST00000379989 NOL7Q9UMY1 257 aaKnown RBP9.36□□□□□ -0.91
CDKL5-201ENST00000379989 ERVK-7P63135 1459 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 NSD2O96028 1365 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 CNPY4Q8N129 248 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-201ENST00000379989 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-201ENST00000379989 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
CDKL5-201ENST00000379989 NASPP49321 788 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-201ENST00000379989 RGL3Q3MIN7 710 aa9.35□□□□□ -0.91
CDKL5-201ENST00000379989 CLTCQ00610 1675 aaKnown RBP9.34□□□□□ -0.91
CDKL5-201ENST00000379989 KCNJ4P48050 445 aa9.34□□□□□ -0.91
CDKL5-201ENST00000379989 CHMP5Q9NZZ3 219 aa9.34□□□□□ -0.91
CDKL5-201ENST00000379989 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 QRICH2Q9H0J4 1663 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 SOX12O15370 315 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 PSEN1P49768 467 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 CDCA7LQ96GN5 454 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 HDAC5Q9UQL6 1122 aa9.33□□□□□ -0.92
CDKL5-201ENST00000379989 ARHGEF28Q8N1W1 1705 aaKnown RBP9.32□□□□□ -0.92
CDKL5-201ENST00000379989 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
CDKL5-201ENST00000379989 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
CDKL5-201ENST00000379989 TSC1Q92574 1164 aa9.32□□□□□ -0.92
CDKL5-201ENST00000379989 DISP3Q9P2K9 1392 aa9.32□□□□□ -0.92
CDKL5-201ENST00000379989 BLMP54132 1417 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-201ENST00000379989 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
CDKL5-201ENST00000379989 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
CDKL5-201ENST00000379989 MYRIPQ8NFW9 859 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 CHMP4CQ96CF2 233 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 KNDC1Q76NI1 1749 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 ZNF771Q7L3S4 317 aaPredicted RBP9.31□□□□□ -0.92
CDKL5-201ENST00000379989 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDKL5-201ENST00000379989 ZBTB9Q96C00 473 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
CDKL5-201ENST00000379989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDKL5-201ENST00000379989 MED14O60244 1454 aa9.3□□□□□ -0.92
CDKL5-201ENST00000379989 ZKSCAN5Q9Y2L8 839 aa9.3□□□□□ -0.92
CDKL5-201ENST00000379989 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
CDKL5-201ENST00000379989 KNSTRNQ9Y448 316 aa9.3□□□□□ -0.92
CDKL5-201ENST00000379989 CAPN2P17655 700 aa9.29□□□□□ -0.92
CDKL5-201ENST00000379989 WWC1Q8IX03 1113 aa9.29□□□□□ -0.92
CDKL5-201ENST00000379989 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
CDKL5-201ENST00000379989 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
CDKL5-201ENST00000379989 CLGNO14967 610 aa9.28□□□□□ -0.92
CDKL5-201ENST00000379989 GGT6Q6P531 493 aa9.28□□□□□ -0.92
CDKL5-201ENST00000379989 PDLIM2Q96JY6 352 aa9.28□□□□□ -0.92
CDKL5-201ENST00000379989 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms