RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 GOLGA6L22H0YM25 854 aa19.47■□□□□ 0.71
CSNK1A1-202ENST00000377843 MCTP1Q6DN14 999 aa19.47■□□□□ 0.71
CSNK1A1-202ENST00000377843 ZSCAN20P17040 1043 aaPredicted RBP19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 NCLP19338 710 aaKnown RBP19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 DMTNQ08495 405 aa19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 UNC13BO14795 1591 aa19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 SHPRHQ149N8 1683 aa19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 ITPRIPQ8IWB1 547 aa19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
CSNK1A1-202ENST00000377843 MTERF4Q7Z6M4 381 aaKnown RBP19.45■□□□□ 0.7
CSNK1A1-202ENST00000377843 LMBRD1Q9NUN5 540 aa19.45■□□□□ 0.7
CSNK1A1-202ENST00000377843 NUCB1Q02818 461 aa19.45■□□□□ 0.7
CSNK1A1-202ENST00000377843 RBM27Q9P2N5 1060 aaKnown RBP19.45■□□□□ 0.7
CSNK1A1-202ENST00000377843 CD109Q6YHK3 1445 aa19.45■□□□□ 0.7
CSNK1A1-202ENST00000377843 ADGRL1O94910 1474 aa19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 PKP1Q13835 747 aa19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 CCDC94Q9BW85 323 aaPredicted RBP19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 ATP10AO60312 1499 aa19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 KANK1Q14678 1352 aa19.44■□□□□ 0.7
CSNK1A1-202ENST00000377843 UTP14CQ5TAP6 766 aaKnown RBP19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 TSC1Q92574 1164 aa19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 SMC4Q9NTJ3 1288 aa19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 ABCA9Q8IUA7 1624 aa19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
CSNK1A1-202ENST00000377843 CSPP1Q1MSJ5 1256 aa19.41■□□□□ 0.7
CSNK1A1-202ENST00000377843 CEP152O94986 1710 aa19.41■□□□□ 0.7
CSNK1A1-202ENST00000377843 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
CSNK1A1-202ENST00000377843 DDX19BQ9UMR2 479 aa19.41■□□□□ 0.7
CSNK1A1-202ENST00000377843 GPT2Q8TD30 523 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 SSH1Q8WYL5 1049 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 ZBTB40Q9NUA8 1239 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 IQGAP3Q86VI3 1631 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 ZBTB7CA1YPR0 619 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 TBC1D9Q6ZT07 1266 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 CHD1LQ86WJ1 897 aa19.4■□□□□ 0.7
CSNK1A1-202ENST00000377843 KIF3BO15066 747 aa19.39■□□□□ 0.7
CSNK1A1-202ENST00000377843 CCDC27Q2M243 656 aa19.39■□□□□ 0.7
CSNK1A1-202ENST00000377843 BMP2KLQ5H9B9 411 aa19.39■□□□□ 0.7
CSNK1A1-202ENST00000377843 CHAMP1Q96JM3 812 aa19.39■□□□□ 0.7
CSNK1A1-202ENST00000377843 ERVK-7P63135 1459 aa19.39■□□□□ 0.7
CSNK1A1-202ENST00000377843 CYP2E1P05181 493 aaPredicted RBP19.39■□□□□ 0.69
CSNK1A1-202ENST00000377843 ZNF710Q8N1W2 664 aa19.39■□□□□ 0.69
CSNK1A1-202ENST00000377843 KDM5AP29375 1690 aaKnown RBP19.39■□□□□ 0.69
CSNK1A1-202ENST00000377843 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
CSNK1A1-202ENST00000377843 FAM69CQ0P6D2 419 aa19.38■□□□□ 0.69
CSNK1A1-202ENST00000377843 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
CSNK1A1-202ENST00000377843 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
CSNK1A1-202ENST00000377843 AK9Q5TCS8 1911 aa19.38■□□□□ 0.69
CSNK1A1-202ENST00000377843 MCM5P33992 734 aa19.38■□□□□ 0.69
CSNK1A1-202ENST00000377843 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
CSNK1A1-202ENST00000377843 PRPF40AO75400 957 aaKnown RBP19.36■□□□□ 0.69
CSNK1A1-202ENST00000377843 MORC1Q86VD1 984 aa19.36■□□□□ 0.69
CSNK1A1-202ENST00000377843 TMEM63CQ9P1W3 806 aa19.36■□□□□ 0.69
CSNK1A1-202ENST00000377843 CCDC39Q9UFE4 941 aa19.35■□□□□ 0.69
CSNK1A1-202ENST00000377843 KIF16BQ96L93 1317 aa19.35■□□□□ 0.69
CSNK1A1-202ENST00000377843 MAST1Q9Y2H9 1570 aa19.34■□□□□ 0.69
CSNK1A1-202ENST00000377843 SYCE3A1L190 88 aa19.34■□□□□ 0.69
CSNK1A1-202ENST00000377843 CBX1P83916 185 aa19.34■□□□□ 0.69
CSNK1A1-202ENST00000377843 MYRIPQ8NFW9 859 aa19.34■□□□□ 0.69
CSNK1A1-202ENST00000377843 ZFYVE16Q7Z3T8 1539 aa19.33■□□□□ 0.69
CSNK1A1-202ENST00000377843 CFAP74Q9C0B2 1584 aa19.33■□□□□ 0.69
CSNK1A1-202ENST00000377843 RNF214Q8ND24 703 aa19.33■□□□□ 0.69
CSNK1A1-202ENST00000377843 MTHFSP49914 203 aa19.33■□□□□ 0.68
CSNK1A1-202ENST00000377843 LRSAM1Q6UWE0 723 aa19.33■□□□□ 0.68
CSNK1A1-202ENST00000377843 DUOX2Q9NRD8 1548 aa19.32■□□□□ 0.68
CSNK1A1-202ENST00000377843 FAM177BA6PVY3 158 aa19.32■□□□□ 0.68
CSNK1A1-202ENST00000377843 ATP2B3Q16720 1220 aa19.32■□□□□ 0.68
CSNK1A1-202ENST00000377843 ZDHHC9Q9Y397 364 aa19.32■□□□□ 0.68
CSNK1A1-202ENST00000377843 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
CSNK1A1-202ENST00000377843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.32■□□□□ 0.688e-7■■■□□ 18.1
CSNK1A1-202ENST00000377843 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
CSNK1A1-202ENST00000377843 NUCB2P80303 420 aa19.31■□□□□ 0.68
CSNK1A1-202ENST00000377843 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
CSNK1A1-202ENST00000377843 NOS1P29475 1434 aa19.3■□□□□ 0.68
CSNK1A1-202ENST00000377843 MPNDQ8N594 471 aa19.3■□□□□ 0.68
CSNK1A1-202ENST00000377843 ARAP3Q8WWN8 1544 aa19.3■□□□□ 0.68
CSNK1A1-202ENST00000377843 ZNF518AQ6AHZ1 1483 aa19.3■□□□□ 0.68
CSNK1A1-202ENST00000377843 GGT6Q6P531 493 aa19.3■□□□□ 0.68
CSNK1A1-202ENST00000377843 ATP7AQ04656 1500 aa19.3■□□□□ 0.68
CSNK1A1-202ENST00000377843 PPP4R3BQ5MIZ7 849 aa19.29■□□□□ 0.68
CSNK1A1-202ENST00000377843 CFAP70Q5T0N1 1121 aa19.29■□□□□ 0.68
CSNK1A1-202ENST00000377843 CT47B1P0C2W7 299 aaPredicted RBP19.29■□□□□ 0.68
CSNK1A1-202ENST00000377843 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
CSNK1A1-202ENST00000377843 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
CSNK1A1-202ENST00000377843 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
CSNK1A1-202ENST00000377843 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
CSNK1A1-202ENST00000377843 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
CSNK1A1-202ENST00000377843 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.682e-6■■■■□ 21.7
CSNK1A1-202ENST00000377843 ZNF830Q96NB3 372 aaPredicted RBP19.27■□□□□ 0.67
CSNK1A1-202ENST00000377843 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
CSNK1A1-202ENST00000377843 C17orf53Q8N3J3 647 aaPredicted RBP19.26■□□□□ 0.67
CSNK1A1-202ENST00000377843 GSPT1P15170 499 aaKnown RBP19.25■□□□□ 0.67
CSNK1A1-202ENST00000377843 BBXQ8WY36 941 aaPredicted RBP19.25■□□□□ 0.67
CSNK1A1-202ENST00000377843 GTPBP4Q9BZE4 634 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms