RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 PARD3Q8TEW0 1356 aa20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 DDX17Q92841 729 aaKnown RBP20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
CHRDL2-202ENST00000376324 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
CHRDL2-202ENST00000376324 NSD2O96028 1365 aa20.05■□□□□ 0.8
CHRDL2-202ENST00000376324 SSH2Q76I76 1423 aa20.04■□□□□ 0.8
CHRDL2-202ENST00000376324 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
CHRDL2-202ENST00000376324 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
CHRDL2-202ENST00000376324 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
CHRDL2-202ENST00000376324 NUTM2GQ5VZR2 741 aa20.02■□□□□ 0.8
CHRDL2-202ENST00000376324 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
CHRDL2-202ENST00000376324 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
CHRDL2-202ENST00000376324 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
CHRDL2-202ENST00000376324 PPP2R1AP30153 589 aa20■□□□□ 0.79
CHRDL2-202ENST00000376324 LMOD2Q6P5Q4 547 aa20■□□□□ 0.79
CHRDL2-202ENST00000376324 COG3Q96JB2 828 aa20■□□□□ 0.79
CHRDL2-202ENST00000376324 ABTB2Q8N961 1025 aa20■□□□□ 0.79
CHRDL2-202ENST00000376324 NPHP3Q7Z494 1330 aa20■□□□□ 0.79
CHRDL2-202ENST00000376324 PLEKHG5O94827 1062 aa19.98■□□□□ 0.79
CHRDL2-202ENST00000376324 NLRP6P59044 892 aa19.98■□□□□ 0.79
CHRDL2-202ENST00000376324 MRS2Q9HD23 443 aa19.98■□□□□ 0.79
CHRDL2-202ENST00000376324 PIK3C2AO00443 1686 aa19.98■□□□□ 0.79
CHRDL2-202ENST00000376324 BRD4O60885 1362 aaPredicted RBP19.98■□□□□ 0.79
CHRDL2-202ENST00000376324 CERKQ8TCT0 537 aa19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 SOX12O15370 315 aa19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 TOM1O60784 492 aa19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 PIP4K2BP78356 416 aa19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
CHRDL2-202ENST00000376324 TRPM3Q9HCF6 1732 aaPredicted RBP19.96■□□□□ 0.79
CHRDL2-202ENST00000376324 FBLN1P23142 703 aa19.96■□□□□ 0.79
CHRDL2-202ENST00000376324 ROBO1Q9Y6N7 1651 aa19.96■□□□□ 0.79
CHRDL2-202ENST00000376324 OVOS2A0A0J9YW53 1432 aa19.94■□□□□ 0.78
CHRDL2-202ENST00000376324 OVOS2Q6IE36 1432 aa19.94■□□□□ 0.78
CHRDL2-202ENST00000376324 PXDNQ92626 1479 aa19.94■□□□□ 0.78
CHRDL2-202ENST00000376324 USP31Q70CQ4 1352 aa19.93■□□□□ 0.78
CHRDL2-202ENST00000376324 NHSL1Q5SYE7 1610 aa19.91■□□□□ 0.78
CHRDL2-202ENST00000376324 SBNO1A3KN83 1393 aa19.91■□□□□ 0.78
CHRDL2-202ENST00000376324 IQSEC2Q5JU85 1478 aa19.91■□□□□ 0.78
CHRDL2-202ENST00000376324 MTHFSP49914 203 aa19.91■□□□□ 0.78
CHRDL2-202ENST00000376324 MARF1Q9Y4F3 1742 aaKnown RBP19.9■□□□□ 0.78
CHRDL2-202ENST00000376324 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
CHRDL2-202ENST00000376324 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
CHRDL2-202ENST00000376324 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.78
CHRDL2-202ENST00000376324 ALS2Q96Q42 1657 aa19.89■□□□□ 0.77
CHRDL2-202ENST00000376324 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
CHRDL2-202ENST00000376324 TNS3Q68CZ2 1445 aa19.89■□□□□ 0.77
CHRDL2-202ENST00000376324 SPATA31A3Q5VYP0 1347 aa19.89■□□□□ 0.77
CHRDL2-202ENST00000376324 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
CHRDL2-202ENST00000376324 POLKQ9UBT6 870 aa19.87■□□□□ 0.77
CHRDL2-202ENST00000376324 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
CHRDL2-202ENST00000376324 USP54Q70EL1 1684 aa19.86■□□□□ 0.77
CHRDL2-202ENST00000376324 AATKQ6ZMQ8 1374 aa19.86■□□□□ 0.77
CHRDL2-202ENST00000376324 ZBTB7CA1YPR0 619 aa19.84■□□□□ 0.77
CHRDL2-202ENST00000376324 CFAP53Q96M91 514 aa19.84■□□□□ 0.77
CHRDL2-202ENST00000376324 ARHGEF10O15013 1369 aa19.84■□□□□ 0.77
CHRDL2-202ENST00000376324 CABLES1Q8TDN4 633 aa19.84■□□□□ 0.77
CHRDL2-202ENST00000376324 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
CHRDL2-202ENST00000376324 AHDC1Q5TGY3 1603 aaPredicted RBP19.83■□□□□ 0.77
CHRDL2-202ENST00000376324 PHLPP1O60346 1717 aa19.83■□□□□ 0.76
CHRDL2-202ENST00000376324 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
CHRDL2-202ENST00000376324 GCP02774 474 aa19.81■□□□□ 0.76
CHRDL2-202ENST00000376324 KCNH5Q8NCM2 988 aa19.81■□□□□ 0.76
CHRDL2-202ENST00000376324 USP19O94966 1318 aa19.81■□□□□ 0.76
CHRDL2-202ENST00000376324 MAP3K19Q56UN5 1328 aa19.81■□□□□ 0.76
CHRDL2-202ENST00000376324 MED1Q15648 1581 aaPredicted RBP19.81■□□□□ 0.76
CHRDL2-202ENST00000376324 SLIT3O75094 1523 aa19.8■□□□□ 0.76
CHRDL2-202ENST00000376324 AMPHP49418 695 aa19.8■□□□□ 0.76
CHRDL2-202ENST00000376324 LRRC59Q96AG4 307 aaKnown RBP19.8■□□□□ 0.76
CHRDL2-202ENST00000376324 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHRDL2-202ENST00000376324 NFAT5O94916 1531 aa19.79■□□□□ 0.76
CHRDL2-202ENST00000376324 ZC3H6P61129 1189 aaKnown RBP19.78■□□□□ 0.76
CHRDL2-202ENST00000376324 PEAK1Q9H792 1746 aa19.78■□□□□ 0.76
CHRDL2-202ENST00000376324 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
CHRDL2-202ENST00000376324 LTN1O94822 1766 aa19.78■□□□□ 0.76
CHRDL2-202ENST00000376324 HAP1P54257 671 aaPredicted RBP19.78■□□□□ 0.76
CHRDL2-202ENST00000376324 PHRF1Q9P1Y6 1649 aaKnown RBP19.77■□□□□ 0.76
CHRDL2-202ENST00000376324 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.75
CHRDL2-202ENST00000376324 COL16A1Q07092 1604 aaPredicted RBP19.76■□□□□ 0.75
CHRDL2-202ENST00000376324 DIAPH1O60610 1272 aaKnown RBP19.75■□□□□ 0.75
CHRDL2-202ENST00000376324 HSP90AB2PQ58FF8 381 aa19.75■□□□□ 0.75
CHRDL2-202ENST00000376324 COL3A1P02461 1466 aaPredicted RBP19.75■□□□□ 0.75
CHRDL2-202ENST00000376324 PNPLA6Q8IY17 1366 aa19.75■□□□□ 0.75
CHRDL2-202ENST00000376324 CRYBG1Q9Y4K1 1723 aa19.75■□□□□ 0.75
CHRDL2-202ENST00000376324 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
CHRDL2-202ENST00000376324 SHPRHQ149N8 1683 aa19.74■□□□□ 0.75
CHRDL2-202ENST00000376324 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
CHRDL2-202ENST00000376324 FLT4P35916 1363 aa19.74■□□□□ 0.75
CHRDL2-202ENST00000376324 HOXC9P31274 260 aa19.73■□□□□ 0.75
CHRDL2-202ENST00000376324 ARHGEF25Q86VW2 580 aa19.73■□□□□ 0.75
CHRDL2-202ENST00000376324 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
CHRDL2-202ENST00000376324 INSRP06213 1382 aa19.72■□□□□ 0.75
CHRDL2-202ENST00000376324 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
CHRDL2-202ENST00000376324 U2AF1L5P0DN76 240 aaPredicted RBP19.71■□□□□ 0.75
CHRDL2-202ENST00000376324 U2AF1Q01081 240 aaKnown RBP eCLIP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms