RNA–Protein interactions for RNA: ENST00000376088.7

CLCN5-202, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 2 BASIC

Gene CLCN5, Length 10,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-202ENST00000376088 CARMIL1Q5VZK9 1371 aa6.28□□□□□ -1.4
CLCN5-202ENST00000376088 PAK3O75914 559 aaPredicted RBP6.28□□□□□ -1.4
CLCN5-202ENST00000376088 CCAR2Q8N163 923 aaKnown RBP6.28□□□□□ -1.4
CLCN5-202ENST00000376088 USH1CQ9Y6N9 552 aa6.28□□□□□ -1.4
CLCN5-202ENST00000376088 PLEKHG5O94827 1062 aa6.28□□□□□ -1.4
CLCN5-202ENST00000376088 KIF1CO43896 1103 aaKnown RBP6.28□□□□□ -1.4
CLCN5-202ENST00000376088 ERC1Q8IUD2 1116 aa6.28□□□□□ -1.4
CLCN5-202ENST00000376088 SMC2O95347 1197 aa6.27□□□□□ -1.4
CLCN5-202ENST00000376088 CEP120Q8N960 986 aa6.27□□□□□ -1.4
CLCN5-202ENST00000376088 DDX12PQ92771 950 aa6.27□□□□□ -1.4
CLCN5-202ENST00000376088 ARFGAP3Q9NP61 516 aa6.27□□□□□ -1.4
CLCN5-202ENST00000376088 RBM10P98175 930 aaKnown RBP6.27□□□□□ -1.41
CLCN5-202ENST00000376088 TTC31Q49AM3 519 aaPredicted RBP6.27□□□□□ -1.41
CLCN5-202ENST00000376088 TERF2IPQ9NYB0 399 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 WIZO95785 1651 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 EHBP1Q8NDI1 1231 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 ERC2O15083 957 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 FYB1O15117 783 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 IMMTQ16891 758 aaKnown RBP6.27□□□□□ -1.41
CLCN5-202ENST00000376088 B4GALNT4Q76KP1 1039 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 RTF1Q92541 710 aaKnown RBP6.27□□□□□ -1.41
CLCN5-202ENST00000376088 CUX2O14529 1486 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 CLSTN1O94985 981 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 DCAF11Q8TEB1 546 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 MSH5O43196 834 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 GIGYF2Q6Y7W6 1299 aaKnown RBP6.27□□□□□ -1.41
CLCN5-202ENST00000376088 BICD2Q8TD16 824 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 SNX21Q969T3 373 aa6.27□□□□□ -1.41
CLCN5-202ENST00000376088 SLMAPQ14BN4 828 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 RPAINQ86UA6 219 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 ZNF397Q8NF99 534 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 LRRC9Q6ZRR7 1453 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 MPHOSPH10O00566 681 aaKnown RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 SYCP1Q15431 976 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 CT47A1Q5JQC4 288 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 PPP4R3BQ5MIZ7 849 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 ZSCAN31Q96LW9 406 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 NOL7Q9UMY1 257 aaKnown RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 MYOM3Q5VTT5 1437 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 SMARCA4P51532 1647 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 CEP57L1Q8IYX8 460 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 CCDC150Q8NCX0 1101 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 CTCFLQ8NI51 663 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 NKTRP30414 1462 aaKnown RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 HFM1A2PYH4 1435 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 SOGA1O94964 1423 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 VGFO15240 615 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 MNAT1P51948 309 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 TRDNQ13061 729 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 HSP90AB3PQ58FF7 597 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 TRIM6-TRIM34B2RNG4 842 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 TRIM29Q14134 588 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 CCDC148Q8NFR7 591 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 PLPPR3Q6T4P5 718 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 STAG3Q9UJ98 1225 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 CCDC9Q9Y3X0 531 aaKnown RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 KIF3CO14782 793 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 HDGFL2Q7Z4V5 671 aaPredicted RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 ESF1Q9H501 851 aaKnown RBP6.26□□□□□ -1.41
CLCN5-202ENST00000376088 TIAM1Q13009 1591 aa6.26□□□□□ -1.41
CLCN5-202ENST00000376088 SPECC1LQ69YQ0 1117 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 WDR63Q8IWG1 891 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 WDR66Q8TBY9 1149 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 CAMSAP2Q08AD1 1489 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 ELP1O95163 1332 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 L3MBTL2Q969R5 705 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 EHBP1L1Q8N3D4 1523 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 P3H3Q8IVL6 736 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 TRIM34Q9BYJ4 488 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 RUNDC1Q96C34 613 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 POLR1AO95602 1720 aaPredicted RBP6.25□□□□□ -1.41
CLCN5-202ENST00000376088 ATP8B1O43520 1251 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 SFPQP23246 707 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLCN5-202ENST00000376088 ANKRD45Q5TZF3 282 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 RSRC1Q96IZ7 334 aaKnown RBP6.25□□□□□ -1.41
CLCN5-202ENST00000376088 FAM114A1Q8IWE2 563 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLCN5-202ENST00000376088 TXLNAP40222 546 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 ZMYM4Q5VZL5 1548 aa6.25□□□□□ -1.41
CLCN5-202ENST00000376088 MYRIPQ8NFW9 859 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 SUDS3Q9H7L9 328 aaPredicted RBP6.24□□□□□ -1.41
CLCN5-202ENST00000376088 ARFGAP2Q8N6H7 521 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 NAA15Q9BXJ9 866 aaKnown RBP6.24□□□□□ -1.41
CLCN5-202ENST00000376088 WDR97A6NE52 1622 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 ARHGAP25P42331 645 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 SAFBQ15424 915 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLCN5-202ENST00000376088 SYNE3Q6ZMZ3 975 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 MRVI1Q9Y6F6 885 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 FGD6Q6ZV73 1430 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 SDF4Q9BRK5 362 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 DDX19AQ9NUU7 478 aaKnown RBP6.24□□□□□ -1.41
CLCN5-202ENST00000376088 EBAG9O00559 213 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 XBP1P17861 261 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 DMTNQ08495 405 aa6.24□□□□□ -1.41
CLCN5-202ENST00000376088 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.24□□□□□ -1.41
CLCN5-202ENST00000376088 CEP112Q8N8E3 955 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms