RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 ROCK1Q13464 1354 aa23.64■■□□□ 1.37
COL15A1-201ENST00000375001 GOLGA6L10A6NI86 522 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 CBX1P83916 185 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 CASKIN1Q8WXD9 1431 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 ERC2O15083 957 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 ERLIN1O75477 346 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 GGNBP2Q9H3C7 697 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 PTPRGP23470 1445 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 FILIP1LQ4L180 1135 aa23.63■■□□□ 1.37
COL15A1-201ENST00000375001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.63■■□□□ 1.37
COL15A1-201ENST00000375001 KDM4AO75164 1064 aa23.62■■□□□ 1.37
COL15A1-201ENST00000375001 RALYLQ86SE5 291 aaKnown RBP23.62■■□□□ 1.37
COL15A1-201ENST00000375001 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
COL15A1-201ENST00000375001 CCDC192P0DO97 292 aa23.62■■□□□ 1.37
COL15A1-201ENST00000375001 AMOTL1Q8IY63 956 aa23.61■■□□□ 1.37
COL15A1-201ENST00000375001 MTHFSP49914 203 aa23.61■■□□□ 1.37
COL15A1-201ENST00000375001 TEFQ10587 303 aa23.61■■□□□ 1.37
COL15A1-201ENST00000375001 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
COL15A1-201ENST00000375001 GNAI1P63096 354 aa23.61■■□□□ 1.37
COL15A1-201ENST00000375001 FAM193AP78312 1265 aa23.6■■□□□ 1.37
COL15A1-201ENST00000375001 CEBPZQ03701 1054 aaKnown RBP23.6■■□□□ 1.37
COL15A1-201ENST00000375001 NBPF1Q3BBV0 1214 aa23.6■■□□□ 1.37
COL15A1-201ENST00000375001 RABEP1Q15276 862 aa23.6■■□□□ 1.37
COL15A1-201ENST00000375001 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
COL15A1-201ENST00000375001 SERPINC1P01008 464 aa23.6■■□□□ 1.37
COL15A1-201ENST00000375001 NEFHP12036 1026 aa23.6■■□□□ 1.37
COL15A1-201ENST00000375001 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
COL15A1-201ENST00000375001 PSMA5P28066 241 aa23.59■■□□□ 1.37
COL15A1-201ENST00000375001 ATP2B1P20020 1258 aa23.58■■□□□ 1.37
COL15A1-201ENST00000375001 ZSCAN30Q86W11 494 aa23.58■■□□□ 1.37
COL15A1-201ENST00000375001 CCDC102AQ96A19 550 aa23.58■■□□□ 1.37
COL15A1-201ENST00000375001 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
COL15A1-201ENST00000375001 DYDC1Q8WWB3 177 aa23.57■■□□□ 1.36
COL15A1-201ENST00000375001 GIMAP7Q8NHV1 300 aa23.57■■□□□ 1.36
COL15A1-201ENST00000375001 HSP90AB4PQ58FF6 505 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 CCDC43Q96MW1 224 aaKnown RBP23.56■■□□□ 1.36
COL15A1-201ENST00000375001 MCM2P49736 904 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 C1orf141Q5JVX7 400 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 PDCP20941 246 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 NOL10Q9BSC4 688 aaKnown RBP23.56■■□□□ 1.36
COL15A1-201ENST00000375001 CFTRP13569 1480 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 MCM4P33991 863 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 PDE3AQ14432 1141 aa23.56■■□□□ 1.36
COL15A1-201ENST00000375001 ZRSR2Q15696 482 aaKnown RBP23.56■■□□□ 1.36
COL15A1-201ENST00000375001 TNMDQ9H2S6 317 aa23.55■■□□□ 1.36
COL15A1-201ENST00000375001 TRERF1Q96PN7 1200 aa23.55■■□□□ 1.36
COL15A1-201ENST00000375001 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
COL15A1-201ENST00000375001 CGNQ9P2M7 1197 aaKnown RBP23.55■■□□□ 1.36
COL15A1-201ENST00000375001 ERLIN2O94905 339 aa23.54■■□□□ 1.36
COL15A1-201ENST00000375001 CABP2Q9NPB3 220 aa23.54■■□□□ 1.36
COL15A1-201ENST00000375001 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
COL15A1-201ENST00000375001 TAX1BP1Q86VP1 789 aa23.54■■□□□ 1.36
COL15A1-201ENST00000375001 TRHP20396 242 aaPredicted RBP23.54■■□□□ 1.36
COL15A1-201ENST00000375001 IBSPP21815 317 aaPredicted RBP23.54■■□□□ 1.36
COL15A1-201ENST00000375001 WASHC4Q2M389 1173 aa23.53■■□□□ 1.36
COL15A1-201ENST00000375001 ENOX2Q16206 610 aaKnown RBP23.53■■□□□ 1.36
COL15A1-201ENST00000375001 CCDC181Q5TID7 509 aa23.53■■□□□ 1.36
COL15A1-201ENST00000375001 STK38Q15208 465 aa23.53■■□□□ 1.36
COL15A1-201ENST00000375001 BRMS1Q9HCU9 246 aa23.53■■□□□ 1.36
COL15A1-201ENST00000375001 TRIM34Q9BYJ4 488 aa23.52■■□□□ 1.36
COL15A1-201ENST00000375001 INCENPQ9NQS7 918 aa23.52■■□□□ 1.36
COL15A1-201ENST00000375001 MAGEC2Q9UBF1 373 aaPredicted RBP23.52■■□□□ 1.36
COL15A1-201ENST00000375001 PPFIBP1Q86W92 1011 aa23.52■■□□□ 1.36
COL15A1-201ENST00000375001 C1orf115Q9H7X2 142 aa23.52■■□□□ 1.36
COL15A1-201ENST00000375001 CWC22Q9HCG8 908 aaKnown RBP23.52■■□□□ 1.36
COL15A1-201ENST00000375001 ANKRD62A6NC57 917 aa23.51■■□□□ 1.35
COL15A1-201ENST00000375001 ZNHIT6Q9NWK9 470 aaKnown RBP23.51■■□□□ 1.35
COL15A1-201ENST00000375001 TSPYL4Q9UJ04 414 aa23.51■■□□□ 1.35
COL15A1-201ENST00000375001 ZHX1Q9UKY1 873 aaPredicted RBP23.51■■□□□ 1.35
COL15A1-201ENST00000375001 LRRCC1Q9C099 1032 aa23.51■■□□□ 1.35
COL15A1-201ENST00000375001 UBXN4Q92575 508 aa23.51■■□□□ 1.35
COL15A1-201ENST00000375001 NEUROD6Q96NK8 337 aa23.51■■□□□ 1.35
COL15A1-201ENST00000375001 DHX8Q14562 1220 aaKnown RBP23.5■■□□□ 1.35
COL15A1-201ENST00000375001 FILIP1Q7Z7B0 1213 aa23.5■■□□□ 1.35
COL15A1-201ENST00000375001 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
COL15A1-201ENST00000375001 CFAP70Q5T0N1 1121 aa23.5■■□□□ 1.35
COL15A1-201ENST00000375001 CNTROBQ8N137 903 aa23.5■■□□□ 1.35
COL15A1-201ENST00000375001 ZNF396Q96N95 335 aaPredicted RBP23.5■■□□□ 1.35
COL15A1-201ENST00000375001 K7ELQ4 463 aaPredicted RBP23.5■■□□□ 1.35
COL15A1-201ENST00000375001 TSR2Q969E8 191 aaKnown RBP23.5■■□□□ 1.35
COL15A1-201ENST00000375001 XBP1P17861 261 aa23.49■■□□□ 1.35
COL15A1-201ENST00000375001 STAC3Q96MF2 364 aa23.49■■□□□ 1.35
COL15A1-201ENST00000375001 ZMYND15Q9H091 742 aa23.49■■□□□ 1.35
COL15A1-201ENST00000375001 NINLQ9Y2I6 1382 aa23.49■■□□□ 1.35
COL15A1-201ENST00000375001 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
COL15A1-201ENST00000375001 FSD1Q9BTV5 496 aa23.49■■□□□ 1.35
COL15A1-201ENST00000375001 DDX58O95786 925 aaKnown RBP23.48■■□□□ 1.35
COL15A1-201ENST00000375001 PDCL3Q9H2J4 239 aa23.48■■□□□ 1.35
COL15A1-201ENST00000375001 TMCO3Q6UWJ1 677 aa23.48■■□□□ 1.35
COL15A1-201ENST00000375001 CTDP1Q9Y5B0 961 aaPredicted RBP23.48■■□□□ 1.35
COL15A1-201ENST00000375001 VPS37DQ86XT2 251 aa23.47■■□□□ 1.35
COL15A1-201ENST00000375001 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
COL15A1-201ENST00000375001 SEPT7Q16181 437 aaKnown RBP23.47■■□□□ 1.35
COL15A1-201ENST00000375001 WDR33Q9C0J8 1336 aaKnown RBP23.46■■□□□ 1.35
COL15A1-201ENST00000375001 NOB1Q9ULX3 412 aaKnown RBP23.46■■□□□ 1.35
COL15A1-201ENST00000375001 LRRFIP2Q9Y608 721 aaKnown RBP23.46■■□□□ 1.35
COL15A1-201ENST00000375001 SKAP1Q86WV1 359 aa23.46■■□□□ 1.35
COL15A1-201ENST00000375001 UBE2Q2Q8WVN8 375 aa23.46■■□□□ 1.35
COL15A1-201ENST00000375001 GPATCH11Q8N954 259 aa23.46■■□□□ 1.35
COL15A1-201ENST00000375001 PIP4K2AP48426 406 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms