RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
COL21A1-202ENST00000370817 MAST1Q9Y2H9 1570 aa12.74□□□□□ -0.37
COL21A1-202ENST00000370817 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
COL21A1-202ENST00000370817 FGD6Q6ZV73 1430 aa12.73□□□□□ -0.37
COL21A1-202ENST00000370817 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
COL21A1-202ENST00000370817 ADAMTSL3P82987 1691 aa12.73□□□□□ -0.37
COL21A1-202ENST00000370817 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
COL21A1-202ENST00000370817 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
COL21A1-202ENST00000370817 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
COL21A1-202ENST00000370817 RNF40O75150 1001 aa12.72□□□□□ -0.37
COL21A1-202ENST00000370817 PTGDRQ13258 359 aa12.71□□□□□ -0.37
COL21A1-202ENST00000370817 AFAP1Q8N556 730 aa12.71□□□□□ -0.37
COL21A1-202ENST00000370817 SEMA3EO15041 775 aa12.7□□□□□ -0.38
COL21A1-202ENST00000370817 HDGFP51858 240 aaKnown RBP12.7□□□□□ -0.38
COL21A1-202ENST00000370817 SWT1Q5T5J6 900 aaKnown RBP12.7□□□□□ -0.38
COL21A1-202ENST00000370817 EYA1Q99502 592 aa12.7□□□□□ -0.38
COL21A1-202ENST00000370817 ATP10AO60312 1499 aa12.7□□□□□ -0.38
COL21A1-202ENST00000370817 C9orf84Q5VXU9 1444 aa12.7□□□□□ -0.38
COL21A1-202ENST00000370817 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL21A1-202ENST00000370817 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
COL21A1-202ENST00000370817 ZNF777Q9ULD5 760 aaPredicted RBP12.69□□□□□ -0.38
COL21A1-202ENST00000370817 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
COL21A1-202ENST00000370817 AGLP35573 1532 aa12.68□□□□□ -0.38
COL21A1-202ENST00000370817 SHANK2Q9UPX8 1470 aa12.68□□□□□ -0.38
COL21A1-202ENST00000370817 APLP1P51693 650 aa12.67□□□□□ -0.38
COL21A1-202ENST00000370817 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
COL21A1-202ENST00000370817 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
COL21A1-202ENST00000370817 MTRQ99707 1265 aa12.66□□□□□ -0.38
COL21A1-202ENST00000370817 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
COL21A1-202ENST00000370817 ABCC5O15440 1437 aa12.64□□□□□ -0.39
COL21A1-202ENST00000370817 SPAG9O60271 1321 aaKnown RBP12.63□□□□□ -0.39
COL21A1-202ENST00000370817 DAPK1P53355 1430 aa12.63□□□□□ -0.39
COL21A1-202ENST00000370817 EIF2AK4Q9P2K8 1649 aaKnown RBP12.63□□□□□ -0.39
COL21A1-202ENST00000370817 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
COL21A1-202ENST00000370817 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
COL21A1-202ENST00000370817 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
COL21A1-202ENST00000370817 RIMS1Q86UR5 1692 aaKnown RBP12.63□□□□□ -0.39
COL21A1-202ENST00000370817 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
COL21A1-202ENST00000370817 A2MP01023 1474 aa12.62□□□□□ -0.39
COL21A1-202ENST00000370817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL21A1-202ENST00000370817 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
COL21A1-202ENST00000370817 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
COL21A1-202ENST00000370817 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
COL21A1-202ENST00000370817 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
COL21A1-202ENST00000370817 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
COL21A1-202ENST00000370817 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
COL21A1-202ENST00000370817 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
COL21A1-202ENST00000370817 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
COL21A1-202ENST00000370817 MROH2AA6NES4 1674 aa12.6□□□□□ -0.39
COL21A1-202ENST00000370817 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
COL21A1-202ENST00000370817 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
COL21A1-202ENST00000370817 FCHSD2O94868 740 aa12.58□□□□□ -0.4
COL21A1-202ENST00000370817 DNAJB2P25686 324 aa12.58□□□□□ -0.4
COL21A1-202ENST00000370817 PTPRKQ15262 1439 aa12.58□□□□□ -0.4
COL21A1-202ENST00000370817 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
COL21A1-202ENST00000370817 DUOX2Q9NRD8 1548 aa12.57□□□□□ -0.4
COL21A1-202ENST00000370817 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-202ENST00000370817 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
COL21A1-202ENST00000370817 C3P01024 1663 aa12.57□□□□□ -0.4
COL21A1-202ENST00000370817 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
COL21A1-202ENST00000370817 TMEM134Q9H6X4 195 aa12.56□□□□□ -0.4
COL21A1-202ENST00000370817 CLTCQ00610 1675 aaKnown RBP12.56□□□□□ -0.4
COL21A1-202ENST00000370817 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
COL21A1-202ENST00000370817 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
COL21A1-202ENST00000370817 ZC3H13Q5T200 1668 aaKnown RBP12.54□□□□□ -0.4
COL21A1-202ENST00000370817 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
COL21A1-202ENST00000370817 PTPRMP28827 1452 aa12.54□□□□□ -0.4
COL21A1-202ENST00000370817 RCCD1A6NED2 376 aa12.54□□□□□ -0.4
COL21A1-202ENST00000370817 COPS2P61201 443 aa12.54□□□□□ -0.4
COL21A1-202ENST00000370817 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
COL21A1-202ENST00000370817 BCANQ96GW7 911 aa12.54□□□□□ -0.4
COL21A1-202ENST00000370817 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
COL21A1-202ENST00000370817 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
COL21A1-202ENST00000370817 TSPY4P0CV99 314 aa12.53□□□□□ -0.4
COL21A1-202ENST00000370817 TSPY10P0CW01 314 aa12.53□□□□□ -0.4
COL21A1-202ENST00000370817 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
COL21A1-202ENST00000370817 CEP152O94986 1710 aa12.53□□□□□ -0.4
COL21A1-202ENST00000370817 ERBINQ96RT1 1412 aa12.53□□□□□ -0.4
COL21A1-202ENST00000370817 NKX2-3Q8TAU0 364 aa12.52□□□□□ -0.41
COL21A1-202ENST00000370817 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
COL21A1-202ENST00000370817 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.41
COL21A1-202ENST00000370817 ARID4BQ4LE39 1312 aaPredicted RBP12.51□□□□□ -0.41
COL21A1-202ENST00000370817 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
COL21A1-202ENST00000370817 VWDEQ8N2E2 1590 aa12.51□□□□□ -0.41
COL21A1-202ENST00000370817 FAM50AQ14320 339 aaKnown RBP12.5□□□□□ -0.41
COL21A1-202ENST00000370817 UNC13BO14795 1591 aa12.5□□□□□ -0.41
COL21A1-202ENST00000370817 SETD1BQ9UPS6 1966 aaKnown RBP12.49□□□□□ -0.41
COL21A1-202ENST00000370817 ANKRD30AQ9BXX3 1397 aa12.49□□□□□ -0.41
COL21A1-202ENST00000370817 HIC1Q14526 733 aa12.49□□□□□ -0.41
COL21A1-202ENST00000370817 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
COL21A1-202ENST00000370817 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
COL21A1-202ENST00000370817 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
COL21A1-202ENST00000370817 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
COL21A1-202ENST00000370817 PXYLP1Q8TE99 480 aa12.48□□□□□ -0.41
COL21A1-202ENST00000370817 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
COL21A1-202ENST00000370817 PCDHB3Q9Y5E6 796 aa12.48□□□□□ -0.41
COL21A1-202ENST00000370817 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
COL21A1-202ENST00000370817 ABCC3O15438 1527 aa12.47□□□□□ -0.41
COL21A1-202ENST00000370817 ZPR1O75312 459 aa12.47□□□□□ -0.41
COL21A1-202ENST00000370817 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms