RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 WASLO00401 505 aaPredicted RBP19.56■□□□□ 0.72
PHTF1-202ENST00000369598 PANK2Q9BZ23 570 aa19.55■□□□□ 0.72
PHTF1-202ENST00000369598 FAM135BQ49AJ0 1406 aa19.54■□□□□ 0.72
PHTF1-202ENST00000369598 INSRP06213 1382 aa19.54■□□□□ 0.72
PHTF1-202ENST00000369598 SLIT1O75093 1534 aa19.54■□□□□ 0.72
PHTF1-202ENST00000369598 GLIPR1L2Q4G1C9 344 aa19.54■□□□□ 0.72
PHTF1-202ENST00000369598 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
PHTF1-202ENST00000369598 ARHGAP23Q9P227 1491 aa19.53■□□□□ 0.72
PHTF1-202ENST00000369598 HSP90AA2PQ14568 343 aaPredicted RBP19.53■□□□□ 0.72
PHTF1-202ENST00000369598 TECPR2O15040 1411 aa19.53■□□□□ 0.72
PHTF1-202ENST00000369598 TBX22Q9Y458 520 aa19.52■□□□□ 0.72
PHTF1-202ENST00000369598 C8orf34Q49A92 452 aa19.51■□□□□ 0.71
PHTF1-202ENST00000369598 NSD2O96028 1365 aa19.51■□□□□ 0.71
PHTF1-202ENST00000369598 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
PHTF1-202ENST00000369598 ROBO2Q9HCK4 1378 aa19.5■□□□□ 0.71
PHTF1-202ENST00000369598 PLEKHG5O94827 1062 aa19.5■□□□□ 0.71
PHTF1-202ENST00000369598 USP32Q8NFA0 1604 aa19.5■□□□□ 0.71
PHTF1-202ENST00000369598 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
PHTF1-202ENST00000369598 PNNQ9H307 717 aaKnown RBP19.5■□□□□ 0.71
PHTF1-202ENST00000369598 AMOTL2Q9Y2J4 779 aa19.5■□□□□ 0.71
PHTF1-202ENST00000369598 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
PHTF1-202ENST00000369598 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
PHTF1-202ENST00000369598 KNDC1Q76NI1 1749 aa19.49■□□□□ 0.71
PHTF1-202ENST00000369598 SEC24BO95487 1268 aa19.49■□□□□ 0.71
PHTF1-202ENST00000369598 MTHFSP49914 203 aa19.49■□□□□ 0.71
PHTF1-202ENST00000369598 MED14O60244 1454 aa19.48■□□□□ 0.71
PHTF1-202ENST00000369598 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
PHTF1-202ENST00000369598 FYB1O15117 783 aa19.48■□□□□ 0.71
PHTF1-202ENST00000369598 PDE3BQ13370 1112 aa19.48■□□□□ 0.71
PHTF1-202ENST00000369598 ARID3AQ99856 593 aa19.48■□□□□ 0.71
PHTF1-202ENST00000369598 POLR3AO14802 1390 aaPredicted RBP19.48■□□□□ 0.71
PHTF1-202ENST00000369598 CPS1P31327 1500 aa19.47■□□□□ 0.71
PHTF1-202ENST00000369598 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
PHTF1-202ENST00000369598 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
PHTF1-202ENST00000369598 CEP170BQ9Y4F5 1589 aaPredicted RBP19.46■□□□□ 0.71
PHTF1-202ENST00000369598 ANKLE2Q86XL3 938 aa19.46■□□□□ 0.71
PHTF1-202ENST00000369598 ADAMTSL3P82987 1691 aa19.45■□□□□ 0.7
PHTF1-202ENST00000369598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.45■□□□□ 0.7
PHTF1-202ENST00000369598 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
PHTF1-202ENST00000369598 HSP90AA1P07900 732 aaKnown RBP19.45■□□□□ 0.7
PHTF1-202ENST00000369598 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
PHTF1-202ENST00000369598 PPIP5K1Q6PFW1 1433 aa19.44■□□□□ 0.7
PHTF1-202ENST00000369598 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
PHTF1-202ENST00000369598 ATP7BP35670 1465 aa19.42■□□□□ 0.7
PHTF1-202ENST00000369598 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
PHTF1-202ENST00000369598 NUTM2FA1L443 756 aa19.41■□□□□ 0.7
PHTF1-202ENST00000369598 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.7
PHTF1-202ENST00000369598 APAF1O14727 1248 aa19.39■□□□□ 0.69
PHTF1-202ENST00000369598 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.69
PHTF1-202ENST00000369598 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
PHTF1-202ENST00000369598 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
PHTF1-202ENST00000369598 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.37■□□□□ 0.69
PHTF1-202ENST00000369598 CPSF1Q10570 1443 aaKnown RBP19.37■□□□□ 0.69
PHTF1-202ENST00000369598 KCNA6P17658 529 aa19.36■□□□□ 0.69
PHTF1-202ENST00000369598 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
PHTF1-202ENST00000369598 EDC4Q6P2E9 1401 aaKnown RBP19.35■□□□□ 0.69
PHTF1-202ENST00000369598 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
PHTF1-202ENST00000369598 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
PHTF1-202ENST00000369598 GOLGA6L3A6NEY3 463 aa19.34■□□□□ 0.69
PHTF1-202ENST00000369598 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.69
PHTF1-202ENST00000369598 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.69
PHTF1-202ENST00000369598 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.69
PHTF1-202ENST00000369598 NME9Q86XW9 330 aa19.33■□□□□ 0.69
PHTF1-202ENST00000369598 BCAR3O75815 825 aa19.33■□□□□ 0.68
PHTF1-202ENST00000369598 GOLGA2Q08379 1002 aa19.33■□□□□ 0.68
PHTF1-202ENST00000369598 KDM2BQ8NHM5 1336 aa19.33■□□□□ 0.68
PHTF1-202ENST00000369598 RUNDC1Q96C34 613 aa19.33■□□□□ 0.68
PHTF1-202ENST00000369598 ADGRB2O60241 1585 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 ACEP12821 1306 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 NGEFQ8N5V2 710 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 ZNF142P52746 1687 aaPredicted RBP19.32■□□□□ 0.68
PHTF1-202ENST00000369598 PLEKHG3A1L390 1219 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 IGHDP01880 384 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 CDC42BPGQ6DT37 1551 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 ANKRD26Q9UPS8 1709 aa19.32■□□□□ 0.68
PHTF1-202ENST00000369598 KIF20BQ96Q89 1820 aa19.31■□□□□ 0.68
PHTF1-202ENST00000369598 U2SURPO15042 1029 aaKnown RBP19.31■□□□□ 0.68
PHTF1-202ENST00000369598 COG3Q96JB2 828 aa19.31■□□□□ 0.68
PHTF1-202ENST00000369598 ZNF521Q96K83 1311 aa19.3■□□□□ 0.68
PHTF1-202ENST00000369598 FBLN1P23142 703 aa19.3■□□□□ 0.68
PHTF1-202ENST00000369598 L1TD1Q5T7N2 865 aaKnown RBP19.3■□□□□ 0.68
PHTF1-202ENST00000369598 ZRANB1Q9UGI0 708 aa19.3■□□□□ 0.68
PHTF1-202ENST00000369598 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
PHTF1-202ENST00000369598 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
PHTF1-202ENST00000369598 PODXL2Q9NZ53 605 aa19.29■□□□□ 0.68
PHTF1-202ENST00000369598 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
PHTF1-202ENST00000369598 DIAPH1O60610 1272 aaKnown RBP19.28■□□□□ 0.68
PHTF1-202ENST00000369598 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
PHTF1-202ENST00000369598 POLKQ9UBT6 870 aa19.28■□□□□ 0.68
PHTF1-202ENST00000369598 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
PHTF1-202ENST00000369598 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.67
PHTF1-202ENST00000369598 RBM10P98175 930 aaKnown RBP19.26■□□□□ 0.67
PHTF1-202ENST00000369598 BECN1Q14457 450 aa19.26■□□□□ 0.67
PHTF1-202ENST00000369598 NGDNQ8NEJ9 315 aaKnown RBP19.26■□□□□ 0.67
PHTF1-202ENST00000369598 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
PHTF1-202ENST00000369598 ITSN1Q15811 1721 aa19.26■□□□□ 0.67
PHTF1-202ENST00000369598 ZBTB7CA1YPR0 619 aa19.26■□□□□ 0.67
PHTF1-202ENST00000369598 SLFN5Q08AF3 891 aa19.26■□□□□ 0.67
PHTF1-202ENST00000369598 DUSP27Q5VZP5 1158 aa19.25■□□□□ 0.67
PHTF1-202ENST00000369598 RRP7AQ9Y3A4 280 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms