RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 NUDT12Q9BQG2 462 aa13.8□□□□□ -0.2
H3F3A-201ENST00000366813 TBC1D2Q9BYX2 928 aa13.79□□□□□ -0.2
H3F3A-201ENST00000366813 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
H3F3A-201ENST00000366813 SYNJ1O43426 1573 aa13.77□□□□□ -0.2
H3F3A-201ENST00000366813 MS4A1P11836 297 aa13.77□□□□□ -0.21
H3F3A-201ENST00000366813 SNIP1Q8TAD8 396 aaKnown RBP13.77□□□□□ -0.21
H3F3A-201ENST00000366813 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
H3F3A-201ENST00000366813 MTMR2Q13614 643 aa13.76□□□□□ -0.21
H3F3A-201ENST00000366813 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
H3F3A-201ENST00000366813 SPDYE5A6NIY4 337 aa13.75□□□□□ -0.21
H3F3A-201ENST00000366813 ST8SIA5O15466 376 aa13.75□□□□□ -0.21
H3F3A-201ENST00000366813 MRGPRX2Q96LB1 330 aa13.75□□□□□ -0.21
H3F3A-201ENST00000366813 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
H3F3A-201ENST00000366813 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
H3F3A-201ENST00000366813 PRR7Q8TB68 274 aa13.74□□□□□ -0.21
H3F3A-201ENST00000366813 SLC24A3Q9HC58 644 aa13.74□□□□□ -0.21
H3F3A-201ENST00000366813 WNT7BP56706 349 aa13.73□□□□□ -0.21
H3F3A-201ENST00000366813 PDE4DQ08499 809 aa13.73□□□□□ -0.21
H3F3A-201ENST00000366813 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
H3F3A-201ENST00000366813 CCNYL3P0C7X3 344 aa13.72□□□□□ -0.21
H3F3A-201ENST00000366813 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
H3F3A-201ENST00000366813 AXIN1O15169 862 aa13.71□□□□□ -0.21
H3F3A-201ENST00000366813 GJA5P36382 358 aa13.71□□□□□ -0.21
H3F3A-201ENST00000366813 PTCRAQ6ISU1 281 aaPredicted RBP13.71□□□□□ -0.21
H3F3A-201ENST00000366813 PRDM2Q13029 1718 aa13.71□□□□□ -0.22
H3F3A-201ENST00000366813 AVPP01185 164 aa13.7□□□□□ -0.22
H3F3A-201ENST00000366813 SKOR1P84550 965 aa13.7□□□□□ -0.22
H3F3A-201ENST00000366813 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
H3F3A-201ENST00000366813 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
H3F3A-201ENST00000366813 PTPRNQ16849 979 aa13.69□□□□□ -0.22
H3F3A-201ENST00000366813 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
H3F3A-201ENST00000366813 KIF13AQ9H1H9 1805 aa13.69□□□□□ -0.22
H3F3A-201ENST00000366813 POTECB2RU33 542 aa13.68□□□□□ -0.22
H3F3A-201ENST00000366813 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
H3F3A-201ENST00000366813 EVA1BQ9NVM1 165 aa13.68□□□□□ -0.22
H3F3A-201ENST00000366813 PCDHB15Q9Y5E8 787 aa13.68□□□□□ -0.22
H3F3A-201ENST00000366813 J3QL48 77 aa13.67□□□□□ -0.22
H3F3A-201ENST00000366813 SPTLC1O15269 473 aa13.67□□□□□ -0.22
H3F3A-201ENST00000366813 SMPD1P17405 629 aa13.67□□□□□ -0.22
H3F3A-201ENST00000366813 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
H3F3A-201ENST00000366813 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
H3F3A-201ENST00000366813 FAM69CQ0P6D2 419 aa13.66□□□□□ -0.22
H3F3A-201ENST00000366813 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
H3F3A-201ENST00000366813 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
H3F3A-201ENST00000366813 SOGA1O94964 1423 aa13.66□□□□□ -0.22
H3F3A-201ENST00000366813 CSPP1Q1MSJ5 1256 aa13.65□□□□□ -0.22
H3F3A-201ENST00000366813 DESI1Q6ICB0 168 aa13.65□□□□□ -0.22
H3F3A-201ENST00000366813 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
H3F3A-201ENST00000366813 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
H3F3A-201ENST00000366813 KCNH2Q12809 1159 aa13.64□□□□□ -0.23
H3F3A-201ENST00000366813 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
H3F3A-201ENST00000366813 HRCP23327 699 aa13.64□□□□□ -0.23
H3F3A-201ENST00000366813 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
H3F3A-201ENST00000366813 UNC93B1Q9H1C4 597 aa13.64□□□□□ -0.23
H3F3A-201ENST00000366813 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
H3F3A-201ENST00000366813 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
H3F3A-201ENST00000366813 CTHP32929 405 aa13.63□□□□□ -0.23
H3F3A-201ENST00000366813 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
H3F3A-201ENST00000366813 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
H3F3A-201ENST00000366813 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
H3F3A-201ENST00000366813 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
H3F3A-201ENST00000366813 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
H3F3A-201ENST00000366813 NUTM2AQ8IVF1 878 aaPredicted RBP13.62□□□□□ -0.23
H3F3A-201ENST00000366813 SH3BP2P78314 561 aa13.61□□□□□ -0.23
H3F3A-201ENST00000366813 PRPF38BQ5VTL8 546 aaKnown RBP13.61□□□□□ -0.23
H3F3A-201ENST00000366813 BAP1Q92560 729 aa13.61□□□□□ -0.23
H3F3A-201ENST00000366813 HECW2Q9P2P5 1572 aa13.6□□□□□ -0.23
H3F3A-201ENST00000366813 LINC01559Q495D7 138 aa13.6□□□□□ -0.23
H3F3A-201ENST00000366813 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
H3F3A-201ENST00000366813 CCDC88BA6NC98 1476 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 CFAP99D6REC4 459 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 MYSM1Q5VVJ2 828 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 TSC1Q92574 1164 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 HPS1Q92902 700 aa13.59□□□□□ -0.23
H3F3A-201ENST00000366813 WASF2Q9Y6W5 498 aa13.58□□□□□ -0.24
H3F3A-201ENST00000366813 C11orf95C9JLR9 678 aaPredicted RBP13.57□□□□□ -0.24
H3F3A-201ENST00000366813 GMPR2Q9P2T1 348 aaKnown RBP13.57□□□□□ -0.24
H3F3A-201ENST00000366813 KDM6BO15054 1643 aa13.57□□□□□ -0.24
H3F3A-201ENST00000366813 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
H3F3A-201ENST00000366813 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
H3F3A-201ENST00000366813 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
H3F3A-201ENST00000366813 SIAH2O43255 324 aa13.55□□□□□ -0.24
H3F3A-201ENST00000366813 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
H3F3A-201ENST00000366813 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
H3F3A-201ENST00000366813 ADGRL1O94910 1474 aa13.53□□□□□ -0.24
H3F3A-201ENST00000366813 ATP13A2Q9NQ11 1180 aa13.52□□□□□ -0.25
H3F3A-201ENST00000366813 POLR3EQ9NVU0 708 aa13.52□□□□□ -0.25
H3F3A-201ENST00000366813 VARSP26640 1264 aaKnown RBP13.51□□□□□ -0.25
H3F3A-201ENST00000366813 QPCTQ16769 361 aa13.51□□□□□ -0.25
H3F3A-201ENST00000366813 TUSC1Q2TAM9 212 aa13.51□□□□□ -0.25
H3F3A-201ENST00000366813 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
H3F3A-201ENST00000366813 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
H3F3A-201ENST00000366813 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
H3F3A-201ENST00000366813 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
H3F3A-201ENST00000366813 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
H3F3A-201ENST00000366813 LILRB3O75022 631 aa13.49□□□□□ -0.25
H3F3A-201ENST00000366813 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
H3F3A-201ENST00000366813 MAP10Q9P2G4 905 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms