RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 FMNL1O95466 1100 aaPredicted RBP7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 JUNDP17535 347 aa7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 PPP4CP60510 307 aa7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 LSM11P83369 360 aaKnown RBP eCLIP7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 KANK4Q5T7N3 995 aaPredicted RBP7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 ANKK1Q8NFD2 765 aa7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 ZC3H4Q9UPT8 1303 aaKnown RBP7.95□□□□□ -1.14
RNU6-1339P-201ENST00000363574 SOWAHBA6NEL2 793 aa7.94□□□□□ -1.14
RNU6-1339P-201ENST00000363574 PTPRNQ16849 979 aa7.94□□□□□ -1.14
RNU6-1339P-201ENST00000363574 HS3ST6Q96QI5 342 aa7.94□□□□□ -1.14
RNU6-1339P-201ENST00000363574 VRTNQ9H8Y1 702 aa7.94□□□□□ -1.14
RNU6-1339P-201ENST00000363574 HPS5Q9UPZ3 1129 aa7.94□□□□□ -1.14
RNU6-1339P-201ENST00000363574 MTMR7Q9Y216 660 aa7.94□□□□□ -1.14
RNU6-1339P-201ENST00000363574 BCAMP50895 628 aa7.93□□□□□ -1.14
RNU6-1339P-201ENST00000363574 NFATC2IPQ8NCF5 419 aa7.93□□□□□ -1.14
RNU6-1339P-201ENST00000363574 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
RNU6-1339P-201ENST00000363574 NR1I2O75469 434 aa7.92□□□□□ -1.14
RNU6-1339P-201ENST00000363574 TSR3Q9UJK0 312 aaKnown RBP7.92□□□□□ -1.14
RNU6-1339P-201ENST00000363574 ELOAQ14241 798 aaKnown RBP7.91□□□□□ -1.14
RNU6-1339P-201ENST00000363574 ZMIZ1Q9ULJ6 1067 aa7.91□□□□□ -1.14
RNU6-1339P-201ENST00000363574 IVNS1ABPQ9Y6Y0 642 aa7.91□□□□□ -1.14
RNU6-1339P-201ENST00000363574 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 USP17L5A8MUK1 530 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 SKIP12755 728 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 CTHP32929 405 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 MSS51Q4VC12 460 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 USP17L2Q6R6M4 530 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 PLEKHM2Q8IWE5 1019 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 FAM174AQ8TBP5 190 aa7.9□□□□□ -1.14
RNU6-1339P-201ENST00000363574 DXOO77932 396 aaKnown RBP7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 CCNYL3P0C7X3 344 aa7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 TMEM164Q5U3C3 297 aa7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 LHX8Q68G74 356 aa7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 FAM160A2Q8N612 972 aaPredicted RBP7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 STK32AQ8WU08 396 aa7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 OCSTAMPQ9BR26 566 aa7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 GPSM3Q9Y4H4 160 aa7.89□□□□□ -1.15
RNU6-1339P-201ENST00000363574 FOXD4L5Q5VV16 416 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1339P-201ENST00000363574 FOXD4L4Q8WXT5 416 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1339P-201ENST00000363574 EVA1BQ9NVM1 165 aa7.88□□□□□ -1.15
RNU6-1339P-201ENST00000363574 NOVA2Q9UNW9 492 aaKnown RBP7.88□□□□□ -1.15
RNU6-1339P-201ENST00000363574 MMP16P51512 607 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 PTK2Q05397 1052 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 KCNH2Q12809 1159 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 DEPDC4Q8N2C3 294 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 WNT2BQ93097 391 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 STAC3Q96MF2 364 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 NUDT12Q9BQG2 462 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
RNU6-1339P-201ENST00000363574 SND1Q7KZF4 910 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 PHTF2Q8N3S3 785 aa7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 SPSB2Q99619 263 aa7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 PRDM9Q9NQV7 894 aa7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 WBP1LQ9NX94 342 aa7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 GNEQ9Y223 722 aaKnown RBP7.86□□□□□ -1.15
RNU6-1339P-201ENST00000363574 FAM196BA6NMK8 535 aa7.85□□□□□ -1.15
RNU6-1339P-201ENST00000363574 CRTC2Q53ET0 693 aaPredicted RBP7.85□□□□□ -1.15
RNU6-1339P-201ENST00000363574 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
RNU6-1339P-201ENST00000363574 ANKRD13DQ6ZTN6 518 aa7.85□□□□□ -1.15
RNU6-1339P-201ENST00000363574 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L15C9J2P7 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L10C9JJH3 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L13C9JLJ4 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L12C9JPN9 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L11C9JVI0 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L21D6R901 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L18D6R9N7 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L22D6RA61 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L17D6RBQ6 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L19D6RCP7 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L20D6RJB6 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 MCCD1P59942 119 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 USP17L24Q0WX57 530 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 NCOA4Q13772 614 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 SLFNL1Q499Z3 407 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 NBPF14Q5TI25 921 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 RNF135Q8IUD6 432 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 ZNF592Q92610 1267 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 FAM163AQ96GL9 167 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 PCDHB9Q9Y5E1 797 aa7.84□□□□□ -1.15
RNU6-1339P-201ENST00000363574 COPS2P61201 443 aa7.83□□□□□ -1.16
RNU6-1339P-201ENST00000363574 PTK7Q13308 1070 aa7.83□□□□□ -1.16
RNU6-1339P-201ENST00000363574 CCDC27Q2M243 656 aa7.83□□□□□ -1.16
RNU6-1339P-201ENST00000363574 PHLDB3Q6NSJ2 640 aa7.83□□□□□ -1.16
RNU6-1339P-201ENST00000363574 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
RNU6-1339P-201ENST00000363574 CHIC2Q9UKJ5 165 aa7.83□□□□□ -1.16
RNU6-1339P-201ENST00000363574 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
RNU6-1339P-201ENST00000363574 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
RNU6-1339P-201ENST00000363574 SLAIN2Q9P270 581 aa7.82□□□□□ -1.16
RNU6-1339P-201ENST00000363574 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
RNU6-1339P-201ENST00000363574 TLL1O43897 1013 aa7.81□□□□□ -1.16
RNU6-1339P-201ENST00000363574 LZTS3O60299 673 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms