RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 BRMS1Q9HCU9 246 aa15.96■□□□□ 0.15
CCDC144A-203ENST00000360495 NUTM2FA1L443 756 aa15.96■□□□□ 0.15
CCDC144A-203ENST00000360495 TMCO3Q6UWJ1 677 aa15.96■□□□□ 0.15
CCDC144A-203ENST00000360495 PPFIBP1Q86W92 1011 aa15.96■□□□□ 0.15
CCDC144A-203ENST00000360495 INCENPQ9NQS7 918 aa15.96■□□□□ 0.15
CCDC144A-203ENST00000360495 ADAMTS8Q9UP79 889 aa15.96■□□□□ 0.15
CCDC144A-203ENST00000360495 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.14
CCDC144A-203ENST00000360495 MAGEC2Q9UBF1 373 aaPredicted RBP15.96■□□□□ 0.14
CCDC144A-203ENST00000360495 CCDC181Q5TID7 509 aa15.95■□□□□ 0.14
CCDC144A-203ENST00000360495 DYDC1Q8WWB3 177 aa15.95■□□□□ 0.14
CCDC144A-203ENST00000360495 ZNHIT6Q9NWK9 470 aaKnown RBP15.95■□□□□ 0.14
CCDC144A-203ENST00000360495 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
CCDC144A-203ENST00000360495 DDX58O95786 925 aaKnown RBP15.95■□□□□ 0.14
CCDC144A-203ENST00000360495 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 PDE3AQ14432 1141 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 NOL10Q9BSC4 688 aaKnown RBP15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 XBP1P17861 261 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 KDM4AO75164 1064 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 KRT85P78386 507 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 TRERF1Q96PN7 1200 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
CCDC144A-203ENST00000360495 NEFHP12036 1026 aa15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 GCC1Q96CN9 775 aa15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 WASHC4Q2M389 1173 aa15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 ATP2B1P20020 1258 aa15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 UBTFL1P0CB47 393 aaPredicted RBP15.93■□□□□ 0.14
CCDC144A-203ENST00000360495 FHOD3Q2V2M9 1422 aa15.92■□□□□ 0.14
CCDC144A-203ENST00000360495 SYCE3A1L190 88 aa15.92■□□□□ 0.14
CCDC144A-203ENST00000360495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCDC144A-203ENST00000360495 CCDC43Q96MW1 224 aaKnown RBP15.92■□□□□ 0.14
CCDC144A-203ENST00000360495 ENOX2Q16206 610 aaKnown RBP15.92■□□□□ 0.14
CCDC144A-203ENST00000360495 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
CCDC144A-203ENST00000360495 TAX1BP1Q86VP1 789 aa15.91■□□□□ 0.14
CCDC144A-203ENST00000360495 TSPYL4Q9UJ04 414 aa15.91■□□□□ 0.14
CCDC144A-203ENST00000360495 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
CCDC144A-203ENST00000360495 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
CCDC144A-203ENST00000360495 NUP62CLQ9H1M0 184 aa15.91■□□□□ 0.14
CCDC144A-203ENST00000360495 NEUROD6Q96NK8 337 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 ME1P48163 572 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 SHTN1A0MZ66 631 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 IQCEQ6IPM2 695 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 CEP57L1Q8IYX8 460 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 JMYQ8N9B5 988 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 DACH1Q9UI36 760 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 GPATCH11Q8N954 259 aa15.9■□□□□ 0.14
CCDC144A-203ENST00000360495 KIF2AO00139 706 aaPredicted RBP15.89■□□□□ 0.13
CCDC144A-203ENST00000360495 C1orf115Q9H7X2 142 aa15.89■□□□□ 0.13
CCDC144A-203ENST00000360495 PTPN14Q15678 1187 aa15.89■□□□□ 0.13
CCDC144A-203ENST00000360495 CLASRPQ8N2M8 674 aaKnown RBP15.89■□□□□ 0.13
CCDC144A-203ENST00000360495 IBSPP21815 317 aaPredicted RBP15.89■□□□□ 0.13
CCDC144A-203ENST00000360495 LRRFIP2Q9Y608 721 aaKnown RBP15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 GBP3Q9H0R5 595 aa15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 BCAR3O75815 825 aa15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 SEPT7Q16181 437 aaKnown RBP15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 SURF6O75683 361 aaKnown RBP15.88■□□□□ 0.13
CCDC144A-203ENST00000360495 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 CRACR2AQ9BSW2 395 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 WASHC2CQ9Y4E1 1318 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 TXLNAP40222 546 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 SPATA32Q96LK8 384 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 UPF3BQ9BZI7 483 aaKnown RBP15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 HMOX1P09601 288 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 ANKRD62A6NC57 917 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 HIP1O00291 1037 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 GTF2F1P35269 517 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
CCDC144A-203ENST00000360495 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 POLR3GO15318 223 aaPredicted RBP15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 GNAI3P08754 354 aa15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 STK3Q13188 491 aa15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 IPO4Q8TEX9 1081 aaKnown RBP15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 KIF18AQ8NI77 898 aa15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 TXLNBQ8N3L3 684 aa15.86■□□□□ 0.13
CCDC144A-203ENST00000360495 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
CCDC144A-203ENST00000360495 ANKRD1Q15327 319 aa15.85■□□□□ 0.13
CCDC144A-203ENST00000360495 MAP3K11Q16584 847 aa15.85■□□□□ 0.13
CCDC144A-203ENST00000360495 SART3Q15020 963 aaKnown RBP15.84■□□□□ 0.13
CCDC144A-203ENST00000360495 ARHGAP29Q52LW3 1261 aa15.84■□□□□ 0.13
CCDC144A-203ENST00000360495 CTDP1Q9Y5B0 961 aaPredicted RBP15.84■□□□□ 0.13
CCDC144A-203ENST00000360495 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
CCDC144A-203ENST00000360495 TICAM2Q86XR7 235 aa15.84■□□□□ 0.13
CCDC144A-203ENST00000360495 RBM33Q96EV2 1170 aaKnown RBP15.84■□□□□ 0.13
CCDC144A-203ENST00000360495 NOB1Q9ULX3 412 aaKnown RBP15.83■□□□□ 0.12
CCDC144A-203ENST00000360495 SPDYE4A6NLX3 237 aa15.83■□□□□ 0.12
CCDC144A-203ENST00000360495 SYCP1Q15431 976 aa15.83■□□□□ 0.12
CCDC144A-203ENST00000360495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.83■□□□□ 0.12
CCDC144A-203ENST00000360495 DYNC1I1O14576 645 aa15.83■□□□□ 0.12
CCDC144A-203ENST00000360495 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
CCDC144A-203ENST00000360495 DNAJC2Q99543 621 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms