RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 CDAN1Q8IWY9 1227 aa10.12□□□□□ -0.79
HHLA3-201ENST00000359875 C19orf44Q9H6X5 657 aa10.12□□□□□ -0.79
HHLA3-201ENST00000359875 DCCP43146 1447 aa10.12□□□□□ -0.79
HHLA3-201ENST00000359875 SETBP1Q9Y6X0 1596 aa10.12□□□□□ -0.79
HHLA3-201ENST00000359875 JCADQ9P266 1359 aa10.12□□□□□ -0.79
HHLA3-201ENST00000359875 SPHKAPQ2M3C7 1700 aa10.11□□□□□ -0.79
HHLA3-201ENST00000359875 EMP3P54852 163 aa10.11□□□□□ -0.79
HHLA3-201ENST00000359875 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
HHLA3-201ENST00000359875 RBM33Q96EV2 1170 aaKnown RBP10.11□□□□□ -0.79
HHLA3-201ENST00000359875 ATF3P18847 181 aa10.1□□□□□ -0.79
HHLA3-201ENST00000359875 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
HHLA3-201ENST00000359875 HOXB3P14651 431 aaPredicted RBP10.09□□□□□ -0.79
HHLA3-201ENST00000359875 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
HHLA3-201ENST00000359875 RGS17Q9UGC6 210 aaPredicted RBP10.09□□□□□ -0.79
HHLA3-201ENST00000359875 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
HHLA3-201ENST00000359875 PHLPP1O60346 1717 aa10.09□□□□□ -0.79
HHLA3-201ENST00000359875 SPATA31A6Q5VVP1 1343 aa10.08□□□□□ -0.8
HHLA3-201ENST00000359875 NAIPQ13075 1403 aa10.08□□□□□ -0.8
HHLA3-201ENST00000359875 COL16A1Q07092 1604 aaPredicted RBP10.08□□□□□ -0.8
HHLA3-201ENST00000359875 AHDC1Q5TGY3 1603 aaPredicted RBP10.08□□□□□ -0.8
HHLA3-201ENST00000359875 XRN1Q8IZH2 1706 aaKnown RBP10.08□□□□□ -0.8
HHLA3-201ENST00000359875 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
HHLA3-201ENST00000359875 NRXN3Q9Y4C0 1643 aa10.07□□□□□ -0.8
HHLA3-201ENST00000359875 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
HHLA3-201ENST00000359875 ZNF326Q5BKZ1 582 aaKnown RBP10.07□□□□□ -0.8
HHLA3-201ENST00000359875 NUTM2DQ5VT03 806 aaPredicted RBP10.07□□□□□ -0.8
HHLA3-201ENST00000359875 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
HHLA3-201ENST00000359875 PTPRUQ92729 1446 aa10.07□□□□□ -0.8
HHLA3-201ENST00000359875 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
HHLA3-201ENST00000359875 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
HHLA3-201ENST00000359875 NEXMIFQ5QGS0 1516 aa10.06□□□□□ -0.8
HHLA3-201ENST00000359875 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
HHLA3-201ENST00000359875 RPGRIP1LQ68CZ1 1315 aa10.05□□□□□ -0.8
HHLA3-201ENST00000359875 SHPRHQ149N8 1683 aa10.04□□□□□ -0.8
HHLA3-201ENST00000359875 PPARGC1BQ86YN6 1023 aaKnown RBP10.04□□□□□ -0.8
HHLA3-201ENST00000359875 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
HHLA3-201ENST00000359875 ADGRL3Q9HAR2 1447 aa10.04□□□□□ -0.8
HHLA3-201ENST00000359875 METP08581 1390 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 ASXL1Q8IXJ9 1541 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 MST1RQ04912 1400 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 PTCH1Q13635 1447 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
HHLA3-201ENST00000359875 POTEAQ6S8J7 498 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 BRINP3Q76B58 766 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 ACIN1Q9UKV3 1341 aaKnown RBP10.03□□□□□ -0.8
HHLA3-201ENST00000359875 KIF1BO60333 1816 aa10.03□□□□□ -0.8
HHLA3-201ENST00000359875 SETD5Q9C0A6 1442 aa10.02□□□□□ -0.81
HHLA3-201ENST00000359875 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
HHLA3-201ENST00000359875 LRP6O75581 1613 aa10□□□□□ -0.81
HHLA3-201ENST00000359875 FAM205CA6NFA0 338 aa10□□□□□ -0.81
HHLA3-201ENST00000359875 MEX3CQ5U5Q3 659 aaKnown RBP10□□□□□ -0.81
HHLA3-201ENST00000359875 TRIM52Q96A61 297 aa10□□□□□ -0.81
HHLA3-201ENST00000359875 LRRC59Q96AG4 307 aaKnown RBP10□□□□□ -0.81
HHLA3-201ENST00000359875 NHSL1Q5SYE7 1610 aa10□□□□□ -0.81
HHLA3-201ENST00000359875 KIF3CO14782 793 aa9.99□□□□□ -0.81
HHLA3-201ENST00000359875 HS3ST6Q96QI5 342 aa9.99□□□□□ -0.81
HHLA3-201ENST00000359875 NALCNQ8IZF0 1738 aa9.98□□□□□ -0.81
HHLA3-201ENST00000359875 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
HHLA3-201ENST00000359875 CDK12Q9NYV4 1490 aaPredicted RBP9.98□□□□□ -0.81
HHLA3-201ENST00000359875 LAMC1P11047 1609 aa9.97□□□□□ -0.81
HHLA3-201ENST00000359875 SETD1AO15047 1707 aaKnown RBP9.97□□□□□ -0.81
HHLA3-201ENST00000359875 C2orf72A6NCS6 295 aa9.97□□□□□ -0.81
HHLA3-201ENST00000359875 ERBB3P21860 1342 aa9.97□□□□□ -0.81
HHLA3-201ENST00000359875 ANKRD30BQ9BXX2 1392 aa9.97□□□□□ -0.81
HHLA3-201ENST00000359875 C1orf167Q5SNV9 1468 aa9.97□□□□□ -0.81
HHLA3-201ENST00000359875 ROBO2Q9HCK4 1378 aa9.96□□□□□ -0.82
HHLA3-201ENST00000359875 PPLO60437 1756 aa9.96□□□□□ -0.82
HHLA3-201ENST00000359875 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
HHLA3-201ENST00000359875 PNPLA6Q8IY17 1366 aa9.95□□□□□ -0.82
HHLA3-201ENST00000359875 TECPR2O15040 1411 aa9.95□□□□□ -0.82
HHLA3-201ENST00000359875 CDC42BPGQ6DT37 1551 aa9.94□□□□□ -0.82
HHLA3-201ENST00000359875 SPATA31E1Q6ZUB1 1445 aa9.94□□□□□ -0.82
HHLA3-201ENST00000359875 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
HHLA3-201ENST00000359875 PPP1R37O75864 691 aa9.94□□□□□ -0.82
HHLA3-201ENST00000359875 SLC34A2O95436 690 aa9.94□□□□□ -0.82
HHLA3-201ENST00000359875 RXRBP28702 533 aa9.94□□□□□ -0.82
HHLA3-201ENST00000359875 NUTM2BA6NNL0 878 aaPredicted RBP9.93□□□□□ -0.82
HHLA3-201ENST00000359875 NUTM2EB1AL46 878 aaPredicted RBP9.93□□□□□ -0.82
HHLA3-201ENST00000359875 NUTM2AQ8IVF1 878 aaPredicted RBP9.93□□□□□ -0.82
HHLA3-201ENST00000359875 AFF2P51816 1311 aa9.92□□□□□ -0.82
HHLA3-201ENST00000359875 MPHOSPH9Q99550 1183 aa9.92□□□□□ -0.82
HHLA3-201ENST00000359875 PIK3C2GO75747 1445 aa9.91□□□□□ -0.82
HHLA3-201ENST00000359875 LRPPRCP42704 1394 aaKnown RBP9.91□□□□□ -0.82
HHLA3-201ENST00000359875 ABCC11Q96J66 1382 aa9.91□□□□□ -0.82
HHLA3-201ENST00000359875 NPHP3Q7Z494 1330 aa9.91□□□□□ -0.82
HHLA3-201ENST00000359875 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
HHLA3-201ENST00000359875 C8orf37Q96NL8 207 aa9.9□□□□□ -0.82
HHLA3-201ENST00000359875 ORAI2Q96SN7 254 aa9.9□□□□□ -0.82
HHLA3-201ENST00000359875 IFT172Q9UG01 1749 aa9.9□□□□□ -0.83
HHLA3-201ENST00000359875 COL22A1Q8NFW1 1626 aaPredicted RBP9.89□□□□□ -0.83
HHLA3-201ENST00000359875 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
HHLA3-201ENST00000359875 ARSIQ5FYB1 569 aa9.89□□□□□ -0.83
HHLA3-201ENST00000359875 DDX17Q92841 729 aaKnown RBP9.89□□□□□ -0.83
HHLA3-201ENST00000359875 SIRT1Q96EB6 747 aa9.89□□□□□ -0.83
HHLA3-201ENST00000359875 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
HHLA3-201ENST00000359875 KNDC1Q76NI1 1749 aa9.89□□□□□ -0.83
HHLA3-201ENST00000359875 MYOM2P54296 1465 aa9.88□□□□□ -0.83
HHLA3-201ENST00000359875 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
HHLA3-201ENST00000359875 NKX1-1Q15270 411 aaPredicted RBP9.88□□□□□ -0.83
HHLA3-201ENST00000359875 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms