RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PRDM11Q9NQV5 511 aa23.56■■□□□ 1.36
IFT20-202ENST00000357896 ACIN1Q9UKV3 1341 aaKnown RBP23.56■■□□□ 1.36
IFT20-202ENST00000357896 DLC1Q96QB1 1528 aa23.55■■□□□ 1.36
IFT20-202ENST00000357896 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
IFT20-202ENST00000357896 PARD3Q8TEW0 1356 aa23.53■■□□□ 1.36
IFT20-202ENST00000357896 TRPM3Q9HCF6 1732 aaPredicted RBP23.53■■□□□ 1.36
IFT20-202ENST00000357896 THSD7AQ9UPZ6 1657 aa23.52■■□□□ 1.36
IFT20-202ENST00000357896 PAK3O75914 559 aaPredicted RBP23.52■■□□□ 1.36
IFT20-202ENST00000357896 TRIM37O94972 964 aa23.52■■□□□ 1.36
IFT20-202ENST00000357896 NGDNQ8NEJ9 315 aaKnown RBP23.52■■□□□ 1.36
IFT20-202ENST00000357896 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
IFT20-202ENST00000357896 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
IFT20-202ENST00000357896 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
IFT20-202ENST00000357896 SPATA31A1Q5TZJ5 1347 aa23.51■■□□□ 1.35
IFT20-202ENST00000357896 APBA3O96018 575 aa23.5■■□□□ 1.35
IFT20-202ENST00000357896 TNS1Q9HBL0 1735 aaKnown RBP23.5■■□□□ 1.35
IFT20-202ENST00000357896 WASLO00401 505 aaPredicted RBP23.48■■□□□ 1.35
IFT20-202ENST00000357896 TRAK1Q9UPV9 953 aa23.48■■□□□ 1.35
IFT20-202ENST00000357896 PRR36Q9H6K5 1346 aa23.48■■□□□ 1.35
IFT20-202ENST00000357896 YY1P25490 414 aa23.47■■□□□ 1.35
IFT20-202ENST00000357896 NBPF8Q3BBV2 869 aa23.47■■□□□ 1.35
IFT20-202ENST00000357896 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
IFT20-202ENST00000357896 MINK1Q8N4C8 1332 aaPredicted RBP23.47■■□□□ 1.35
IFT20-202ENST00000357896 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
IFT20-202ENST00000357896 STRN4Q9NRL3 753 aa23.46■■□□□ 1.35
IFT20-202ENST00000357896 KIAA0232Q92628 1395 aa23.45■■□□□ 1.34
IFT20-202ENST00000357896 PDE3BQ13370 1112 aa23.45■■□□□ 1.34
IFT20-202ENST00000357896 CHRNA2Q15822 529 aa23.43■■□□□ 1.34
IFT20-202ENST00000357896 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
IFT20-202ENST00000357896 DCAF8L1A6NGE4 600 aa23.42■■□□□ 1.34
IFT20-202ENST00000357896 EVA1CP58658 441 aa23.42■■□□□ 1.34
IFT20-202ENST00000357896 ADGRB1O14514 1584 aa23.42■■□□□ 1.34
IFT20-202ENST00000357896 CRYBG1Q9Y4K1 1723 aa23.42■■□□□ 1.34
IFT20-202ENST00000357896 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
IFT20-202ENST00000357896 ZC3H6P61129 1189 aaKnown RBP23.4■■□□□ 1.34
IFT20-202ENST00000357896 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
IFT20-202ENST00000357896 SPON1Q9HCB6 807 aa23.38■■□□□ 1.33
IFT20-202ENST00000357896 NUDT16Q96DE0 195 aaKnown RBP23.37■■□□□ 1.33
IFT20-202ENST00000357896 ATP7BP35670 1465 aa23.36■■□□□ 1.33
IFT20-202ENST00000357896 C11orf95C9JLR9 678 aaPredicted RBP23.36■■□□□ 1.33
IFT20-202ENST00000357896 TCP11L2Q8N4U5 519 aa23.35■■□□□ 1.33
IFT20-202ENST00000357896 STAC3Q96MF2 364 aa23.35■■□□□ 1.33
IFT20-202ENST00000357896 SSH2Q76I76 1423 aa23.34■■□□□ 1.33
IFT20-202ENST00000357896 KCNQ2O43526 872 aa23.34■■□□□ 1.33
IFT20-202ENST00000357896 RREB1Q92766 1687 aa23.33■■□□□ 1.33
IFT20-202ENST00000357896 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.33
IFT20-202ENST00000357896 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
IFT20-202ENST00000357896 THRAP3Q9Y2W1 955 aaKnown RBP23.33■■□□□ 1.33
IFT20-202ENST00000357896 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
IFT20-202ENST00000357896 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
IFT20-202ENST00000357896 DCAF11Q8TEB1 546 aa23.32■■□□□ 1.32
IFT20-202ENST00000357896 ITSN1Q15811 1721 aa23.31■■□□□ 1.32
IFT20-202ENST00000357896 PHRF1Q9P1Y6 1649 aaKnown RBP23.31■■□□□ 1.32
IFT20-202ENST00000357896 NUP188Q5SRE5 1749 aa23.3■■□□□ 1.32
IFT20-202ENST00000357896 CPDO75976 1380 aa23.29■■□□□ 1.32
IFT20-202ENST00000357896 ABTB2Q8N961 1025 aa23.29■■□□□ 1.32
IFT20-202ENST00000357896 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
IFT20-202ENST00000357896 POLR3AO14802 1390 aaPredicted RBP23.28■■□□□ 1.32
IFT20-202ENST00000357896 CDK19Q9BWU1 502 aa23.28■■□□□ 1.32
IFT20-202ENST00000357896 ACEP12821 1306 aa23.28■■□□□ 1.32
IFT20-202ENST00000357896 CAMTA1Q9Y6Y1 1673 aa23.27■■□□□ 1.32
IFT20-202ENST00000357896 PLEKHG3A1L390 1219 aa23.25■■□□□ 1.31
IFT20-202ENST00000357896 PLSCR1O15162 318 aa23.24■■□□□ 1.31
IFT20-202ENST00000357896 NLRP13Q86W25 1043 aa23.24■■□□□ 1.31
IFT20-202ENST00000357896 GCP02774 474 aa23.22■■□□□ 1.31
IFT20-202ENST00000357896 USP19O94966 1318 aa23.22■■□□□ 1.31
IFT20-202ENST00000357896 NRKQ7Z2Y5 1582 aa23.22■■□□□ 1.31
IFT20-202ENST00000357896 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
IFT20-202ENST00000357896 OVOS2A0A0J9YW53 1432 aa23.21■■□□□ 1.31
IFT20-202ENST00000357896 OVOS2Q6IE36 1432 aa23.21■■□□□ 1.31
IFT20-202ENST00000357896 LMO7Q8WWI1 1683 aa23.2■■□□□ 1.3
IFT20-202ENST00000357896 ARHGEF28Q8N1W1 1705 aaKnown RBP23.19■■□□□ 1.3
IFT20-202ENST00000357896 CRB1P82279 1406 aa23.19■■□□□ 1.3
IFT20-202ENST00000357896 PARP4Q9UKK3 1724 aaKnown RBP23.19■■□□□ 1.3
IFT20-202ENST00000357896 COL5A2P05997 1499 aaPredicted RBP23.18■■□□□ 1.3
IFT20-202ENST00000357896 DDB1Q16531 1140 aa23.17■■□□□ 1.3
IFT20-202ENST00000357896 BCL11BQ9C0K0 894 aaPredicted RBP23.17■■□□□ 1.3
IFT20-202ENST00000357896 RAB3GAP2Q9H2M9 1393 aa23.16■■□□□ 1.3
IFT20-202ENST00000357896 TOPAZ1Q8N9V7 1692 aa23.16■■□□□ 1.3
IFT20-202ENST00000357896 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
IFT20-202ENST00000357896 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.3
IFT20-202ENST00000357896 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.3
IFT20-202ENST00000357896 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
IFT20-202ENST00000357896 AATKQ6ZMQ8 1374 aa23.13■■□□□ 1.29
IFT20-202ENST00000357896 TOM1L2Q6ZVM7 507 aa23.12■■□□□ 1.29
IFT20-202ENST00000357896 PEAK1Q9H792 1746 aa23.12■■□□□ 1.29
IFT20-202ENST00000357896 ZBTB7CA1YPR0 619 aa23.11■■□□□ 1.29
IFT20-202ENST00000357896 SRPK2P78362 688 aaKnown RBP23.11■■□□□ 1.29
IFT20-202ENST00000357896 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
IFT20-202ENST00000357896 ZBTB7AO95365 584 aa23.1■■□□□ 1.29
IFT20-202ENST00000357896 PPIP5K1Q6PFW1 1433 aa23.09■■□□□ 1.29
IFT20-202ENST00000357896 NLRP6P59044 892 aa23.09■■□□□ 1.29
IFT20-202ENST00000357896 PROM2Q8N271 834 aa23.09■■□□□ 1.29
IFT20-202ENST00000357896 ZNF784Q8NCA9 323 aaPredicted RBP23.09■■□□□ 1.29
IFT20-202ENST00000357896 PTGER2P43116 358 aa23.08■■□□□ 1.29
IFT20-202ENST00000357896 CASZ1Q86V15 1759 aa23.08■■□□□ 1.29
IFT20-202ENST00000357896 BCL9O00512 1426 aa23.08■■□□□ 1.28
IFT20-202ENST00000357896 PDGFDQ9GZP0 370 aaPredicted RBP23.07■■□□□ 1.28
IFT20-202ENST00000357896 STK32BQ9NY57 414 aa23.07■■□□□ 1.28
IFT20-202ENST00000357896 UTRNP46939 3433 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms