RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PLEKHO1Q53GL0 409 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-202ENST00000356435 IL27Q8NEV9 243 aa6.64□□□□□ -1.35
PTPRD-202ENST00000356435 ARGLU1Q9NWB6 273 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-202ENST00000356435 ZRSR2Q15696 482 aaKnown RBP6.64□□□□□ -1.35
PTPRD-202ENST00000356435 STAC3Q96MF2 364 aa6.64□□□□□ -1.35
PTPRD-202ENST00000356435 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-202ENST00000356435 HIP1O00291 1037 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 FOSBP53539 338 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 FOXD4L6Q3SYB3 417 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 FOXD4L3Q6VB84 417 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 MTMR7Q9Y216 660 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 RRP9O43818 475 aaKnown RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 TTC39AQ5SRH9 613 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 CNTROBQ8N137 903 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 GAS2L2Q8NHY3 880 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 RUNDC1Q96C34 613 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 MAGEC2Q9UBF1 373 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 PLIN1O60240 522 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 WDHD1O75717 1129 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 DESP17661 470 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 CALRP27797 417 aaKnown RBP6.63□□□□□ -1.35
PTPRD-202ENST00000356435 ERC1Q8IUD2 1116 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 ANKRD18AQ8IVF6 992 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 POGZQ7Z3K3 1410 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 ARHGAP5Q13017 1502 aa6.63□□□□□ -1.35
PTPRD-202ENST00000356435 TCOF1Q13428 1488 aaKnown RBP6.62□□□□□ -1.35
PTPRD-202ENST00000356435 CFAP43Q8NDM7 1665 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 DNAI2Q9GZS0 605 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 STRN4Q9NRL3 753 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 PRDM2Q13029 1718 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 MPHOSPH10O00566 681 aaKnown RBP6.62□□□□□ -1.35
PTPRD-202ENST00000356435 TATP17735 454 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-202ENST00000356435 RBM5P52756 815 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPRD-202ENST00000356435 MNS1Q8NEH6 495 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 LRPPRCP42704 1394 aaKnown RBP6.62□□□□□ -1.35
PTPRD-202ENST00000356435 NACAP1Q9BZK3 213 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 ANKRD30BQ9BXX2 1392 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 SLC4A3P48751 1232 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 NLRP6P59044 892 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 NUTM2GQ5VZR2 741 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 TXLNBQ8N3L3 684 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 CCDC30Q5VVM6 783 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 DNAJC2Q99543 621 aaKnown RBP6.62□□□□□ -1.35
PTPRD-202ENST00000356435 HSP90B2PQ58FF3 399 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 CCDC158Q5M9N0 1113 aa6.62□□□□□ -1.35
PTPRD-202ENST00000356435 CDC45O75419 566 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 CNNM1Q9NRU3 951 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 CCP110O43303 1012 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 SMARCE1Q969G3 411 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 ERCC4Q92889 916 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-202ENST00000356435 SCAPERQ9BY12 1400 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 COG6Q9Y2V7 657 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-202ENST00000356435 ABTB2Q8N961 1025 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 ZMYM3Q14202 1370 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 NEBLO76041 1014 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
PTPRD-202ENST00000356435 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 GNAI3P08754 354 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 NUTM2BA6NNL0 878 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-202ENST00000356435 NUTM2EB1AL46 878 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-202ENST00000356435 ATP2B2Q01814 1243 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 NUTM2AQ8IVF1 878 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-202ENST00000356435 CHMP5Q9NZZ3 219 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 EXOC6Q8TAG9 804 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 ZNF396Q96N95 335 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-202ENST00000356435 PDILTQ8N807 584 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 TMOD2Q9NZR1 351 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 NUCB2P80303 420 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 NOM1Q5C9Z4 860 aaKnown RBP6.6□□□□□ -1.35
PTPRD-202ENST00000356435 PDCL3Q9H2J4 239 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 GAPVD1Q14C86 1478 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 SPATA31E1Q6ZUB1 1445 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 CABP4P57796 275 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 CCDC191Q8NCU4 936 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 MAP7D2Q96T17 732 aa6.6□□□□□ -1.35
PTPRD-202ENST00000356435 PCF11O94913 1555 aaKnown RBP6.59□□□□□ -1.35
PTPRD-202ENST00000356435 ERLIN2O94905 339 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 SOGA3Q5TF21 947 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
PTPRD-202ENST00000356435 HMOX1P09601 288 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 HSP90AA2PQ14568 343 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-202ENST00000356435 ZSCAN25Q6NSZ9 544 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 IFT57Q9NWB7 429 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 FILIP1LQ4L180 1135 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 TOM1L2Q6ZVM7 507 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 ZNF771Q7L3S4 317 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-202ENST00000356435 STIM1Q13586 685 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 ABCA10Q8WWZ4 1543 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 BRPF3Q9ULD4 1205 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 JMYQ8N9B5 988 aa6.59□□□□□ -1.35
PTPRD-202ENST00000356435 THEMISQ8N1K5 641 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 DHX29Q7Z478 1369 aaKnown RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 APAF1O14727 1248 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 LETM1O95202 739 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-202ENST00000356435 CCDC57Q2TAC2 916 aa6.58□□□□□ -1.36
PTPRD-202ENST00000356435 MTERF4Q7Z6M4 381 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms