RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 U2AF1L5P0DN76 240 aaPredicted RBP9.5□□□□□ -0.89
HTT-201ENST00000355072 U2AF1Q01081 240 aaKnown RBP eCLIP9.5□□□□□ -0.89
HTT-201ENST00000355072 TMCO5BA8MYB1 307 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 PYM1Q9BRP8 204 aaKnown RBP9.5□□□□□ -0.89
HTT-201ENST00000355072 SARNPP82979 210 aaKnown RBP9.5□□□□□ -0.89
HTT-201ENST00000355072 LIG1P18858 919 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
HTT-201ENST00000355072 SMTNL1A8MU46 457 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 CRACR2AQ9BSW2 395 aa9.5□□□□□ -0.89
HTT-201ENST00000355072 HFM1A2PYH4 1435 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 CCDC50Q8IVM0 306 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 GRPEL1Q9HAV7 217 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 UQCRHLA0A096LP55 91 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 UQCRHP07919 91 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 TIAM1Q13009 1591 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
HTT-201ENST00000355072 ANKRD30BQ9BXX2 1392 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 ANKRD18BA2A2Z9 1011 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
HTT-201ENST00000355072 TRAK2O60296 914 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 TERF1P54274 439 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
HTT-201ENST00000355072 SMC2O95347 1197 aa9.49□□□□□ -0.89
HTT-201ENST00000355072 CLASRPQ8N2M8 674 aaKnown RBP9.49□□□□□ -0.89
HTT-201ENST00000355072 PPP1R12BO60237 982 aaPredicted RBP9.48□□□□□ -0.89
HTT-201ENST00000355072 SH2D4BQ5SQS7 431 aa9.48□□□□□ -0.89
HTT-201ENST00000355072 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
HTT-201ENST00000355072 SEPT6Q14141 434 aa9.48□□□□□ -0.89
HTT-201ENST00000355072 POLR1AO95602 1720 aaPredicted RBP9.48□□□□□ -0.89
HTT-201ENST00000355072 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
HTT-201ENST00000355072 SCAND2PQ9GZW5 306 aaPredicted RBP9.48□□□□□ -0.89
HTT-201ENST00000355072 OFD1O75665 1012 aa9.48□□□□□ -0.89
HTT-201ENST00000355072 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
HTT-201ENST00000355072 CCDC181Q5TID7 509 aa9.48□□□□□ -0.89
HTT-201ENST00000355072 TACO1Q9BSH4 297 aaKnown RBP9.48□□□□□ -0.89
HTT-201ENST00000355072 CPSF2Q9P2I0 782 aaKnown RBP9.47□□□□□ -0.89
HTT-201ENST00000355072 DDX58O95786 925 aaKnown RBP9.47□□□□□ -0.89
HTT-201ENST00000355072 SRPK2P78362 688 aaKnown RBP9.47□□□□□ -0.89
HTT-201ENST00000355072 SEPT7Q16181 437 aaKnown RBP9.47□□□□□ -0.89
HTT-201ENST00000355072 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 UBXN4Q92575 508 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 SYCP1Q15431 976 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 RNF214Q8ND24 703 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 TOP2BQ02880 1626 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 GNAI1P63096 354 aa9.47□□□□□ -0.89
HTT-201ENST00000355072 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
HTT-201ENST00000355072 HOXA7P31268 230 aaPredicted RBP9.46□□□□□ -0.89
HTT-201ENST00000355072 TAF7LQ5H9L4 462 aa9.46□□□□□ -0.89
HTT-201ENST00000355072 C14orf37Q86TY3 774 aa9.46□□□□□ -0.89
HTT-201ENST00000355072 ENOX2Q16206 610 aaKnown RBP9.46□□□□□ -0.89
HTT-201ENST00000355072 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
HTT-201ENST00000355072 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.9
HTT-201ENST00000355072 CETN2P41208 172 aa9.46□□□□□ -0.9
HTT-201ENST00000355072 CCAR1Q8IX12 1150 aaKnown RBP9.46□□□□□ -0.9
HTT-201ENST00000355072 SFPQP23246 707 aaKnown RBP eCLIP9.46□□□□□ -0.9
HTT-201ENST00000355072 AK9Q5TCS8 1911 aa9.46□□□□□ -0.9
HTT-201ENST00000355072 ARID3AQ99856 593 aa9.46□□□□□ -0.9
HTT-201ENST00000355072 NKTRP30414 1462 aaKnown RBP9.45□□□□□ -0.9
HTT-201ENST00000355072 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 KRT32Q14532 448 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 SMC1AQ14683 1233 aaKnown RBP9.45□□□□□ -0.9
HTT-201ENST00000355072 SDF4Q9BRK5 362 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 GOLIM4O00461 696 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 HSP90AB2PQ58FF8 381 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 MPHOSPH9Q99550 1183 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 NAA15Q9BXJ9 866 aaKnown RBP9.45□□□□□ -0.9
HTT-201ENST00000355072 RALYLQ86SE5 291 aaKnown RBP9.45□□□□□ -0.9
HTT-201ENST00000355072 WDR66Q8TBY9 1149 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 KRT85P78386 507 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 WASF1Q92558 559 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 TTC14Q96N46 770 aa9.45□□□□□ -0.9
HTT-201ENST00000355072 PAIP2Q9BPZ3 127 aaKnown RBP9.45□□□□□ -0.9
HTT-201ENST00000355072 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 CLUL1Q15846 466 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 SOGA1O94964 1423 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 C11orf95C9JLR9 678 aaPredicted RBP9.44□□□□□ -0.9
HTT-201ENST00000355072 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 CCDC38Q502W7 563 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 ARHGAP29Q52LW3 1261 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
HTT-201ENST00000355072 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 LRRC9Q6ZRR7 1453 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 MIPOL1Q8TD10 442 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 CCDC171Q6TFL3 1326 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 CLGNO14967 610 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
HTT-201ENST00000355072 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 NAP1L1P55209 391 aaKnown RBP9.44□□□□□ -0.9
HTT-201ENST00000355072 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
HTT-201ENST00000355072 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms