RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 BTG4Q9NY30 223 aa14.28□□□□□ -0.12
MRPL55-204ENST00000348259 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.12
MRPL55-204ENST00000348259 ACIN1Q9UKV3 1341 aaKnown RBP14.27□□□□□ -0.12
MRPL55-204ENST00000348259 PMFBP1Q8TBY8 1022 aa14.27□□□□□ -0.13
MRPL55-204ENST00000348259 TOPAZ1Q8N9V7 1692 aa14.26□□□□□ -0.13
MRPL55-204ENST00000348259 ATP7BP35670 1465 aa14.26□□□□□ -0.13
MRPL55-204ENST00000348259 HAP1P54257 671 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-204ENST00000348259 EN1Q05925 392 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-204ENST00000348259 CCDC9Q9Y3X0 531 aaKnown RBP14.25□□□□□ -0.13
MRPL55-204ENST00000348259 LMO7Q8WWI1 1683 aa14.25□□□□□ -0.13
MRPL55-204ENST00000348259 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
MRPL55-204ENST00000348259 EIF3AQ14152 1382 aaKnown RBP14.23□□□□□ -0.13
MRPL55-204ENST00000348259 FAM182BQ5T319 152 aa14.23□□□□□ -0.13
MRPL55-204ENST00000348259 CAMKK2Q96RR4 588 aa14.23□□□□□ -0.13
MRPL55-204ENST00000348259 NRKQ7Z2Y5 1582 aa14.22□□□□□ -0.13
MRPL55-204ENST00000348259 SPATA31A1Q5TZJ5 1347 aa14.22□□□□□ -0.13
MRPL55-204ENST00000348259 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
MRPL55-204ENST00000348259 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
MRPL55-204ENST00000348259 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-204ENST00000348259 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
MRPL55-204ENST00000348259 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.14
MRPL55-204ENST00000348259 R3HDM1Q15032 1099 aaKnown RBP14.2□□□□□ -0.14
MRPL55-204ENST00000348259 EZH2Q15910 746 aaKnown RBP14.2□□□□□ -0.14
MRPL55-204ENST00000348259 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
MRPL55-204ENST00000348259 PARP4Q9UKK3 1724 aaKnown RBP14.2□□□□□ -0.14
MRPL55-204ENST00000348259 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
MRPL55-204ENST00000348259 RGPD3A6NKT7 1758 aaPredicted RBP14.19□□□□□ -0.14
MRPL55-204ENST00000348259 RGPD4Q7Z3J3 1758 aa14.19□□□□□ -0.14
MRPL55-204ENST00000348259 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
MRPL55-204ENST00000348259 POGKQ9P215 609 aa14.19□□□□□ -0.14
MRPL55-204ENST00000348259 CAMTA1Q9Y6Y1 1673 aa14.19□□□□□ -0.14
MRPL55-204ENST00000348259 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
MRPL55-204ENST00000348259 TRAK1Q9UPV9 953 aa14.18□□□□□ -0.14
MRPL55-204ENST00000348259 POLR3AO14802 1390 aaPredicted RBP14.18□□□□□ -0.14
MRPL55-204ENST00000348259 A0A0G2JS52 829 aa14.17□□□□□ -0.14
MRPL55-204ENST00000348259 MYT1Q01538 1121 aa14.17□□□□□ -0.14
MRPL55-204ENST00000348259 PRDM11Q9NQV5 511 aa14.17□□□□□ -0.14
MRPL55-204ENST00000348259 SBF2Q86WG5 1849 aa14.17□□□□□ -0.14
MRPL55-204ENST00000348259 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
MRPL55-204ENST00000348259 FAM196AQ6ZSG2 479 aa14.16□□□□□ -0.14
MRPL55-204ENST00000348259 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
MRPL55-204ENST00000348259 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
MRPL55-204ENST00000348259 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
MRPL55-204ENST00000348259 CPDO75976 1380 aa14.15□□□□□ -0.14
MRPL55-204ENST00000348259 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
MRPL55-204ENST00000348259 TRIM37O94972 964 aa14.14□□□□□ -0.15
MRPL55-204ENST00000348259 USP19O94966 1318 aa14.14□□□□□ -0.15
MRPL55-204ENST00000348259 CLSPNQ9HAW4 1339 aa14.14□□□□□ -0.15
MRPL55-204ENST00000348259 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
MRPL55-204ENST00000348259 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
MRPL55-204ENST00000348259 CHRNA2Q15822 529 aa14.13□□□□□ -0.15
MRPL55-204ENST00000348259 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
MRPL55-204ENST00000348259 NUDT16Q96DE0 195 aaKnown RBP14.13□□□□□ -0.15
MRPL55-204ENST00000348259 COL18A1P39060 1754 aa14.12□□□□□ -0.15
MRPL55-204ENST00000348259 LRRC37A3O60309 1634 aa14.12□□□□□ -0.15
MRPL55-204ENST00000348259 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
MRPL55-204ENST00000348259 STAC3Q96MF2 364 aa14.11□□□□□ -0.15
MRPL55-204ENST00000348259 COL5A2P05997 1499 aaPredicted RBP14.11□□□□□ -0.15
MRPL55-204ENST00000348259 APBA3O96018 575 aa14.1□□□□□ -0.15
MRPL55-204ENST00000348259 UTRNP46939 3433 aa14.1□□□□□ -0.15
MRPL55-204ENST00000348259 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-204ENST00000348259 ZC3H6P61129 1189 aaKnown RBP14.09□□□□□ -0.15
MRPL55-204ENST00000348259 SLIT3O75094 1523 aa14.09□□□□□ -0.15
MRPL55-204ENST00000348259 ACEP12821 1306 aa14.09□□□□□ -0.15
MRPL55-204ENST00000348259 NBPF8Q3BBV2 869 aa14.08□□□□□ -0.16
MRPL55-204ENST00000348259 LARP1Q6PKG0 1096 aaKnown RBP14.08□□□□□ -0.16
MRPL55-204ENST00000348259 STRN4Q9NRL3 753 aa14.08□□□□□ -0.16
MRPL55-204ENST00000348259 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
MRPL55-204ENST00000348259 DCAF11Q8TEB1 546 aa14.07□□□□□ -0.16
MRPL55-204ENST00000348259 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
MRPL55-204ENST00000348259 THRAP3Q9Y2W1 955 aaKnown RBP14.07□□□□□ -0.16
MRPL55-204ENST00000348259 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
MRPL55-204ENST00000348259 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
MRPL55-204ENST00000348259 PIK3C2AO00443 1686 aa14.05□□□□□ -0.16
MRPL55-204ENST00000348259 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
MRPL55-204ENST00000348259 KDM2AQ9Y2K7 1162 aa14.05□□□□□ -0.16
MRPL55-204ENST00000348259 BCL9O00512 1426 aa14.05□□□□□ -0.16
MRPL55-204ENST00000348259 CRB1P82279 1406 aa14.05□□□□□ -0.16
MRPL55-204ENST00000348259 PDE3BQ13370 1112 aa14.04□□□□□ -0.16
MRPL55-204ENST00000348259 USP35Q9P2H5 1018 aa14.04□□□□□ -0.16
MRPL55-204ENST00000348259 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-204ENST00000348259 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
MRPL55-204ENST00000348259 OVOS2A0A0J9YW53 1432 aa14.04□□□□□ -0.16
MRPL55-204ENST00000348259 OVOS2Q6IE36 1432 aa14.04□□□□□ -0.16
MRPL55-204ENST00000348259 AKAP12Q02952 1782 aa14.04□□□□□ -0.16
MRPL55-204ENST00000348259 MYOM1P52179 1685 aa14.03□□□□□ -0.16
MRPL55-204ENST00000348259 RGPD5Q99666 1765 aa14.02□□□□□ -0.16
MRPL55-204ENST00000348259 QRICH2Q9H0J4 1663 aa14.02□□□□□ -0.16
MRPL55-204ENST00000348259 AATKQ6ZMQ8 1374 aa14.02□□□□□ -0.17
MRPL55-204ENST00000348259 PLSCR1O15162 318 aa14.02□□□□□ -0.17
MRPL55-204ENST00000348259 KCNQ2O43526 872 aa14.02□□□□□ -0.17
MRPL55-204ENST00000348259 GCP02774 474 aa14.02□□□□□ -0.17
MRPL55-204ENST00000348259 YY1P25490 414 aa14.02□□□□□ -0.17
MRPL55-204ENST00000348259 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-204ENST00000348259 USP6P35125 1406 aa14.01□□□□□ -0.17
MRPL55-204ENST00000348259 PPIP5K1Q6PFW1 1433 aa14.01□□□□□ -0.17
MRPL55-204ENST00000348259 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-204ENST00000348259 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
MRPL55-204ENST00000348259 ABTB2Q8N961 1025 aa14.01□□□□□ -0.17
MRPL55-204ENST00000348259 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms