RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 DDX54Q8TDD1 881 aaKnown RBP14.14□□□□□ -0.15
TRAF3-201ENST00000347662 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
TRAF3-201ENST00000347662 DDX58O95786 925 aaKnown RBP14.14□□□□□ -0.15
TRAF3-201ENST00000347662 CENPHQ9H3R5 247 aa14.14□□□□□ -0.15
TRAF3-201ENST00000347662 MAGEC2Q9UBF1 373 aaPredicted RBP14.14□□□□□ -0.15
TRAF3-201ENST00000347662 ERCC4Q92889 916 aaPredicted RBP14.14□□□□□ -0.15
TRAF3-201ENST00000347662 PSMD1Q99460 953 aa14.13□□□□□ -0.15
TRAF3-201ENST00000347662 PHLDB1Q86UU1 1377 aa14.13□□□□□ -0.15
TRAF3-201ENST00000347662 CT47B1P0C2W7 299 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-201ENST00000347662 RIC3Q7Z5B4 369 aa14.13□□□□□ -0.15
TRAF3-201ENST00000347662 TMEM87AQ8NBN3 555 aa14.13□□□□□ -0.15
TRAF3-201ENST00000347662 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
TRAF3-201ENST00000347662 GOLGA6L10A6NI86 522 aa14.12□□□□□ -0.15
TRAF3-201ENST00000347662 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
TRAF3-201ENST00000347662 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
TRAF3-201ENST00000347662 TOM1L2Q6ZVM7 507 aa14.12□□□□□ -0.15
TRAF3-201ENST00000347662 COG6Q9Y2V7 657 aa14.12□□□□□ -0.15
TRAF3-201ENST00000347662 MPHOSPH10O00566 681 aaKnown RBP14.12□□□□□ -0.15
TRAF3-201ENST00000347662 XBP1P17861 261 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 WASHC4Q2M389 1173 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 CHMP5Q9NZZ3 219 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 CHMP4BP1P59074 171 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 CFTRP13569 1480 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 CUX1P39880 1505 aa14.11□□□□□ -0.15
TRAF3-201ENST00000347662 RALYLQ86SE5 291 aaKnown RBP14.11□□□□□ -0.15
TRAF3-201ENST00000347662 SKOR2Q2VWA4 1001 aaPredicted RBP14.1□□□□□ -0.15
TRAF3-201ENST00000347662 RNF20Q5VTR2 975 aa14.1□□□□□ -0.15
TRAF3-201ENST00000347662 CCDC73Q6ZRK6 1079 aa14.1□□□□□ -0.15
TRAF3-201ENST00000347662 MIA2Q96PC5 1412 aa14.1□□□□□ -0.15
TRAF3-201ENST00000347662 ZKSCAN2Q63HK3 967 aa14.1□□□□□ -0.15
TRAF3-201ENST00000347662 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
TRAF3-201ENST00000347662 GOLGA6L7A0A1B0GV03 622 aa14.09□□□□□ -0.15
TRAF3-201ENST00000347662 CCDC112Q8NEF3 446 aa14.09□□□□□ -0.15
TRAF3-201ENST00000347662 PRKRIP1Q9H875 184 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-201ENST00000347662 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-201ENST00000347662 LEKR1Q6ZMV7 388 aa14.09□□□□□ -0.15
TRAF3-201ENST00000347662 NEUROD6Q96NK8 337 aa14.09□□□□□ -0.15
TRAF3-201ENST00000347662 ATP2B1P20020 1258 aa14.09□□□□□ -0.15
TRAF3-201ENST00000347662 E9PSI1 815 aa14.09□□□□□ -0.15
TRAF3-201ENST00000347662 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-201ENST00000347662 MTHFSP49914 203 aa14.08□□□□□ -0.15
TRAF3-201ENST00000347662 LRRC9Q6ZRR7 1453 aa14.08□□□□□ -0.16
TRAF3-201ENST00000347662 SSR1P43307 286 aaKnown RBP14.08□□□□□ -0.16
TRAF3-201ENST00000347662 G3BP1Q13283 466 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAF3-201ENST00000347662 SMC3Q9UQE7 1217 aa14.08□□□□□ -0.16
TRAF3-201ENST00000347662 DDX23Q9BUQ8 820 aaKnown RBP14.08□□□□□ -0.16
TRAF3-201ENST00000347662 SMARCE1Q969G3 411 aa14.08□□□□□ -0.16
TRAF3-201ENST00000347662 NAT10Q9H0A0 1025 aaKnown RBP14.08□□□□□ -0.16
TRAF3-201ENST00000347662 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
TRAF3-201ENST00000347662 PRDM11Q9NQV5 511 aa14.08□□□□□ -0.16
TRAF3-201ENST00000347662 DESP17661 470 aa14.08□□□□□ -0.16
TRAF3-201ENST00000347662 GOLGA6L10A0A0M3HER8 536 aa14.07□□□□□ -0.16
TRAF3-201ENST00000347662 PDE3BQ13370 1112 aa14.07□□□□□ -0.16
TRAF3-201ENST00000347662 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
TRAF3-201ENST00000347662 KIAA0754O94854 1291 aa14.07□□□□□ -0.16
TRAF3-201ENST00000347662 CEP63Q96MT8 703 aa14.07□□□□□ -0.16
TRAF3-201ENST00000347662 SMC2O95347 1197 aa14.07□□□□□ -0.16
TRAF3-201ENST00000347662 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
TRAF3-201ENST00000347662 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
TRAF3-201ENST00000347662 NBPF1Q3BBV0 1214 aa14.06□□□□□ -0.16
TRAF3-201ENST00000347662 TANGO6Q9C0B7 1094 aa14.06□□□□□ -0.16
TRAF3-201ENST00000347662 IPO9Q96P70 1041 aaKnown RBP14.05□□□□□ -0.16
TRAF3-201ENST00000347662 SLC12A5Q9H2X9 1139 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 CEBPAP49715 358 aaPredicted RBP14.05□□□□□ -0.16
TRAF3-201ENST00000347662 ANAPC15P60006 121 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 CCDC181Q5TID7 509 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 FILIP1LQ4L180 1135 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 CABP1Q9NZU7 370 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 DEF6Q9H4E7 631 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 TTC16Q8NEE8 873 aa14.05□□□□□ -0.16
TRAF3-201ENST00000347662 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAF3-201ENST00000347662 FAM193AP78312 1265 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 SDF4Q9BRK5 362 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAF3-201ENST00000347662 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 TXLNAP40222 546 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 KIF21BO75037 1637 aa14.04□□□□□ -0.16
TRAF3-201ENST00000347662 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
TRAF3-201ENST00000347662 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
TRAF3-201ENST00000347662 TRIM21P19474 475 aaKnown RBP14.03□□□□□ -0.16
TRAF3-201ENST00000347662 RRBP1Q9P2E9 1410 aaKnown RBP14.03□□□□□ -0.16
TRAF3-201ENST00000347662 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-201ENST00000347662 COMMD10Q9Y6G5 202 aa14.03□□□□□ -0.16
TRAF3-201ENST00000347662 STAMBPO95630 424 aa14.03□□□□□ -0.16
TRAF3-201ENST00000347662 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-201ENST00000347662 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
TRAF3-201ENST00000347662 CRBNQ96SW2 442 aa14.02□□□□□ -0.16
TRAF3-201ENST00000347662 SLC52A1Q9NWF4 448 aa14.02□□□□□ -0.16
TRAF3-201ENST00000347662 ZNHIT6Q9NWK9 470 aaKnown RBP14.01□□□□□ -0.17
TRAF3-201ENST00000347662 REC8O95072 547 aa14.01□□□□□ -0.17
TRAF3-201ENST00000347662 PLEKHO1Q53GL0 409 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-201ENST00000347662 CCDC91Q7Z6B0 441 aa14.01□□□□□ -0.17
TRAF3-201ENST00000347662 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
TRAF3-201ENST00000347662 SLC3A2P08195 630 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms