RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 CPS1P31327 1500 aa7.15□□□□□ -1.27
VCAM1-202ENST00000347652 NWD1Q149M9 1564 aa7.15□□□□□ -1.27
VCAM1-202ENST00000347652 AMOTL2Q9Y2J4 779 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 TMEM94Q12767 1356 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 ASXL1Q8IXJ9 1541 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 TRPM1Q7Z4N2 1603 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 CFAP70Q5T0N1 1121 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 C14orf93Q9H972 538 aaKnown RBP7.14□□□□□ -1.27
VCAM1-202ENST00000347652 KIAA1210Q9ULL0 1709 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 HOXD11P31277 338 aaPredicted RBP7.14□□□□□ -1.27
VCAM1-202ENST00000347652 DIP2AQ14689 1571 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 PROSER2Q86WR7 435 aaPredicted RBP7.14□□□□□ -1.27
VCAM1-202ENST00000347652 RALGAPBQ86X10 1494 aa7.14□□□□□ -1.27
VCAM1-202ENST00000347652 UBAP1LF5GYI3 381 aa7.13□□□□□ -1.27
VCAM1-202ENST00000347652 XRN1Q8IZH2 1706 aaKnown RBP7.13□□□□□ -1.27
VCAM1-202ENST00000347652 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
VCAM1-202ENST00000347652 FBXO41Q8TF61 875 aa7.13□□□□□ -1.27
VCAM1-202ENST00000347652 STK26Q9P289 416 aa7.13□□□□□ -1.27
VCAM1-202ENST00000347652 STK25O00506 426 aa7.12□□□□□ -1.27
VCAM1-202ENST00000347652 PLCD3Q8N3E9 789 aa7.12□□□□□ -1.27
VCAM1-202ENST00000347652 GPRASP1Q5JY77 1395 aa7.12□□□□□ -1.27
VCAM1-202ENST00000347652 LAMC1P11047 1609 aa7.12□□□□□ -1.27
VCAM1-202ENST00000347652 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
VCAM1-202ENST00000347652 PIP4K2BP78356 416 aa7.12□□□□□ -1.27
VCAM1-202ENST00000347652 ROBO2Q9HCK4 1378 aa7.11□□□□□ -1.27
VCAM1-202ENST00000347652 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
VCAM1-202ENST00000347652 BARGINQ6ZT62 677 aa7.11□□□□□ -1.27
VCAM1-202ENST00000347652 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
VCAM1-202ENST00000347652 NKTRP30414 1462 aaKnown RBP7.11□□□□□ -1.27
VCAM1-202ENST00000347652 ROCK2O75116 1388 aaKnown RBP7.11□□□□□ -1.27
VCAM1-202ENST00000347652 ADGRB1O14514 1584 aa7.11□□□□□ -1.27
VCAM1-202ENST00000347652 SMARCA5O60264 1052 aaPredicted RBP7.11□□□□□ -1.27
VCAM1-202ENST00000347652 PIK3R4Q99570 1358 aa7.11□□□□□ -1.27
VCAM1-202ENST00000347652 TESPA1A2RU30 521 aaPredicted RBP7.1□□□□□ -1.27
VCAM1-202ENST00000347652 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.1□□□□□ -1.27
VCAM1-202ENST00000347652 PLEKHH1Q9ULM0 1364 aa7.1□□□□□ -1.27
VCAM1-202ENST00000347652 IQSEC2Q5JU85 1478 aa7.1□□□□□ -1.27
VCAM1-202ENST00000347652 NEFLP07196 543 aa7.1□□□□□ -1.27
VCAM1-202ENST00000347652 WAPLQ7Z5K2 1190 aa7.1□□□□□ -1.27
VCAM1-202ENST00000347652 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
VCAM1-202ENST00000347652 NALCNQ8IZF0 1738 aa7.09□□□□□ -1.27
VCAM1-202ENST00000347652 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.09□□□□□ -1.27
VCAM1-202ENST00000347652 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
VCAM1-202ENST00000347652 SAFB2Q14151 953 aaKnown RBP eCLIP7.09□□□□□ -1.28
VCAM1-202ENST00000347652 CCDC125Q86Z20 511 aa7.09□□□□□ -1.28
VCAM1-202ENST00000347652 PRDM16Q9HAZ2 1276 aa7.09□□□□□ -1.28
VCAM1-202ENST00000347652 PDE4DQ08499 809 aa7.08□□□□□ -1.28
VCAM1-202ENST00000347652 TRAK1Q9UPV9 953 aa7.08□□□□□ -1.28
VCAM1-202ENST00000347652 LRPPRCP42704 1394 aaKnown RBP7.07□□□□□ -1.28
VCAM1-202ENST00000347652 TOM1O60784 492 aa7.07□□□□□ -1.28
VCAM1-202ENST00000347652 BCCIPQ9P287 314 aaKnown RBP eCLIP7.07□□□□□ -1.28
VCAM1-202ENST00000347652 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
VCAM1-202ENST00000347652 MSH6P52701 1360 aa7.07□□□□□ -1.28
VCAM1-202ENST00000347652 ABCC11Q96J66 1382 aa7.07□□□□□ -1.28
VCAM1-202ENST00000347652 USP47Q96K76 1375 aa7.07□□□□□ -1.28
VCAM1-202ENST00000347652 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
VCAM1-202ENST00000347652 TICAM2Q86XR7 235 aa7.07□□□□□ -1.28
VCAM1-202ENST00000347652 NUTM2FA1L443 756 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 HSPA5P11021 654 aaKnown RBP7.06□□□□□ -1.28
VCAM1-202ENST00000347652 KNDC1Q76NI1 1749 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 DLC1Q96QB1 1528 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 TECPR2O15040 1411 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 HSPA1LP34931 641 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 CCDC27Q2M243 656 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 SIRT1Q96EB6 747 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 AK7Q96M32 723 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 PRAM1Q96QH2 718 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 C19orf44Q9H6X5 657 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 ROBO1Q9Y6N7 1651 aa7.06□□□□□ -1.28
VCAM1-202ENST00000347652 ADGRL3Q9HAR2 1447 aa7.05□□□□□ -1.28
VCAM1-202ENST00000347652 A6NJR5 290 aa7.05□□□□□ -1.28
VCAM1-202ENST00000347652 PSMD1Q99460 953 aa7.05□□□□□ -1.28
VCAM1-202ENST00000347652 SLAIN2Q9P270 581 aa7.05□□□□□ -1.28
VCAM1-202ENST00000347652 DDX17Q92841 729 aaKnown RBP7.05□□□□□ -1.28
VCAM1-202ENST00000347652 HIRIP3Q9BW71 556 aaPredicted RBP7.05□□□□□ -1.28
VCAM1-202ENST00000347652 ARHGEF28Q8N1W1 1705 aaKnown RBP7.05□□□□□ -1.28
VCAM1-202ENST00000347652 EIF3AQ14152 1382 aaKnown RBP7.05□□□□□ -1.28
VCAM1-202ENST00000347652 ST20-MTHFSA0A0A6YYL1 179 aa7.05□□□□□ -1.28
VCAM1-202ENST00000347652 TRIM66O15016 1216 aa7.05□□□□□ -1.28
VCAM1-202ENST00000347652 MST1RQ04912 1400 aa7.04□□□□□ -1.28
VCAM1-202ENST00000347652 ATF3P18847 181 aa7.04□□□□□ -1.28
VCAM1-202ENST00000347652 FLIIQ13045 1269 aa7.04□□□□□ -1.28
VCAM1-202ENST00000347652 FAM135BQ49AJ0 1406 aa7.04□□□□□ -1.28
VCAM1-202ENST00000347652 NCOA3Q9Y6Q9 1424 aa7.04□□□□□ -1.28
VCAM1-202ENST00000347652 RBM26Q5T8P6 1007 aaKnown RBP7.03□□□□□ -1.28
VCAM1-202ENST00000347652 CCDC97Q96F63 343 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-202ENST00000347652 TESK2Q96S53 571 aa7.03□□□□□ -1.28
VCAM1-202ENST00000347652 ORAI2Q96SN7 254 aa7.03□□□□□ -1.28
VCAM1-202ENST00000347652 ARIH1Q9Y4X5 557 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-202ENST00000347652 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-202ENST00000347652 CENPJQ9HC77 1338 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-202ENST00000347652 BRINP3Q76B58 766 aa7.03□□□□□ -1.28
VCAM1-202ENST00000347652 MIER1Q8N108 512 aa7.03□□□□□ -1.28
VCAM1-202ENST00000347652 RGPD8O14715 1765 aaPredicted RBP7.03□□□□□ -1.28
VCAM1-202ENST00000347652 FGD1P98174 961 aa7.02□□□□□ -1.29
VCAM1-202ENST00000347652 IGSF5Q9NSI5 407 aa7.02□□□□□ -1.29
VCAM1-202ENST00000347652 POGKQ9P215 609 aa7.02□□□□□ -1.29
VCAM1-202ENST00000347652 QRICH2Q9H0J4 1663 aa7.02□□□□□ -1.29
VCAM1-202ENST00000347652 C1orf167Q5SNV9 1468 aa7.02□□□□□ -1.29
VCAM1-202ENST00000347652 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms