RNA–Protein interactions for RNA: ENST00000342404.7

CCDC83-202, Transcript of coiled-coil domain containing 83, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC83, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-202ENST00000342404 MYBBP1AQ9BQG0 1328 aaKnown RBP11.73□□□□□ -0.53
CCDC83-202ENST00000342404 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
CCDC83-202ENST00000342404 FYB1O15117 783 aa11.72□□□□□ -0.53
CCDC83-202ENST00000342404 PSME1Q06323 249 aa11.72□□□□□ -0.53
CCDC83-202ENST00000342404 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
CCDC83-202ENST00000342404 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
CCDC83-202ENST00000342404 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
CCDC83-202ENST00000342404 ADRA2BP18089 450 aa11.72□□□□□ -0.53
CCDC83-202ENST00000342404 DDX17Q92841 729 aaKnown RBP11.72□□□□□ -0.53
CCDC83-202ENST00000342404 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.53
CCDC83-202ENST00000342404 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
CCDC83-202ENST00000342404 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
CCDC83-202ENST00000342404 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
CCDC83-202ENST00000342404 NPC1L1Q9UHC9 1359 aa11.71□□□□□ -0.54
CCDC83-202ENST00000342404 SOX12O15370 315 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 LMOD2Q6P5Q4 547 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 TTC21BQ7Z4L5 1316 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 NSD2O96028 1365 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
CCDC83-202ENST00000342404 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
CCDC83-202ENST00000342404 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
CCDC83-202ENST00000342404 COG3Q96JB2 828 aa11.69□□□□□ -0.54
CCDC83-202ENST00000342404 FBLN1P23142 703 aa11.68□□□□□ -0.54
CCDC83-202ENST00000342404 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
CCDC83-202ENST00000342404 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
CCDC83-202ENST00000342404 BRINP3Q76B58 766 aa11.68□□□□□ -0.54
CCDC83-202ENST00000342404 FAM9BQ8IZU0 186 aa11.68□□□□□ -0.54
CCDC83-202ENST00000342404 ANKRD26Q9UPS8 1709 aa11.68□□□□□ -0.54
CCDC83-202ENST00000342404 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
CCDC83-202ENST00000342404 NLRP6P59044 892 aa11.67□□□□□ -0.54
CCDC83-202ENST00000342404 TTC21AQ8NDW8 1320 aa11.66□□□□□ -0.54
CCDC83-202ENST00000342404 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
CCDC83-202ENST00000342404 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
CCDC83-202ENST00000342404 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
CCDC83-202ENST00000342404 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
CCDC83-202ENST00000342404 NPHP3Q7Z494 1330 aa11.65□□□□□ -0.54
CCDC83-202ENST00000342404 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.54
CCDC83-202ENST00000342404 PIP4K2BP78356 416 aa11.65□□□□□ -0.55
CCDC83-202ENST00000342404 MTHFSP49914 203 aa11.64□□□□□ -0.55
CCDC83-202ENST00000342404 RRS1Q15050 365 aaKnown RBP11.64□□□□□ -0.55
CCDC83-202ENST00000342404 MAP2P11137 1827 aaKnown RBP11.64□□□□□ -0.55
CCDC83-202ENST00000342404 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
CCDC83-202ENST00000342404 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
CCDC83-202ENST00000342404 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
CCDC83-202ENST00000342404 ROBO1Q9Y6N7 1651 aa11.62□□□□□ -0.55
CCDC83-202ENST00000342404 SENP3-EIF4A1A0A087X0R7 540 aa11.61□□□□□ -0.55
CCDC83-202ENST00000342404 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
CCDC83-202ENST00000342404 UBAP1LF5GYI3 381 aa11.61□□□□□ -0.55
CCDC83-202ENST00000342404 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
CCDC83-202ENST00000342404 TOM1O60784 492 aa11.61□□□□□ -0.55
CCDC83-202ENST00000342404 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC83-202ENST00000342404 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
CCDC83-202ENST00000342404 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
CCDC83-202ENST00000342404 PXDNQ92626 1479 aa11.6□□□□□ -0.55
CCDC83-202ENST00000342404 POLKQ9UBT6 870 aa11.59□□□□□ -0.55
CCDC83-202ENST00000342404 MARF1Q9Y4F3 1742 aaKnown RBP11.59□□□□□ -0.55
CCDC83-202ENST00000342404 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
CCDC83-202ENST00000342404 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
CCDC83-202ENST00000342404 USP31Q70CQ4 1352 aa11.58□□□□□ -0.56
CCDC83-202ENST00000342404 POTEHQ6S545 545 aa11.58□□□□□ -0.56
CCDC83-202ENST00000342404 CABLES1Q8TDN4 633 aa11.58□□□□□ -0.56
CCDC83-202ENST00000342404 ALS2Q96Q42 1657 aa11.58□□□□□ -0.56
CCDC83-202ENST00000342404 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
CCDC83-202ENST00000342404 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
CCDC83-202ENST00000342404 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
CCDC83-202ENST00000342404 SBNO1A3KN83 1393 aa11.57□□□□□ -0.56
CCDC83-202ENST00000342404 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
CCDC83-202ENST00000342404 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
CCDC83-202ENST00000342404 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
CCDC83-202ENST00000342404 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC83-202ENST00000342404 MAP3K19Q56UN5 1328 aa11.57□□□□□ -0.56
CCDC83-202ENST00000342404 AMPHP49418 695 aa11.56□□□□□ -0.56
CCDC83-202ENST00000342404 LTN1O94822 1766 aa11.56□□□□□ -0.56
CCDC83-202ENST00000342404 GCP02774 474 aa11.56□□□□□ -0.56
CCDC83-202ENST00000342404 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
CCDC83-202ENST00000342404 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
CCDC83-202ENST00000342404 ARHGEF10O15013 1369 aa11.55□□□□□ -0.56
CCDC83-202ENST00000342404 ZC3H6P61129 1189 aaKnown RBP11.55□□□□□ -0.56
CCDC83-202ENST00000342404 KCNH5Q8NCM2 988 aa11.55□□□□□ -0.56
CCDC83-202ENST00000342404 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
CCDC83-202ENST00000342404 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
CCDC83-202ENST00000342404 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
CCDC83-202ENST00000342404 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC83-202ENST00000342404 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
CCDC83-202ENST00000342404 CDK12Q9NYV4 1490 aaPredicted RBP11.54□□□□□ -0.56
CCDC83-202ENST00000342404 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
CCDC83-202ENST00000342404 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
CCDC83-202ENST00000342404 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
CCDC83-202ENST00000342404 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
CCDC83-202ENST00000342404 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
CCDC83-202ENST00000342404 LTV1Q96GA3 475 aaPredicted RBP11.53□□□□□ -0.56
CCDC83-202ENST00000342404 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
CCDC83-202ENST00000342404 USP19O94966 1318 aa11.53□□□□□ -0.56
CCDC83-202ENST00000342404 FLT4P35916 1363 aa11.53□□□□□ -0.56
CCDC83-202ENST00000342404 SMG6Q86US8 1419 aaKnown RBP11.53□□□□□ -0.56
CCDC83-202ENST00000342404 NFAT5O94916 1531 aa11.53□□□□□ -0.56
CCDC83-202ENST00000342404 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
CCDC83-202ENST00000342404 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms