RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 PSME1Q06323 249 aa26.22■■□□□ 1.79
GTF3C5-201ENST00000342018 CCDC184Q52MB2 194 aa26.21■■□□□ 1.79
GTF3C5-201ENST00000342018 NSD2O96028 1365 aa26.21■■□□□ 1.79
GTF3C5-201ENST00000342018 PAK3O75914 559 aaPredicted RBP26.2■■□□□ 1.79
GTF3C5-201ENST00000342018 XPCQ01831 940 aaPredicted RBP26.2■■□□□ 1.79
GTF3C5-201ENST00000342018 SLAIN2Q9P270 581 aa26.2■■□□□ 1.79
GTF3C5-201ENST00000342018 KIF20BQ96Q89 1820 aa26.2■■□□□ 1.78
GTF3C5-201ENST00000342018 ZRANB1Q9UGI0 708 aa26.2■■□□□ 1.78
GTF3C5-201ENST00000342018 NRKQ7Z2Y5 1582 aa26.18■■□□□ 1.78
GTF3C5-201ENST00000342018 MRS2Q9HD23 443 aa26.18■■□□□ 1.78
GTF3C5-201ENST00000342018 DDX17Q92841 729 aaKnown RBP26.17■■□□□ 1.78
GTF3C5-201ENST00000342018 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
GTF3C5-201ENST00000342018 KIF1AQ12756 1690 aa26.16■■□□□ 1.78
GTF3C5-201ENST00000342018 SSH2Q76I76 1423 aa26.16■■□□□ 1.78
GTF3C5-201ENST00000342018 NLRP13Q86W25 1043 aa26.14■■□□□ 1.78
GTF3C5-201ENST00000342018 BRINP3Q76B58 766 aa26.14■■□□□ 1.77
GTF3C5-201ENST00000342018 COG3Q96JB2 828 aa26.14■■□□□ 1.77
GTF3C5-201ENST00000342018 TTC21AQ8NDW8 1320 aa26.13■■□□□ 1.77
GTF3C5-201ENST00000342018 NUTM2GQ5VZR2 741 aa26.12■■□□□ 1.77
GTF3C5-201ENST00000342018 KRT28Q7Z3Y7 464 aa26.12■■□□□ 1.77
GTF3C5-201ENST00000342018 ANKRD26Q9UPS8 1709 aa26.12■■□□□ 1.77
GTF3C5-201ENST00000342018 ABTB2Q8N961 1025 aa26.11■■□□□ 1.77
GTF3C5-201ENST00000342018 LMOD2Q6P5Q4 547 aa26.09■■□□□ 1.77
GTF3C5-201ENST00000342018 FBLN1P23142 703 aa26.08■■□□□ 1.77
GTF3C5-201ENST00000342018 NPHP3Q7Z494 1330 aa26.08■■□□□ 1.77
GTF3C5-201ENST00000342018 BRD4O60885 1362 aaPredicted RBP26.08■■□□□ 1.77
GTF3C5-201ENST00000342018 NLRP6P59044 892 aa26.08■■□□□ 1.76
GTF3C5-201ENST00000342018 PIK3C2AO00443 1686 aa26.07■■□□□ 1.76
GTF3C5-201ENST00000342018 SOX12O15370 315 aa26.06■■□□□ 1.76
GTF3C5-201ENST00000342018 PLEKHG5O94827 1062 aa26.06■■□□□ 1.76
GTF3C5-201ENST00000342018 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
GTF3C5-201ENST00000342018 MTHFSP49914 203 aa26.04■■□□□ 1.76
GTF3C5-201ENST00000342018 FAM9BQ8IZU0 186 aa26.04■■□□□ 1.76
GTF3C5-201ENST00000342018 OVOS2A0A0J9YW53 1432 aa26.03■■□□□ 1.76
GTF3C5-201ENST00000342018 OVOS2Q6IE36 1432 aa26.03■■□□□ 1.76
GTF3C5-201ENST00000342018 PPM1GO15355 546 aaPredicted RBP26.01■■□□□ 1.75
GTF3C5-201ENST00000342018 TRPM3Q9HCF6 1732 aaPredicted RBP26.01■■□□□ 1.75
GTF3C5-201ENST00000342018 USP31Q70CQ4 1352 aa26■■□□□ 1.75
GTF3C5-201ENST00000342018 TOM1O60784 492 aa25.99■■□□□ 1.75
GTF3C5-201ENST00000342018 PIP4K2BP78356 416 aa25.99■■□□□ 1.75
GTF3C5-201ENST00000342018 RRS1Q15050 365 aaKnown RBP25.99■■□□□ 1.75
GTF3C5-201ENST00000342018 PXDNQ92626 1479 aa25.99■■□□□ 1.75
GTF3C5-201ENST00000342018 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
GTF3C5-201ENST00000342018 UBAP1LF5GYI3 381 aa25.98■■□□□ 1.75
GTF3C5-201ENST00000342018 ROBO1Q9Y6N7 1651 aa25.97■■□□□ 1.75
GTF3C5-201ENST00000342018 CERKQ8TCT0 537 aa25.96■■□□□ 1.75
GTF3C5-201ENST00000342018 PNISRQ8TF01 805 aaKnown RBP25.96■■□□□ 1.75
GTF3C5-201ENST00000342018 POLKQ9UBT6 870 aa25.96■■□□□ 1.75
GTF3C5-201ENST00000342018 EMILIN1Q9Y6C2 1016 aa25.96■■□□□ 1.75
GTF3C5-201ENST00000342018 SBNO1A3KN83 1393 aa25.95■■□□□ 1.75
GTF3C5-201ENST00000342018 MAP2P11137 1827 aaKnown RBP25.95■■□□□ 1.74
GTF3C5-201ENST00000342018 CFAP53Q96M91 514 aa25.94■■□□□ 1.74
GTF3C5-201ENST00000342018 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
GTF3C5-201ENST00000342018 AATKQ6ZMQ8 1374 aa25.94■■□□□ 1.74
GTF3C5-201ENST00000342018 SOS2Q07890 1332 aaPredicted RBP25.93■■□□□ 1.74
GTF3C5-201ENST00000342018 TNS3Q68CZ2 1445 aa25.93■■□□□ 1.74
GTF3C5-201ENST00000342018 SPATA31A3Q5VYP0 1347 aa25.93■■□□□ 1.74
GTF3C5-201ENST00000342018 ALS2Q96Q42 1657 aa25.92■■□□□ 1.74
GTF3C5-201ENST00000342018 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
GTF3C5-201ENST00000342018 USP54Q70EL1 1684 aa25.9■■□□□ 1.74
GTF3C5-201ENST00000342018 WDR43Q15061 677 aaKnown RBP eCLIP25.9■■□□□ 1.74
GTF3C5-201ENST00000342018 ZBTB7CA1YPR0 619 aa25.88■■□□□ 1.73
GTF3C5-201ENST00000342018 IQSEC2Q5JU85 1478 aa25.88■■□□□ 1.73
GTF3C5-201ENST00000342018 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
GTF3C5-201ENST00000342018 CABLES1Q8TDN4 633 aa25.87■■□□□ 1.73
GTF3C5-201ENST00000342018 ARHGEF10O15013 1369 aa25.87■■□□□ 1.73
GTF3C5-201ENST00000342018 KCNH5Q8NCM2 988 aa25.86■■□□□ 1.73
GTF3C5-201ENST00000342018 GCP02774 474 aa25.86■■□□□ 1.73
GTF3C5-201ENST00000342018 AMPHP49418 695 aa25.85■■□□□ 1.73
GTF3C5-201ENST00000342018 USP19O94966 1318 aa25.85■■□□□ 1.73
GTF3C5-201ENST00000342018 ADAMTS8Q9UP79 889 aa25.84■■□□□ 1.73
GTF3C5-201ENST00000342018 SMG6Q86US8 1419 aaKnown RBP25.84■■□□□ 1.73
GTF3C5-201ENST00000342018 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
GTF3C5-201ENST00000342018 DIAPH1O60610 1272 aaKnown RBP25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 AHDC1Q5TGY3 1603 aaPredicted RBP25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 CDK12Q9NYV4 1490 aaPredicted RBP25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 PNPLA6Q8IY17 1366 aa25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 SLIT3O75094 1523 aa25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 NFAT5O94916 1531 aa25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 COL3A1P02461 1466 aaPredicted RBP25.82■■□□□ 1.72
GTF3C5-201ENST00000342018 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
GTF3C5-201ENST00000342018 PEAK1Q9H792 1746 aa25.81■■□□□ 1.72
GTF3C5-201ENST00000342018 ZC3H6P61129 1189 aaKnown RBP25.8■■□□□ 1.72
GTF3C5-201ENST00000342018 HSP90AB2PQ58FF8 381 aa25.8■■□□□ 1.72
GTF3C5-201ENST00000342018 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
GTF3C5-201ENST00000342018 SHPRHQ149N8 1683 aa25.8■■□□□ 1.72
GTF3C5-201ENST00000342018 NUDCQ9Y266 331 aa25.8■■□□□ 1.72
GTF3C5-201ENST00000342018 HNRNPUQ00839 825 aaKnown RBP eCLIP25.79■■□□□ 1.72
GTF3C5-201ENST00000342018 PHLPP1O60346 1717 aa25.79■■□□□ 1.72
GTF3C5-201ENST00000342018 HAP1P54257 671 aaPredicted RBP25.78■■□□□ 1.72
GTF3C5-201ENST00000342018 U2AF1L5P0DN76 240 aaPredicted RBP25.78■■□□□ 1.72
GTF3C5-201ENST00000342018 U2AF1Q01081 240 aaKnown RBP eCLIP25.78■■□□□ 1.72
GTF3C5-201ENST00000342018 LTN1O94822 1766 aa25.78■■□□□ 1.72
GTF3C5-201ENST00000342018 INSRP06213 1382 aa25.78■■□□□ 1.72
GTF3C5-201ENST00000342018 FLT4P35916 1363 aa25.78■■□□□ 1.72
GTF3C5-201ENST00000342018 PHRF1Q9P1Y6 1649 aaKnown RBP25.77■■□□□ 1.72
GTF3C5-201ENST00000342018 HOXC9P31274 260 aa25.76■■□□□ 1.72
GTF3C5-201ENST00000342018 ARHGEF25Q86VW2 580 aa25.75■■□□□ 1.71
GTF3C5-201ENST00000342018 CCDC146Q8IYE0 955 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms