RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 ZKSCAN2Q63HK3 967 aa11.35□□□□□ -0.59
FOXR2-201ENST00000339140 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
FOXR2-201ENST00000339140 KIF1BO60333 1816 aa11.35□□□□□ -0.59
FOXR2-201ENST00000339140 RBM25P49756 843 aaKnown RBP11.35□□□□□ -0.59
FOXR2-201ENST00000339140 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
FOXR2-201ENST00000339140 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
FOXR2-201ENST00000339140 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
FOXR2-201ENST00000339140 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
FOXR2-201ENST00000339140 MYO3AQ8NEV4 1616 aa11.34□□□□□ -0.59
FOXR2-201ENST00000339140 DDIT3P35638 169 aa11.34□□□□□ -0.59
FOXR2-201ENST00000339140 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
FOXR2-201ENST00000339140 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
FOXR2-201ENST00000339140 PDCL3Q9H2J4 239 aa11.34□□□□□ -0.59
FOXR2-201ENST00000339140 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
FOXR2-201ENST00000339140 TCP11L2Q8N4U5 519 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 CFAP53Q96M91 514 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 NOS1P29475 1434 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 MYOM2P54296 1465 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 PREX1Q8TCU6 1659 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 GOLGA6L22H0YM25 854 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 TERF1P54274 439 aa11.33□□□□□ -0.6
FOXR2-201ENST00000339140 RAB3GAP1Q15042 981 aa11.32□□□□□ -0.6
FOXR2-201ENST00000339140 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
FOXR2-201ENST00000339140 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
FOXR2-201ENST00000339140 USP32Q8NFA0 1604 aa11.32□□□□□ -0.6
FOXR2-201ENST00000339140 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
FOXR2-201ENST00000339140 MORC1Q86VD1 984 aa11.31□□□□□ -0.6
FOXR2-201ENST00000339140 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
FOXR2-201ENST00000339140 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
FOXR2-201ENST00000339140 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
FOXR2-201ENST00000339140 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
FOXR2-201ENST00000339140 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
FOXR2-201ENST00000339140 NEUROD2Q15784 382 aa11.3□□□□□ -0.6
FOXR2-201ENST00000339140 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
FOXR2-201ENST00000339140 PPP1R9BQ96SB3 815 aa11.3□□□□□ -0.6
FOXR2-201ENST00000339140 ZSCAN30Q86W11 494 aa11.29□□□□□ -0.6
FOXR2-201ENST00000339140 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
FOXR2-201ENST00000339140 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
FOXR2-201ENST00000339140 UGGT1Q9NYU2 1555 aa11.29□□□□□ -0.6
FOXR2-201ENST00000339140 NSD3Q9BZ95 1437 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 ADGRB2O60241 1585 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 MLECQ14165 292 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 HS1BP3Q53T59 392 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 TNNQ9UQP3 1299 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
FOXR2-201ENST00000339140 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
FOXR2-201ENST00000339140 MSNP26038 577 aaKnown RBP11.27□□□□□ -0.6
FOXR2-201ENST00000339140 NASPP49321 788 aaPredicted RBP11.27□□□□□ -0.6
FOXR2-201ENST00000339140 PLPPR3Q6T4P5 718 aa11.27□□□□□ -0.6
FOXR2-201ENST00000339140 SPATA31D1Q6ZQQ2 1576 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 NSD2O96028 1365 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 ADGRB3O60242 1522 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 IPO8O15397 1037 aaKnown RBP11.27□□□□□ -0.61
FOXR2-201ENST00000339140 OFD1O75665 1012 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 CFAP44Q96MT7 982 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 CHMP4BQ9H444 224 aaKnown RBP11.27□□□□□ -0.61
FOXR2-201ENST00000339140 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 SETBP1Q9Y6X0 1596 aa11.27□□□□□ -0.61
FOXR2-201ENST00000339140 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 BMP2KLQ5H9B9 411 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 ITPRIPQ8IWB1 547 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 SLC52A1Q9NWF4 448 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 ABCC11Q96J66 1382 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
FOXR2-201ENST00000339140 K7ELQ4 463 aaPredicted RBP11.25□□□□□ -0.61
FOXR2-201ENST00000339140 NUCB1Q02818 461 aa11.25□□□□□ -0.61
FOXR2-201ENST00000339140 ESF1Q9H501 851 aaKnown RBP11.25□□□□□ -0.61
FOXR2-201ENST00000339140 IL16Q14005 1332 aa11.25□□□□□ -0.61
FOXR2-201ENST00000339140 TRIM27P14373 513 aa11.25□□□□□ -0.61
FOXR2-201ENST00000339140 PPLO60437 1756 aa11.24□□□□□ -0.61
FOXR2-201ENST00000339140 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
FOXR2-201ENST00000339140 MTERF4Q7Z6M4 381 aaKnown RBP11.24□□□□□ -0.61
FOXR2-201ENST00000339140 MYO5BQ9ULV0 1848 aa11.24□□□□□ -0.61
FOXR2-201ENST00000339140 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
FOXR2-201ENST00000339140 MTHFSP49914 203 aa11.23□□□□□ -0.61
FOXR2-201ENST00000339140 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
FOXR2-201ENST00000339140 PUS7Q96PZ0 661 aaKnown RBP11.23□□□□□ -0.61
FOXR2-201ENST00000339140 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
FOXR2-201ENST00000339140 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
FOXR2-201ENST00000339140 IDI1Q13907 227 aa11.23□□□□□ -0.61
FOXR2-201ENST00000339140 FBXO31Q5XUX0 539 aaPredicted RBP11.23□□□□□ -0.61
FOXR2-201ENST00000339140 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
FOXR2-201ENST00000339140 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
FOXR2-201ENST00000339140 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
FOXR2-201ENST00000339140 ZNF445P59923 1031 aa11.22□□□□□ -0.61
FOXR2-201ENST00000339140 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
FOXR2-201ENST00000339140 ZNF428Q96B54 188 aa11.22□□□□□ -0.61
FOXR2-201ENST00000339140 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
FOXR2-201ENST00000339140 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
FOXR2-201ENST00000339140 C3P01024 1663 aa11.22□□□□□ -0.61
FOXR2-201ENST00000339140 NUCB2P80303 420 aa11.21□□□□□ -0.61
FOXR2-201ENST00000339140 QRICH2Q9H0J4 1663 aa11.21□□□□□ -0.61
FOXR2-201ENST00000339140 MCM5P33992 734 aa11.21□□□□□ -0.62
FOXR2-201ENST00000339140 CSPP1Q1MSJ5 1256 aa11.21□□□□□ -0.62
FOXR2-201ENST00000339140 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms