RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 PLEKHD1A6NEE1 506 aa8.42□□□□□ -1.06
CAST-203ENST00000338252 ZNF335Q9H4Z2 1342 aaPredicted RBP8.42□□□□□ -1.06
CAST-203ENST00000338252 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
CAST-203ENST00000338252 PIP4K2BP78356 416 aa8.42□□□□□ -1.06
CAST-203ENST00000338252 FTSJ3Q8IY81 847 aaKnown RBP8.42□□□□□ -1.06
CAST-203ENST00000338252 PLCD3Q8N3E9 789 aa8.42□□□□□ -1.06
CAST-203ENST00000338252 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
CAST-203ENST00000338252 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
CAST-203ENST00000338252 PRIMPOLQ96LW4 560 aa8.41□□□□□ -1.06
CAST-203ENST00000338252 SENP3Q9H4L4 574 aaPredicted RBP8.41□□□□□ -1.06
CAST-203ENST00000338252 CCDC39Q9UFE4 941 aa8.41□□□□□ -1.06
CAST-203ENST00000338252 FAM135AQ9P2D6 1515 aa8.41□□□□□ -1.06
CAST-203ENST00000338252 HMGN5P82970 282 aaKnown RBP8.41□□□□□ -1.06
CAST-203ENST00000338252 DDX49Q9Y6V7 483 aaKnown RBP8.41□□□□□ -1.06
CAST-203ENST00000338252 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
CAST-203ENST00000338252 ATP10AO60312 1499 aa8.41□□□□□ -1.06
CAST-203ENST00000338252 E9PSI1 815 aa8.4□□□□□ -1.06
CAST-203ENST00000338252 SLC20A2Q08357 652 aa8.4□□□□□ -1.06
CAST-203ENST00000338252 TSC1Q92574 1164 aa8.4□□□□□ -1.06
CAST-203ENST00000338252 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.07
CAST-203ENST00000338252 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.07
CAST-203ENST00000338252 CGNQ9P2M7 1197 aaKnown RBP8.4□□□□□ -1.07
CAST-203ENST00000338252 GOLGA6L22H0YM25 854 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 SSFA2P28290 1259 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 PKD2Q13563 968 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 C9orf84Q5VXU9 1444 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 TOM1O60784 492 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 PPP2R1AP30153 589 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 PRIM1P49642 420 aaKnown RBP8.39□□□□□ -1.07
CAST-203ENST00000338252 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
CAST-203ENST00000338252 KIF2CQ99661 725 aa8.39□□□□□ -1.07
CAST-203ENST00000338252 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 KDM5DQ9BY66 1539 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 LAMC1P11047 1609 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 NBPF1Q3BBV0 1214 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 TESK2Q96S53 571 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
CAST-203ENST00000338252 TRAPPC8Q9Y2L5 1435 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
CAST-203ENST00000338252 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
CAST-203ENST00000338252 GPRASP1Q5JY77 1395 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 CFAP74Q9C0B2 1584 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 ADGBQ8N7X0 1667 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 RLBP1P12271 317 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 CAVIN1Q6NZI2 390 aaKnown RBP8.37□□□□□ -1.07
CAST-203ENST00000338252 LMBRD1Q9NUN5 540 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 PIK3C2GO75747 1445 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 PRDM15P57071 1507 aaPredicted RBP8.37□□□□□ -1.07
CAST-203ENST00000338252 CHRM1P11229 460 aaPredicted RBP8.37□□□□□ -1.07
CAST-203ENST00000338252 BCL2L12Q9HB09 334 aa8.37□□□□□ -1.07
CAST-203ENST00000338252 ANKRD7Q92527 254 aa8.36□□□□□ -1.07
CAST-203ENST00000338252 KIF3AQ9Y496 699 aa8.36□□□□□ -1.07
CAST-203ENST00000338252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.36□□□□□ -1.07
CAST-203ENST00000338252 PRAG1Q86YV5 1406 aa8.36□□□□□ -1.07
CAST-203ENST00000338252 IGSF3O75054 1194 aa8.36□□□□□ -1.07
CAST-203ENST00000338252 CDK11BP21127 795 aaKnown RBP8.36□□□□□ -1.07
CAST-203ENST00000338252 DNTTIP2Q5QJE6 756 aaKnown RBP8.36□□□□□ -1.07
CAST-203ENST00000338252 PDCL2Q8N4E4 241 aa8.36□□□□□ -1.07
CAST-203ENST00000338252 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
CAST-203ENST00000338252 LRSAM1Q6UWE0 723 aa8.35□□□□□ -1.07
CAST-203ENST00000338252 PIBF1Q8WXW3 757 aa8.35□□□□□ -1.07
CAST-203ENST00000338252 ADGRL2O95490 1459 aa8.35□□□□□ -1.07
CAST-203ENST00000338252 APAF1O14727 1248 aa8.35□□□□□ -1.07
CAST-203ENST00000338252 CYP2E1P05181 493 aaPredicted RBP8.35□□□□□ -1.07
CAST-203ENST00000338252 CCDC146Q8IYE0 955 aa8.35□□□□□ -1.07
CAST-203ENST00000338252 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
CAST-203ENST00000338252 NPM3O75607 178 aaKnown RBP8.34□□□□□ -1.07
CAST-203ENST00000338252 RARSP54136 660 aaKnown RBP8.34□□□□□ -1.07
CAST-203ENST00000338252 TEX2Q8IWB9 1127 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 FEZ1Q99689 392 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 TNNQ9UQP3 1299 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 ZNF644Q9H582 1327 aaPredicted RBP8.34□□□□□ -1.07
CAST-203ENST00000338252 CDK13Q14004 1512 aaKnown RBP8.34□□□□□ -1.07
CAST-203ENST00000338252 FAM177BA6PVY3 158 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.075e-13■■■□□ 18.9
CAST-203ENST00000338252 GPT2Q8TD30 523 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 FOXD4L1Q9NU39 408 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 CAMSAP1Q5T5Y3 1602 aa8.34□□□□□ -1.07
CAST-203ENST00000338252 GABPB1Q06547 395 aaPredicted RBP8.34□□□□□ -1.08
CAST-203ENST00000338252 FKBP5Q13451 457 aaPredicted RBP8.34□□□□□ -1.08
CAST-203ENST00000338252 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.08
CAST-203ENST00000338252 ZNF771Q7L3S4 317 aaPredicted RBP8.34□□□□□ -1.08
CAST-203ENST00000338252 NGEFQ8N5V2 710 aa8.34□□□□□ -1.08
CAST-203ENST00000338252 ZFP91Q96JP5 570 aaPredicted RBP8.34□□□□□ -1.08
CAST-203ENST00000338252 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.08
CAST-203ENST00000338252 SPTLC3Q9NUV7 552 aa8.34□□□□□ -1.08
CAST-203ENST00000338252 NPC1L1Q9UHC9 1359 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 RAPGEF6Q8TEU7 1601 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 SLFN14P0C7P3 912 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 MCTP1Q6DN14 999 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 OGFRQ9NZT2 677 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAST-203ENST00000338252 NUP153P49790 1475 aaKnown RBP8.33□□□□□ -1.08
CAST-203ENST00000338252 TULP2O00295 520 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 EFCAB2Q5VUJ9 269 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 PPP6R1Q9UPN7 881 aa8.33□□□□□ -1.08
CAST-203ENST00000338252 CROCC2H7BZ55 1655 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms