RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CTR9Q6PD62 1173 aa6.4□□□□□ -1.39
SDR42E1-201ENST00000328945 COG3Q96JB2 828 aa6.4□□□□□ -1.39
SDR42E1-201ENST00000328945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.4□□□□□ -1.39
SDR42E1-201ENST00000328945 JPH4Q96JJ6 628 aa6.4□□□□□ -1.39
SDR42E1-201ENST00000328945 PDCP20941 246 aa6.4□□□□□ -1.39
SDR42E1-201ENST00000328945 RILPL2Q969X0 211 aa6.4□□□□□ -1.39
SDR42E1-201ENST00000328945 AKAP17AQ02040 695 aaKnown RBP6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 NUTM2GQ5VZR2 741 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 PDE4DIPQ5VU43 2346 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 XPCQ01831 940 aaPredicted RBP6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 TTLL5Q6EMB2 1281 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 DHX16O60231 1041 aaKnown RBP6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 PDILTQ8N807 584 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 NECTIN2Q92692 538 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 LRRCC1Q9C099 1032 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 CFTRP13569 1480 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 CCAR1Q8IX12 1150 aaKnown RBP6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 KRT222Q8N1A0 295 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 CCDC102AQ96A19 550 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 STRN4Q9NRL3 753 aa6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 EIF2S2P20042 333 aaKnown RBP6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 RRP7AQ9Y3A4 280 aaKnown RBP6.39□□□□□ -1.39
SDR42E1-201ENST00000328945 FILIP1Q7Z7B0 1213 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 PCMTD1Q96MG8 357 aaPredicted RBP6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 CCDC43Q96MW1 224 aaKnown RBP6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 K7ELQ4 463 aaPredicted RBP6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 NEXNQ0ZGT2 675 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 TEFQ10587 303 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 UBXN4Q92575 508 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 MYO10Q9HD67 2058 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 SMARCE1Q969G3 411 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 GBP3Q9H0R5 595 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 URB1O60287 2271 aaKnown RBP6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 FYB1O15117 783 aa6.38□□□□□ -1.39
SDR42E1-201ENST00000328945 GTF2F1P35269 517 aaKnown RBP eCLIP6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 BCL2L13Q9BXK5 485 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 NAP1L1P55209 391 aaKnown RBP6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 FHOD3Q2V2M9 1422 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 WDR33Q9C0J8 1336 aaKnown RBP6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 KIF20AO95235 890 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 IPO4Q8TEX9 1081 aaKnown RBP6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 PTPRGP23470 1445 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 CC2D2AQ9P2K1 1620 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 RSPH4AQ5TD94 716 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 TRIM29Q14134 588 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 PANK1Q8TE04 598 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 NLRP2Q9NX02 1062 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 CPLX1O14810 134 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 IVLP07476 585 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 SDF4Q9BRK5 362 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 TNMDQ9H2S6 317 aa6.37□□□□□ -1.39
SDR42E1-201ENST00000328945 LRRFIP1Q32MZ4 808 aaKnown RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CT47A1Q5JQC4 288 aaPredicted RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 UACAQ9BZF9 1416 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 SYCE3A1L190 88 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 PIP4K2AP48426 406 aaPredicted RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CENPHQ9H3R5 247 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 PLEKHH2Q8IVE3 1493 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CBFA2T2O43439 604 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 MICALCLQ6ZW33 695 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 KIF18AQ8NI77 898 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CCDC47Q96A33 483 aaKnown RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 FIBPO43427 364 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 SYNE3Q6ZMZ3 975 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CEP57L1Q8IYX8 460 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CUX1P39880 1505 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 POTEB2H3BUK9 544 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 MAP9Q49MG5 647 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 C9orf78Q9NZ63 289 aaPredicted RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 HS1BP3Q53T59 392 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CPLX2Q6PUV4 134 aaKnown RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 CADPSQ9ULU8 1353 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 NF2P35240 595 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 SKIDA1Q1XH10 827 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 ERLIN2O94905 339 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 API5Q9BZZ5 524 aaKnown RBP6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 PANK3Q9H999 370 aa6.36□□□□□ -1.39
SDR42E1-201ENST00000328945 MNAT1P51948 309 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 AK9Q5TCS8 1911 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 MCM3P25205 808 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 LUZP1Q86V48 1076 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 CCDC144AA2RUR9 1427 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 FAM177BA6PVY3 158 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 NEMFO60524 1076 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 PSMA5P28066 241 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 DNAAF4Q8WXU2 420 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 TRERF1Q96PN7 1200 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 LNPKQ9C0E8 428 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 SSR1P43307 286 aaKnown RBP6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 PDE3AQ14432 1141 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 ZNF396Q96N95 335 aaPredicted RBP6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 PTPN14Q15678 1187 aa6.35□□□□□ -1.39
SDR42E1-201ENST00000328945 EVC2Q86UK5 1308 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 ST20-MTHFSA0A0A6YYL1 179 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 TDO2P48775 406 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 CCDC91Q7Z6B0 441 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 CCDC27Q2M243 656 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 MIA2Q96PC5 1412 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 TNNT1P13805 278 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms