RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 CABP1Q9NZU7 370 aa30.6■■■□□ 2.49
TNRC18-201ENST00000328270 ATAD2Q6PL18 1390 aa30.58■■■□□ 2.49
TNRC18-201ENST00000328270 FNBP4Q8N3X1 1017 aaPredicted RBP30.58■■■□□ 2.49
TNRC18-201ENST00000328270 AKAP12Q02952 1782 aa30.58■■■□□ 2.49
TNRC18-201ENST00000328270 ST20-MTHFSA0A0A6YYL1 179 aa30.56■■■□□ 2.48
TNRC18-201ENST00000328270 USP21Q9UK80 565 aa30.56■■■□□ 2.48
TNRC18-201ENST00000328270 USP47Q96K76 1375 aa30.55■■■□□ 2.48
TNRC18-201ENST00000328270 PLCH1Q4KWH8 1693 aa30.55■■■□□ 2.48
TNRC18-201ENST00000328270 PHRF1Q9P1Y6 1649 aaKnown RBP30.55■■■□□ 2.48
TNRC18-201ENST00000328270 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.54■■■□□ 2.48
TNRC18-201ENST00000328270 USP6P35125 1406 aa30.54■■■□□ 2.48
TNRC18-201ENST00000328270 QTRT2Q9H974 415 aaKnown RBP30.53■■■□□ 2.48
TNRC18-201ENST00000328270 TESK2Q96S53 571 aa30.52■■■□□ 2.48
TNRC18-201ENST00000328270 BCL9LQ86UU0 1499 aa30.51■■■□□ 2.48
TNRC18-201ENST00000328270 RXRBP28702 533 aa30.51■■■□□ 2.47
TNRC18-201ENST00000328270 SLIT2O94813 1529 aa30.51■■■□□ 2.47
TNRC18-201ENST00000328270 BRD4O60885 1362 aaPredicted RBP30.51■■■□□ 2.47
TNRC18-201ENST00000328270 NWD2Q9ULI1 1742 aa30.5■■■□□ 2.47
TNRC18-201ENST00000328270 NUTM2GQ5VZR2 741 aa30.49■■■□□ 2.47
TNRC18-201ENST00000328270 ATRNO75882 1429 aa30.48■■■□□ 2.47
TNRC18-201ENST00000328270 MON2Q7Z3U7 1717 aa30.48■■■□□ 2.47
TNRC18-201ENST00000328270 ABTB2Q8N961 1025 aa30.47■■■□□ 2.47
TNRC18-201ENST00000328270 TRPC5Q9UL62 973 aaPredicted RBP30.47■■■□□ 2.47
TNRC18-201ENST00000328270 COL14A1Q05707 1796 aaKnown RBP30.46■■■□□ 2.47
TNRC18-201ENST00000328270 NRKQ7Z2Y5 1582 aa30.46■■■□□ 2.47
TNRC18-201ENST00000328270 CDK12Q9NYV4 1490 aaPredicted RBP30.46■■■□□ 2.47
TNRC18-201ENST00000328270 CPSF1Q10570 1443 aaKnown RBP30.46■■■□□ 2.47
TNRC18-201ENST00000328270 SSH2Q76I76 1423 aa30.46■■■□□ 2.47
TNRC18-201ENST00000328270 RBM6P78332 1123 aaKnown RBP30.45■■■□□ 2.47
TNRC18-201ENST00000328270 PIK3C2AO00443 1686 aa30.45■■■□□ 2.46
TNRC18-201ENST00000328270 SLC24A1O60721 1099 aa30.44■■■□□ 2.46
TNRC18-201ENST00000328270 PUS7Q96PZ0 661 aaKnown RBP30.43■■■□□ 2.46
TNRC18-201ENST00000328270 ZNF692Q9BU19 519 aaPredicted RBP30.43■■■□□ 2.46
TNRC18-201ENST00000328270 NRAPQ86VF7 1730 aa30.42■■■□□ 2.46
TNRC18-201ENST00000328270 FAM83GA6ND36 823 aa30.42■■■□□ 2.46
TNRC18-201ENST00000328270 UNC5CLQ8IV45 518 aa30.42■■■□□ 2.46
TNRC18-201ENST00000328270 TMC1Q8TDI8 760 aa30.41■■■□□ 2.46
TNRC18-201ENST00000328270 CD163L1Q9NR16 1453 aa30.41■■■□□ 2.46
TNRC18-201ENST00000328270 KTN1Q86UP2 1357 aaKnown RBP30.41■■■□□ 2.46
TNRC18-201ENST00000328270 USP19O94966 1318 aa30.4■■■□□ 2.46
TNRC18-201ENST00000328270 RGS12O14924 1447 aa30.39■■■□□ 2.46
TNRC18-201ENST00000328270 NLRP13Q86W25 1043 aa30.39■■■□□ 2.46
TNRC18-201ENST00000328270 TTC21BQ7Z4L5 1316 aa30.38■■■□□ 2.45
TNRC18-201ENST00000328270 SLC12A5Q9H2X9 1139 aa30.37■■■□□ 2.45
TNRC18-201ENST00000328270 PRDM11Q9NQV5 511 aa30.37■■■□□ 2.45
TNRC18-201ENST00000328270 KIAA0232Q92628 1395 aa30.37■■■□□ 2.45
TNRC18-201ENST00000328270 TMF1P82094 1093 aa30.36■■■□□ 2.45
TNRC18-201ENST00000328270 NLRP6P59044 892 aa30.35■■■□□ 2.45
TNRC18-201ENST00000328270 GLI3P10071 1580 aa30.35■■■□□ 2.45
TNRC18-201ENST00000328270 SLIT3O75094 1523 aa30.34■■■□□ 2.45
TNRC18-201ENST00000328270 NINLQ9Y2I6 1382 aa30.34■■■□□ 2.45
TNRC18-201ENST00000328270 TTC21AQ8NDW8 1320 aa30.34■■■□□ 2.45
TNRC18-201ENST00000328270 ZC3H6P61129 1189 aaKnown RBP30.34■■■□□ 2.45
TNRC18-201ENST00000328270 HDGFL2Q7Z4V5 671 aaPredicted RBP30.33■■■□□ 2.45
TNRC18-201ENST00000328270 GJD4Q96KN9 370 aaPredicted RBP30.33■■■□□ 2.45
TNRC18-201ENST00000328270 BTG4Q9NY30 223 aa30.33■■■□□ 2.45
TNRC18-201ENST00000328270 A0A1W2PP64 1363 aa30.31■■■□□ 2.44
TNRC18-201ENST00000328270 TERF2IPQ9NYB0 399 aa30.31■■■□□ 2.44
TNRC18-201ENST00000328270 GCP02774 474 aa30.3■■■□□ 2.44
TNRC18-201ENST00000328270 CHRNA2Q15822 529 aa30.3■■■□□ 2.44
TNRC18-201ENST00000328270 VPS72Q15906 364 aa30.3■■■□□ 2.44
TNRC18-201ENST00000328270 CPDO75976 1380 aa30.29■■■□□ 2.44
TNRC18-201ENST00000328270 EDC4Q6P2E9 1401 aaKnown RBP30.29■■■□□ 2.44
TNRC18-201ENST00000328270 USP54Q70EL1 1684 aa30.28■■■□□ 2.44
TNRC18-201ENST00000328270 LMO7Q8WWI1 1683 aa30.27■■■□□ 2.44
TNRC18-201ENST00000328270 CDCA8Q53HL2 280 aa30.26■■■□□ 2.43
TNRC18-201ENST00000328270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.26■■■□□ 2.43
TNRC18-201ENST00000328270 CCDC9Q9Y3X0 531 aaKnown RBP30.26■■■□□ 2.43
TNRC18-201ENST00000328270 MYOM1P52179 1685 aa30.24■■■□□ 2.43
TNRC18-201ENST00000328270 EIF4G2P78344 907 aaKnown RBP eCLIP30.24■■■□□ 2.43
TNRC18-201ENST00000328270 CAMTA1Q9Y6Y1 1673 aa30.22■■■□□ 2.43
TNRC18-201ENST00000328270 BRWD3Q6RI45 1802 aa30.22■■■□□ 2.43
TNRC18-201ENST00000328270 USP31Q70CQ4 1352 aa30.21■■■□□ 2.43
TNRC18-201ENST00000328270 ANKRD36BQ8N2N9 1353 aa30.21■■■□□ 2.43
TNRC18-201ENST00000328270 HSPA5P11021 654 aaKnown RBP30.21■■■□□ 2.43
TNRC18-201ENST00000328270 NME9Q86XW9 330 aa30.21■■■□□ 2.43
TNRC18-201ENST00000328270 ZRANB1Q9UGI0 708 aa30.2■■■□□ 2.43
TNRC18-201ENST00000328270 NFAT5O94916 1531 aa30.2■■■□□ 2.42
TNRC18-201ENST00000328270 COL18A1P39060 1754 aa30.19■■■□□ 2.42
TNRC18-201ENST00000328270 ZBTB7CA1YPR0 619 aa30.18■■■□□ 2.42
TNRC18-201ENST00000328270 KCNH5Q8NCM2 988 aa30.18■■■□□ 2.42
TNRC18-201ENST00000328270 SOX12O15370 315 aa30.17■■■□□ 2.42
TNRC18-201ENST00000328270 STRN4Q9NRL3 753 aa30.17■■■□□ 2.42
TNRC18-201ENST00000328270 SPATA31A5Q5VU36 1347 aa30.16■■■□□ 2.42
TNRC18-201ENST00000328270 SPATA31A7Q8IWB4 1347 aa30.16■■■□□ 2.42
TNRC18-201ENST00000328270 RGPD5Q99666 1765 aa30.15■■■□□ 2.42
TNRC18-201ENST00000328270 AATKQ6ZMQ8 1374 aa30.15■■■□□ 2.42
TNRC18-201ENST00000328270 EP400Q96L91 3159 aa30.14■■■□□ 2.42
TNRC18-201ENST00000328270 LTN1O94822 1766 aa30.14■■■□□ 2.42
TNRC18-201ENST00000328270 OVOS2A0A0J9YW53 1432 aa30.13■■■□□ 2.41
TNRC18-201ENST00000328270 OVOS2Q6IE36 1432 aa30.13■■■□□ 2.41
TNRC18-201ENST00000328270 COL5A2P05997 1499 aaPredicted RBP30.13■■■□□ 2.41
TNRC18-201ENST00000328270 EVA1CP58658 441 aa30.13■■■□□ 2.41
TNRC18-201ENST00000328270 ARHGEF25Q86VW2 580 aa30.12■■■□□ 2.41
TNRC18-201ENST00000328270 KIF20BQ96Q89 1820 aa30.11■■■□□ 2.41
TNRC18-201ENST00000328270 ONECUT3O60422 494 aaPredicted RBP30.11■■■□□ 2.41
TNRC18-201ENST00000328270 FAM98CQ17RN3 349 aaKnown RBP30.11■■■□□ 2.41
TNRC18-201ENST00000328270 SEPT12Q8IYM1 358 aa30.11■■■□□ 2.41
TNRC18-201ENST00000328270 UPF1Q92900 1129 aaKnown RBP eCLIP30.1■■■□□ 2.41
TNRC18-201ENST00000328270 SPATA31A1Q5TZJ5 1347 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms