RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
PRPF3-201ENST00000324862 NUTM2GQ5VZR2 741 aa20.77■□□□□ 0.92
PRPF3-201ENST00000324862 PSME1Q06323 249 aa20.77■□□□□ 0.92
PRPF3-201ENST00000324862 RALBP1Q15311 655 aa20.77■□□□□ 0.92
PRPF3-201ENST00000324862 BRINP3Q76B58 766 aa20.77■□□□□ 0.92
PRPF3-201ENST00000324862 MON2Q7Z3U7 1717 aa20.77■□□□□ 0.92
PRPF3-201ENST00000324862 SSH2Q76I76 1423 aa20.76■□□□□ 0.91
PRPF3-201ENST00000324862 NPC1L1Q9UHC9 1359 aa20.76■□□□□ 0.91
PRPF3-201ENST00000324862 MORC1Q86VD1 984 aa20.76■□□□□ 0.91
PRPF3-201ENST00000324862 PLEKHG5O94827 1062 aa20.75■□□□□ 0.91
PRPF3-201ENST00000324862 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
PRPF3-201ENST00000324862 PPP2R1AP30153 589 aa20.74■□□□□ 0.91
PRPF3-201ENST00000324862 NRKQ7Z2Y5 1582 aa20.74■□□□□ 0.91
PRPF3-201ENST00000324862 SOX12O15370 315 aa20.72■□□□□ 0.91
PRPF3-201ENST00000324862 KRT28Q7Z3Y7 464 aa20.72■□□□□ 0.91
PRPF3-201ENST00000324862 MRS2Q9HD23 443 aa20.71■□□□□ 0.91
PRPF3-201ENST00000324862 CCER2I3L3R5 266 aa20.7■□□□□ 0.91
PRPF3-201ENST00000324862 ABTB2Q8N961 1025 aa20.7■□□□□ 0.9
PRPF3-201ENST00000324862 LMOD2Q6P5Q4 547 aa20.69■□□□□ 0.9
PRPF3-201ENST00000324862 NSD2O96028 1365 aa20.69■□□□□ 0.9
PRPF3-201ENST00000324862 COG3Q96JB2 828 aa20.68■□□□□ 0.9
PRPF3-201ENST00000324862 NLRP6P59044 892 aa20.67■□□□□ 0.9
PRPF3-201ENST00000324862 NLRP13Q86W25 1043 aa20.67■□□□□ 0.9
PRPF3-201ENST00000324862 KIF20BQ96Q89 1820 aa20.67■□□□□ 0.9
PRPF3-201ENST00000324862 PIP4K2BP78356 416 aa20.66■□□□□ 0.9
PRPF3-201ENST00000324862 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
PRPF3-201ENST00000324862 PIK3C2AO00443 1686 aa20.66■□□□□ 0.9
PRPF3-201ENST00000324862 NPHP3Q7Z494 1330 aa20.65■□□□□ 0.9
PRPF3-201ENST00000324862 KIF1AQ12756 1690 aa20.65■□□□□ 0.9
PRPF3-201ENST00000324862 OVOS2A0A0J9YW53 1432 aa20.65■□□□□ 0.9
PRPF3-201ENST00000324862 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
PRPF3-201ENST00000324862 OVOS2Q6IE36 1432 aa20.65■□□□□ 0.9
PRPF3-201ENST00000324862 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
PRPF3-201ENST00000324862 MTHFSP49914 203 aa20.64■□□□□ 0.89
PRPF3-201ENST00000324862 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
PRPF3-201ENST00000324862 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
PRPF3-201ENST00000324862 FAM9BQ8IZU0 186 aa20.63■□□□□ 0.89
PRPF3-201ENST00000324862 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
PRPF3-201ENST00000324862 PXDNQ92626 1479 aa20.62■□□□□ 0.89
PRPF3-201ENST00000324862 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
PRPF3-201ENST00000324862 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
PRPF3-201ENST00000324862 BRD4O60885 1362 aaPredicted RBP20.61■□□□□ 0.89
PRPF3-201ENST00000324862 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
PRPF3-201ENST00000324862 TRPM3Q9HCF6 1732 aaPredicted RBP20.6■□□□□ 0.89
PRPF3-201ENST00000324862 ANKRD26Q9UPS8 1709 aa20.6■□□□□ 0.89
PRPF3-201ENST00000324862 SENP3-EIF4A1A0A087X0R7 540 aa20.59■□□□□ 0.89
PRPF3-201ENST00000324862 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
PRPF3-201ENST00000324862 ROBO1Q9Y6N7 1651 aa20.59■□□□□ 0.89
PRPF3-201ENST00000324862 TOM1O60784 492 aa20.59■□□□□ 0.89
PRPF3-201ENST00000324862 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
PRPF3-201ENST00000324862 SOS2Q07890 1332 aaPredicted RBP20.59■□□□□ 0.89
PRPF3-201ENST00000324862 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.88
PRPF3-201ENST00000324862 MARF1Q9Y4F3 1742 aaKnown RBP20.57■□□□□ 0.88
PRPF3-201ENST00000324862 SPATA31A3Q5VYP0 1347 aa20.57■□□□□ 0.88
PRPF3-201ENST00000324862 TNS3Q68CZ2 1445 aa20.55■□□□□ 0.88
PRPF3-201ENST00000324862 SBNO1A3KN83 1393 aa20.55■□□□□ 0.88
PRPF3-201ENST00000324862 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
PRPF3-201ENST00000324862 ZBTB7CA1YPR0 619 aa20.53■□□□□ 0.88
PRPF3-201ENST00000324862 ALS2Q96Q42 1657 aa20.53■□□□□ 0.88
PRPF3-201ENST00000324862 AATKQ6ZMQ8 1374 aa20.53■□□□□ 0.88
PRPF3-201ENST00000324862 GCP02774 474 aa20.52■□□□□ 0.88
PRPF3-201ENST00000324862 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
PRPF3-201ENST00000324862 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
PRPF3-201ENST00000324862 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
PRPF3-201ENST00000324862 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
PRPF3-201ENST00000324862 USP19O94966 1318 aa20.5■□□□□ 0.87
PRPF3-201ENST00000324862 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
PRPF3-201ENST00000324862 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
PRPF3-201ENST00000324862 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
PRPF3-201ENST00000324862 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
PRPF3-201ENST00000324862 NFAT5O94916 1531 aa20.47■□□□□ 0.87
PRPF3-201ENST00000324862 COL3A1P02461 1466 aaPredicted RBP20.47■□□□□ 0.87
PRPF3-201ENST00000324862 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
PRPF3-201ENST00000324862 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
PRPF3-201ENST00000324862 AMPHP49418 695 aa20.46■□□□□ 0.87
PRPF3-201ENST00000324862 USP54Q70EL1 1684 aa20.46■□□□□ 0.87
PRPF3-201ENST00000324862 ARHGEF10O15013 1369 aa20.46■□□□□ 0.87
PRPF3-201ENST00000324862 IQSEC2Q5JU85 1478 aa20.46■□□□□ 0.87
PRPF3-201ENST00000324862 SLIT3O75094 1523 aa20.45■□□□□ 0.86
PRPF3-201ENST00000324862 AHDC1Q5TGY3 1603 aaPredicted RBP20.45■□□□□ 0.86
PRPF3-201ENST00000324862 KCNH5Q8NCM2 988 aa20.45■□□□□ 0.86
PRPF3-201ENST00000324862 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
PRPF3-201ENST00000324862 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
PRPF3-201ENST00000324862 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
PRPF3-201ENST00000324862 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
PRPF3-201ENST00000324862 HOXC9P31274 260 aa20.43■□□□□ 0.86
PRPF3-201ENST00000324862 ARHGEF25Q86VW2 580 aa20.43■□□□□ 0.86
PRPF3-201ENST00000324862 CCDC146Q8IYE0 955 aa20.43■□□□□ 0.86
PRPF3-201ENST00000324862 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
PRPF3-201ENST00000324862 SHPRHQ149N8 1683 aa20.43■□□□□ 0.86
PRPF3-201ENST00000324862 CHRNA2Q15822 529 aa20.43■□□□□ 0.86
PRPF3-201ENST00000324862 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
PRPF3-201ENST00000324862 EIF4A2Q14240 407 aaKnown RBP20.42■□□□□ 0.86
PRPF3-201ENST00000324862 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
PRPF3-201ENST00000324862 IL13P35225 146 aa20.42■□□□□ 0.86
PRPF3-201ENST00000324862 U2AF1L5P0DN76 240 aaPredicted RBP20.41■□□□□ 0.86
PRPF3-201ENST00000324862 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRPF3-201ENST00000324862 U2AF1Q01081 240 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRPF3-201ENST00000324862 FLT4P35916 1363 aa20.41■□□□□ 0.86
PRPF3-201ENST00000324862 COL16A1Q07092 1604 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms