RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC149-201ENST00000324309 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
CCDC149-201ENST00000324309 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
CCDC149-201ENST00000324309 RBM33Q96EV2 1170 aaKnown RBP15.84■□□□□ 0.13
CCDC149-201ENST00000324309 KCNA6P17658 529 aa15.84■□□□□ 0.13
CCDC149-201ENST00000324309 PTPRKQ15262 1439 aa15.83■□□□□ 0.12
CCDC149-201ENST00000324309 PRAG1Q86YV5 1406 aa15.83■□□□□ 0.12
CCDC149-201ENST00000324309 TCP11L2Q8N4U5 519 aa15.83■□□□□ 0.12
CCDC149-201ENST00000324309 NLRP1Q9C000 1473 aa15.82■□□□□ 0.12
CCDC149-201ENST00000324309 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
CCDC149-201ENST00000324309 UBAP1LF5GYI3 381 aa15.82■□□□□ 0.12
CCDC149-201ENST00000324309 SAMD9LQ8IVG5 1584 aa15.81■□□□□ 0.12
CCDC149-201ENST00000324309 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
CCDC149-201ENST00000324309 GNAT3A8MTJ3 354 aa15.8■□□□□ 0.12
CCDC149-201ENST00000324309 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
CCDC149-201ENST00000324309 STARD3NLO95772 234 aa15.8■□□□□ 0.12
CCDC149-201ENST00000324309 RRP1P56182 461 aaKnown RBP15.8■□□□□ 0.12
CCDC149-201ENST00000324309 CCDC34Q96HJ3 373 aa15.8■□□□□ 0.12
CCDC149-201ENST00000324309 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
CCDC149-201ENST00000324309 VPS37DQ86XT2 251 aa15.8■□□□□ 0.12
CCDC149-201ENST00000324309 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
CCDC149-201ENST00000324309 ERC1Q8IUD2 1116 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 ERC2O15083 957 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 NGLY1Q96IV0 654 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 LRRC59Q96AG4 307 aaKnown RBP15.79■□□□□ 0.12
CCDC149-201ENST00000324309 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
CCDC149-201ENST00000324309 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 APBB1O00213 710 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 TRIM34Q9BYJ4 488 aa15.79■□□□□ 0.12
CCDC149-201ENST00000324309 IFIT2P09913 472 aaKnown RBP15.78■□□□□ 0.12
CCDC149-201ENST00000324309 GNL2Q13823 731 aaKnown RBP15.78■□□□□ 0.12
CCDC149-201ENST00000324309 TMEM2Q9UHN6 1383 aa15.78■□□□□ 0.12
CCDC149-201ENST00000324309 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
CCDC149-201ENST00000324309 ELL2O00472 640 aaPredicted RBP15.78■□□□□ 0.12
CCDC149-201ENST00000324309 CCT4P50991 539 aaKnown RBP15.78■□□□□ 0.12
CCDC149-201ENST00000324309 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.12
CCDC149-201ENST00000324309 USP35Q9P2H5 1018 aa15.77■□□□□ 0.12
CCDC149-201ENST00000324309 UBTFL1P0CB47 393 aaPredicted RBP15.77■□□□□ 0.12
CCDC149-201ENST00000324309 ADAMTS8Q9UP79 889 aa15.77■□□□□ 0.11
CCDC149-201ENST00000324309 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.11
CCDC149-201ENST00000324309 ACEP12821 1306 aa15.77■□□□□ 0.11
CCDC149-201ENST00000324309 CDCA7Q9BWT1 371 aaPredicted RBP15.77■□□□□ 0.11
CCDC149-201ENST00000324309 FOXO3O43524 673 aa15.76■□□□□ 0.11
CCDC149-201ENST00000324309 KDM6BO15054 1643 aa15.76■□□□□ 0.11
CCDC149-201ENST00000324309 GOLGA6L4A6NEF3 574 aa15.76■□□□□ 0.11
CCDC149-201ENST00000324309 PPIP5K1Q6PFW1 1433 aa15.76■□□□□ 0.11
CCDC149-201ENST00000324309 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
CCDC149-201ENST00000324309 EXOC5O00471 708 aa15.76■□□□□ 0.11
CCDC149-201ENST00000324309 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
CCDC149-201ENST00000324309 ZC3H6P61129 1189 aaKnown RBP15.76■□□□□ 0.11
CCDC149-201ENST00000324309 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
CCDC149-201ENST00000324309 C11orf95C9JLR9 678 aaPredicted RBP15.75■□□□□ 0.11
CCDC149-201ENST00000324309 GOLGA6L6A8MZA4 724 aa15.75■□□□□ 0.11
CCDC149-201ENST00000324309 MBD5Q9P267 1494 aa15.75■□□□□ 0.11
CCDC149-201ENST00000324309 NCKAP5LQ9HCH0 1330 aa15.75■□□□□ 0.11
CCDC149-201ENST00000324309 TWISTNBQ3B726 338 aaPredicted RBP15.75■□□□□ 0.11
CCDC149-201ENST00000324309 B4GALNT3Q6L9W6 998 aa15.75■□□□□ 0.11
CCDC149-201ENST00000324309 HSP90AB3PQ58FF7 597 aa15.74■□□□□ 0.11
CCDC149-201ENST00000324309 TTC37Q6PGP7 1564 aa15.74■□□□□ 0.11
CCDC149-201ENST00000324309 ZFYVE9O95405 1425 aa15.74■□□□□ 0.11
CCDC149-201ENST00000324309 PZPP20742 1482 aa15.74■□□□□ 0.11
CCDC149-201ENST00000324309 HDGFL1Q5TGJ6 251 aa15.74■□□□□ 0.11
CCDC149-201ENST00000324309 CSPP1Q1MSJ5 1256 aa15.73■□□□□ 0.11
CCDC149-201ENST00000324309 A0A087WZG4 1122 aa15.73■□□□□ 0.11
CCDC149-201ENST00000324309 BTBD11A6QL63 1104 aa15.73■□□□□ 0.11
CCDC149-201ENST00000324309 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
CCDC149-201ENST00000324309 ARHGEF10O15013 1369 aa15.73■□□□□ 0.11
CCDC149-201ENST00000324309 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
CCDC149-201ENST00000324309 PIK3C2GO75747 1445 aa15.72■□□□□ 0.11
CCDC149-201ENST00000324309 DIAPH3Q9NSV4 1193 aa15.72■□□□□ 0.11
CCDC149-201ENST00000324309 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
CCDC149-201ENST00000324309 IFT57Q9NWB7 429 aa15.71■□□□□ 0.11
CCDC149-201ENST00000324309 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
CCDC149-201ENST00000324309 XPCQ01831 940 aaPredicted RBP15.71■□□□□ 0.11
CCDC149-201ENST00000324309 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
CCDC149-201ENST00000324309 PLEKHG1Q9ULL1 1385 aa15.71■□□□□ 0.11
CCDC149-201ENST00000324309 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.11
CCDC149-201ENST00000324309 PIK3R4Q99570 1358 aa15.71■□□□□ 0.1
CCDC149-201ENST00000324309 SYNE3Q6ZMZ3 975 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 NME9Q86XW9 330 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
CCDC149-201ENST00000324309 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 PDE3AQ14432 1141 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 HIP1O00291 1037 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 ST18O60284 1047 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 REC8O95072 547 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 RNF20Q5VTR2 975 aa15.7■□□□□ 0.1
CCDC149-201ENST00000324309 CPLX2Q6PUV4 134 aaKnown RBP15.69■□□□□ 0.1
CCDC149-201ENST00000324309 NRDCO43847 1150 aa15.69■□□□□ 0.1
CCDC149-201ENST00000324309 ASXL1Q8IXJ9 1541 aa15.69■□□□□ 0.1
CCDC149-201ENST00000324309 TAF7Q15545 349 aaPredicted RBP15.68■□□□□ 0.1
CCDC149-201ENST00000324309 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
CCDC149-201ENST00000324309 NPATQ14207 1427 aa15.68■□□□□ 0.1
CCDC149-201ENST00000324309 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
CCDC149-201ENST00000324309 AIMP1Q12904 312 aaKnown RBP15.68■□□□□ 0.1
CCDC149-201ENST00000324309 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
CCDC149-201ENST00000324309 ADAMTS2O95450 1211 aa15.67■□□□□ 0.1
CCDC149-201ENST00000324309 SRCIN1Q9C0H9 1055 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms