RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 ZNF335Q9H4Z2 1342 aaPredicted RBP42.11■■■■■ 4.33
NECTIN3-201ENST00000319792 INSRP06213 1382 aa42.1■■■■■ 4.33
NECTIN3-201ENST00000319792 PHF8Q9UPP1 1060 aa42.1■■■■■ 4.33
NECTIN3-201ENST00000319792 NME9Q86XW9 330 aa42.1■■■■■ 4.33
NECTIN3-201ENST00000319792 SCAF1Q9H7N4 1312 aaKnown RBP42.09■■■■■ 4.33
NECTIN3-201ENST00000319792 KIF1AQ12756 1690 aa42.09■■■■■ 4.33
NECTIN3-201ENST00000319792 TTC21AQ8NDW8 1320 aa42.08■■■■■ 4.33
NECTIN3-201ENST00000319792 TNNT2P45379 298 aaPredicted RBP42.08■■■■■ 4.33
NECTIN3-201ENST00000319792 C1orf167Q5SNV9 1468 aa42.07■■■■■ 4.32
NECTIN3-201ENST00000319792 MST1RQ04912 1400 aa42.05■■■■■ 4.32
NECTIN3-201ENST00000319792 USP54Q70EL1 1684 aa42.03■■■■■ 4.32
NECTIN3-201ENST00000319792 MSH6P52701 1360 aa42.03■■■■■ 4.32
NECTIN3-201ENST00000319792 OVOS2A0A0J9YW53 1432 aa42.03■■■■■ 4.32
NECTIN3-201ENST00000319792 OVOS2Q6IE36 1432 aa42.03■■■■■ 4.32
NECTIN3-201ENST00000319792 PIK3C2AO00443 1686 aa42.02■■■■■ 4.32
NECTIN3-201ENST00000319792 SHPRHQ149N8 1683 aa42.02■■■■■ 4.32
NECTIN3-201ENST00000319792 ATF3P18847 181 aa42.01■■■■■ 4.32
NECTIN3-201ENST00000319792 HNRNPUQ00839 825 aaKnown RBP eCLIP42.01■■■■■ 4.32
NECTIN3-201ENST00000319792 ESCO1Q5FWF5 840 aa42■■■■■ 4.31
NECTIN3-201ENST00000319792 MAP2P11137 1827 aaKnown RBP42■■■■■ 4.31
NECTIN3-201ENST00000319792 MTHFSP49914 203 aa42■■■■■ 4.31
NECTIN3-201ENST00000319792 COG3Q96JB2 828 aa42■■■■■ 4.31
NECTIN3-201ENST00000319792 AATKQ6ZMQ8 1374 aa41.98■■■■■ 4.31
NECTIN3-201ENST00000319792 CADPS2Q86UW7 1296 aa41.98■■■■■ 4.31
NECTIN3-201ENST00000319792 ZRANB1Q9UGI0 708 aa41.97■■■■■ 4.31
NECTIN3-201ENST00000319792 BLMP54132 1417 aaPredicted RBP41.97■■■■■ 4.31
NECTIN3-201ENST00000319792 USP31Q70CQ4 1352 aa41.96■■■■■ 4.31
NECTIN3-201ENST00000319792 ORAI2Q96SN7 254 aa41.94■■■■■ 4.3
NECTIN3-201ENST00000319792 SMG6Q86US8 1419 aaKnown RBP41.94■■■■■ 4.3
NECTIN3-201ENST00000319792 MARF1Q9Y4F3 1742 aaKnown RBP41.93■■■■■ 4.3
NECTIN3-201ENST00000319792 CFAP53Q96M91 514 aa41.93■■■■■ 4.3
NECTIN3-201ENST00000319792 COL3A1P02461 1466 aaPredicted RBP41.92■■■■■ 4.3
NECTIN3-201ENST00000319792 WDR43Q15061 677 aaKnown RBP eCLIP41.9■■■■■ 4.3
NECTIN3-201ENST00000319792 TRPM3Q9HCF6 1732 aaPredicted RBP41.89■■■■■ 4.3
NECTIN3-201ENST00000319792 PNPLA6Q8IY17 1366 aa41.88■■■■■ 4.29
NECTIN3-201ENST00000319792 ADAMTS8Q9UP79 889 aa41.86■■■■■ 4.29
NECTIN3-201ENST00000319792 ZBED9Q6R2W3 1325 aa41.86■■■■■ 4.29
NECTIN3-201ENST00000319792 POLKQ9UBT6 870 aa41.85■■■■■ 4.29
NECTIN3-201ENST00000319792 CDK12Q9NYV4 1490 aaPredicted RBP41.83■■■■■ 4.29
NECTIN3-201ENST00000319792 PSME1Q06323 249 aa41.83■■■■■ 4.29
NECTIN3-201ENST00000319792 LTBP4Q8N2S1 1624 aa41.79■■■■■ 4.28
NECTIN3-201ENST00000319792 FOXO3O43524 673 aa41.78■■■■■ 4.28
NECTIN3-201ENST00000319792 FBLN1P23142 703 aa41.76■■■■■ 4.28
NECTIN3-201ENST00000319792 PAK3O75914 559 aaPredicted RBP41.74■■■■■ 4.27
NECTIN3-201ENST00000319792 ABTB2Q8N961 1025 aa41.74■■■■■ 4.27
NECTIN3-201ENST00000319792 EMILIN1Q9Y6C2 1016 aa41.73■■■■■ 4.27
NECTIN3-201ENST00000319792 ALS2Q96Q42 1657 aa41.72■■■■■ 4.27
NECTIN3-201ENST00000319792 NLRP6P59044 892 aa41.72■■■■■ 4.27
NECTIN3-201ENST00000319792 PEAK1Q9H792 1746 aa41.7■■■■■ 4.27
NECTIN3-201ENST00000319792 KRT28Q7Z3Y7 464 aa41.69■■■■■ 4.26
NECTIN3-201ENST00000319792 RRS1Q15050 365 aaKnown RBP41.67■■■■■ 4.26
NECTIN3-201ENST00000319792 DIAPH1O60610 1272 aaKnown RBP41.66■■■■■ 4.26
NECTIN3-201ENST00000319792 NUDCQ9Y266 331 aa41.66■■■■■ 4.26
NECTIN3-201ENST00000319792 NPHP3Q7Z494 1330 aa41.66■■■■■ 4.26
NECTIN3-201ENST00000319792 SLAIN2Q9P270 581 aa41.65■■■■■ 4.26
NECTIN3-201ENST00000319792 PXDNQ92626 1479 aa41.65■■■■■ 4.26
NECTIN3-201ENST00000319792 SBNO1A3KN83 1393 aa41.64■■■■■ 4.26
NECTIN3-201ENST00000319792 PPM1GO15355 546 aaPredicted RBP41.63■■■■■ 4.25
NECTIN3-201ENST00000319792 XPCQ01831 940 aaPredicted RBP41.63■■■■■ 4.25
NECTIN3-201ENST00000319792 BRINP3Q76B58 766 aa41.63■■■■■ 4.25
NECTIN3-201ENST00000319792 SLIT3O75094 1523 aa41.63■■■■■ 4.25
NECTIN3-201ENST00000319792 NFAT5O94916 1531 aa41.62■■■■■ 4.25
NECTIN3-201ENST00000319792 NUTM2GQ5VZR2 741 aa41.61■■■■■ 4.25
NECTIN3-201ENST00000319792 KIF24Q5T7B8 1368 aa41.59■■■■■ 4.25
NECTIN3-201ENST00000319792 MAP3K19Q56UN5 1328 aa41.58■■■■■ 4.25
NECTIN3-201ENST00000319792 LTN1O94822 1766 aa41.57■■■■■ 4.25
NECTIN3-201ENST00000319792 U2AF1L5P0DN76 240 aaPredicted RBP41.56■■■■■ 4.24
NECTIN3-201ENST00000319792 U2AF1Q01081 240 aaKnown RBP eCLIP41.56■■■■■ 4.24
NECTIN3-201ENST00000319792 PHRF1Q9P1Y6 1649 aaKnown RBP41.55■■■■■ 4.24
NECTIN3-201ENST00000319792 USP19O94966 1318 aa41.55■■■■■ 4.24
NECTIN3-201ENST00000319792 IL13P35225 146 aa41.54■■■■■ 4.24
NECTIN3-201ENST00000319792 CCDC146Q8IYE0 955 aa41.54■■■■■ 4.24
NECTIN3-201ENST00000319792 NHSL1Q5SYE7 1610 aa41.54■■■■■ 4.24
NECTIN3-201ENST00000319792 FLT4P35916 1363 aa41.54■■■■■ 4.24
NECTIN3-201ENST00000319792 IQSEC2Q5JU85 1478 aa41.53■■■■■ 4.24
NECTIN3-201ENST00000319792 TNS3Q68CZ2 1445 aa41.53■■■■■ 4.24
NECTIN3-201ENST00000319792 SOX12O15370 315 aa41.52■■■■■ 4.24
NECTIN3-201ENST00000319792 RUNDC1Q96C34 613 aa41.52■■■■■ 4.24
NECTIN3-201ENST00000319792 U2SURPO15042 1029 aaKnown RBP41.51■■■■■ 4.24
NECTIN3-201ENST00000319792 DDX17Q92841 729 aaKnown RBP41.51■■■■■ 4.24
NECTIN3-201ENST00000319792 KCNH5Q8NCM2 988 aa41.5■■■■■ 4.23
NECTIN3-201ENST00000319792 SENP3-EIF4A1A0A087X0R7 540 aa41.49■■■■■ 4.23
NECTIN3-201ENST00000319792 NGEFQ8N5V2 710 aa41.49■■■■■ 4.23
NECTIN3-201ENST00000319792 RGPD1P0DJD0 1748 aa41.49■■■■■ 4.23
NECTIN3-201ENST00000319792 RTL1A6NKG5 1358 aa41.48■■■■■ 4.23
NECTIN3-201ENST00000319792 CRYBG1Q9Y4K1 1723 aa41.47■■■■■ 4.23
NECTIN3-201ENST00000319792 MED1Q15648 1581 aaPredicted RBP41.46■■■■■ 4.23
NECTIN3-201ENST00000319792 APAF1O14727 1248 aa41.45■■■■■ 4.23
NECTIN3-201ENST00000319792 SOS2Q07890 1332 aaPredicted RBP41.45■■■■■ 4.23
NECTIN3-201ENST00000319792 SPATA31A3Q5VYP0 1347 aa41.44■■■■■ 4.22
NECTIN3-201ENST00000319792 PDE3BQ13370 1112 aa41.43■■■■■ 4.22
NECTIN3-201ENST00000319792 EIF4A2Q14240 407 aaKnown RBP41.43■■■■■ 4.22
NECTIN3-201ENST00000319792 HSP90AB2PQ58FF8 381 aa41.43■■■■■ 4.22
NECTIN3-201ENST00000319792 AEBP2Q6ZN18 517 aaPredicted RBP41.43■■■■■ 4.22
NECTIN3-201ENST00000319792 ARHGEF10O15013 1369 aa41.42■■■■■ 4.22
NECTIN3-201ENST00000319792 AMPHP49418 695 aa41.42■■■■■ 4.22
NECTIN3-201ENST00000319792 LMOD2Q6P5Q4 547 aa41.42■■■■■ 4.22
NECTIN3-201ENST00000319792 PLEKHF1Q96S99 279 aa41.42■■■■■ 4.22
NECTIN3-201ENST00000319792 FCHSD2O94868 740 aa41.41■■■■■ 4.22
NECTIN3-201ENST00000319792 PNNQ9H307 717 aaKnown RBP41.41■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms