RNA–Protein interactions for RNA: ENST00000318709.8

AVL9-201, Transcript of AVL9 cell migration associated, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AVL9, Length 6,982 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AVL9-201ENST00000318709 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
AVL9-201ENST00000318709 SMARCE1Q969G3 411 aa18.46■□□□□ 0.55
AVL9-201ENST00000318709 PSMA5P28066 241 aa18.46■□□□□ 0.55
AVL9-201ENST00000318709 MYO6Q9UM54 1294 aa18.46■□□□□ 0.55
AVL9-201ENST00000318709 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
AVL9-201ENST00000318709 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.54
AVL9-201ENST00000318709 CT47B1P0C2W7 299 aaPredicted RBP18.46■□□□□ 0.54
AVL9-201ENST00000318709 KINO60870 393 aaKnown RBP18.45■□□□□ 0.54
AVL9-201ENST00000318709 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
AVL9-201ENST00000318709 MATR3P43243 847 aaKnown RBP eCLIP18.45■□□□□ 0.54
AVL9-201ENST00000318709 FILIP1LQ4L180 1135 aa18.45■□□□□ 0.54
AVL9-201ENST00000318709 STRN4Q9NRL3 753 aa18.45■□□□□ 0.54
AVL9-201ENST00000318709 NEK4P51957 841 aa18.45■□□□□ 0.54
AVL9-201ENST00000318709 LEKR1Q6ZMV7 388 aa18.45■□□□□ 0.54
AVL9-201ENST00000318709 KIF6Q6ZMV9 814 aa18.45■□□□□ 0.54
AVL9-201ENST00000318709 CNNM1Q9NRU3 951 aa18.44■□□□□ 0.54
AVL9-201ENST00000318709 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
AVL9-201ENST00000318709 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
AVL9-201ENST00000318709 PDCL3Q9H2J4 239 aa18.44■□□□□ 0.54
AVL9-201ENST00000318709 RBM5P52756 815 aaKnown RBP eCLIP18.44■□□□□ 0.54
AVL9-201ENST00000318709 DEF6Q9H4E7 631 aa18.44■□□□□ 0.54
AVL9-201ENST00000318709 NUP133Q8WUM0 1156 aa18.43■□□□□ 0.54
AVL9-201ENST00000318709 ERCC4Q92889 916 aaPredicted RBP18.43■□□□□ 0.54
AVL9-201ENST00000318709 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
AVL9-201ENST00000318709 ATF3P18847 181 aa18.43■□□□□ 0.54
AVL9-201ENST00000318709 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
AVL9-201ENST00000318709 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
AVL9-201ENST00000318709 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
AVL9-201ENST00000318709 CCDC181Q5TID7 509 aa18.42■□□□□ 0.54
AVL9-201ENST00000318709 HSP90AB4PQ58FF6 505 aa18.41■□□□□ 0.54
AVL9-201ENST00000318709 ERICH4A6NGS2 130 aa18.41■□□□□ 0.54
AVL9-201ENST00000318709 GNAI1P63096 354 aa18.41■□□□□ 0.54
AVL9-201ENST00000318709 MYL6BP14649 208 aa18.41■□□□□ 0.54
AVL9-201ENST00000318709 STK38Q15208 465 aa18.41■□□□□ 0.54
AVL9-201ENST00000318709 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
AVL9-201ENST00000318709 TXLNAP40222 546 aa18.4■□□□□ 0.54
AVL9-201ENST00000318709 CCDC97Q96F63 343 aaPredicted RBP18.39■□□□□ 0.54
AVL9-201ENST00000318709 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
AVL9-201ENST00000318709 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.53
AVL9-201ENST00000318709 MRE11P49959 708 aa18.39■□□□□ 0.53
AVL9-201ENST00000318709 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
AVL9-201ENST00000318709 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
AVL9-201ENST00000318709 FANCIQ9NVI1 1328 aa18.38■□□□□ 0.53
AVL9-201ENST00000318709 TAF3Q5VWG9 929 aa18.38■□□□□ 0.53
AVL9-201ENST00000318709 GOLGA6L10A6NI86 522 aa18.38■□□□□ 0.53
AVL9-201ENST00000318709 SSR1P43307 286 aaKnown RBP18.37■□□□□ 0.53
AVL9-201ENST00000318709 SSBP05455 408 aaKnown RBP eCLIP18.37■□□□□ 0.53
AVL9-201ENST00000318709 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
AVL9-201ENST00000318709 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
AVL9-201ENST00000318709 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
AVL9-201ENST00000318709 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
AVL9-201ENST00000318709 TMX1Q9H3N1 280 aa18.37■□□□□ 0.53
AVL9-201ENST00000318709 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
AVL9-201ENST00000318709 ERLIN2O94905 339 aa18.37■□□□□ 0.53
AVL9-201ENST00000318709 LETM1O95202 739 aaPredicted RBP18.36■□□□□ 0.53
AVL9-201ENST00000318709 ME1P48163 572 aa18.36■□□□□ 0.53
AVL9-201ENST00000318709 PPFIBP1Q86W92 1011 aa18.36■□□□□ 0.53
AVL9-201ENST00000318709 TNMDQ9H2S6 317 aa18.36■□□□□ 0.53
AVL9-201ENST00000318709 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
AVL9-201ENST00000318709 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
AVL9-201ENST00000318709 CLASRPQ8N2M8 674 aaKnown RBP18.36■□□□□ 0.53
AVL9-201ENST00000318709 ZNF396Q96N95 335 aaPredicted RBP18.36■□□□□ 0.53
AVL9-201ENST00000318709 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
AVL9-201ENST00000318709 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
AVL9-201ENST00000318709 ZNHIT6Q9NWK9 470 aaKnown RBP18.35■□□□□ 0.53
AVL9-201ENST00000318709 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
AVL9-201ENST00000318709 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
AVL9-201ENST00000318709 ZRSR2Q15696 482 aaKnown RBP18.35■□□□□ 0.53
AVL9-201ENST00000318709 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
AVL9-201ENST00000318709 NLRP6P59044 892 aa18.34■□□□□ 0.53
AVL9-201ENST00000318709 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
AVL9-201ENST00000318709 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
AVL9-201ENST00000318709 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
AVL9-201ENST00000318709 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.53
AVL9-201ENST00000318709 KIAA0754O94854 1291 aa18.33■□□□□ 0.53
AVL9-201ENST00000318709 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.53
AVL9-201ENST00000318709 UQCRHLA0A096LP55 91 aa18.33■□□□□ 0.52
AVL9-201ENST00000318709 UQCRHP07919 91 aa18.33■□□□□ 0.52
AVL9-201ENST00000318709 PPM1FP49593 454 aaPredicted RBP18.33■□□□□ 0.52
AVL9-201ENST00000318709 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
AVL9-201ENST00000318709 USP5P45974 858 aa18.32■□□□□ 0.52
AVL9-201ENST00000318709 MTHFSP49914 203 aa18.32■□□□□ 0.52
AVL9-201ENST00000318709 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
AVL9-201ENST00000318709 NEBLO76041 1014 aa18.31■□□□□ 0.52
AVL9-201ENST00000318709 CAMK4Q16566 473 aa18.31■□□□□ 0.52
AVL9-201ENST00000318709 BICDL1Q6ZP65 573 aa18.31■□□□□ 0.52
AVL9-201ENST00000318709 CCDC66A2RUB6 948 aa18.31■□□□□ 0.52
AVL9-201ENST00000318709 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
AVL9-201ENST00000318709 BCAR3O75815 825 aa18.3■□□□□ 0.52
AVL9-201ENST00000318709 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
AVL9-201ENST00000318709 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
AVL9-201ENST00000318709 GBP2P32456 591 aaPredicted RBP18.29■□□□□ 0.52
AVL9-201ENST00000318709 CCDC102AQ96A19 550 aa18.29■□□□□ 0.52
AVL9-201ENST00000318709 CCP110O43303 1012 aa18.28■□□□□ 0.52
AVL9-201ENST00000318709 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
AVL9-201ENST00000318709 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
AVL9-201ENST00000318709 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
AVL9-201ENST00000318709 CYP46A1Q9Y6A2 500 aa18.28■□□□□ 0.52
AVL9-201ENST00000318709 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
AVL9-201ENST00000318709 WIZO95785 1651 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms