RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 PIAS4Q8N2W9 510 aaPredicted RBP8.4□□□□□ -1.06
EXD1-201ENST00000314992 PPP1R1BQ9UD71 204 aaPredicted RBP8.4□□□□□ -1.06
EXD1-201ENST00000314992 QSER1Q2KHR3 1735 aa8.4□□□□□ -1.06
EXD1-201ENST00000314992 APLP1P51693 650 aa8.39□□□□□ -1.07
EXD1-201ENST00000314992 POTEDQ86YR6 584 aa8.39□□□□□ -1.07
EXD1-201ENST00000314992 PEAK1Q9H792 1746 aa8.39□□□□□ -1.07
EXD1-201ENST00000314992 ZBED9Q6R2W3 1325 aa8.39□□□□□ -1.07
EXD1-201ENST00000314992 ZNF644Q9H582 1327 aaPredicted RBP8.38□□□□□ -1.07
EXD1-201ENST00000314992 AMOTL2Q9Y2J4 779 aa8.38□□□□□ -1.07
EXD1-201ENST00000314992 COL13A1Q5TAT6 717 aaPredicted RBP8.37□□□□□ -1.07
EXD1-201ENST00000314992 PRKRIP1Q9H875 184 aaPredicted RBP8.37□□□□□ -1.07
EXD1-201ENST00000314992 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
EXD1-201ENST00000314992 L3MBTL2Q969R5 705 aa8.37□□□□□ -1.07
EXD1-201ENST00000314992 CRYBG1Q9Y4K1 1723 aa8.36□□□□□ -1.07
EXD1-201ENST00000314992 SYT17Q9BSW7 474 aa8.36□□□□□ -1.07
EXD1-201ENST00000314992 HIRIP3Q9BW71 556 aaPredicted RBP8.36□□□□□ -1.07
EXD1-201ENST00000314992 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
EXD1-201ENST00000314992 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
EXD1-201ENST00000314992 ANO8Q9HCE9 1232 aaPredicted RBP8.36□□□□□ -1.07
EXD1-201ENST00000314992 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
EXD1-201ENST00000314992 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
EXD1-201ENST00000314992 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
EXD1-201ENST00000314992 C14orf37Q86TY3 774 aa8.35□□□□□ -1.07
EXD1-201ENST00000314992 TNS4Q8IZW8 715 aa8.35□□□□□ -1.07
EXD1-201ENST00000314992 HNRNPUQ00839 825 aaKnown RBP eCLIP8.35□□□□□ -1.07
EXD1-201ENST00000314992 FAM196AQ6ZSG2 479 aa8.35□□□□□ -1.07
EXD1-201ENST00000314992 DDX17Q92841 729 aaKnown RBP8.35□□□□□ -1.07
EXD1-201ENST00000314992 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
EXD1-201ENST00000314992 SMG6Q86US8 1419 aaKnown RBP8.35□□□□□ -1.07
EXD1-201ENST00000314992 BCANQ96GW7 911 aa8.34□□□□□ -1.07
EXD1-201ENST00000314992 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
EXD1-201ENST00000314992 TNS2Q63HR2 1409 aa8.34□□□□□ -1.07
EXD1-201ENST00000314992 ARHGEF28Q8N1W1 1705 aaKnown RBP8.34□□□□□ -1.07
EXD1-201ENST00000314992 PAPPAQ13219 1627 aa8.33□□□□□ -1.08
EXD1-201ENST00000314992 BCL9O00512 1426 aa8.33□□□□□ -1.08
EXD1-201ENST00000314992 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
EXD1-201ENST00000314992 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
EXD1-201ENST00000314992 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
EXD1-201ENST00000314992 PARP4Q9UKK3 1724 aaKnown RBP8.33□□□□□ -1.08
EXD1-201ENST00000314992 KANK1Q14678 1352 aa8.33□□□□□ -1.08
EXD1-201ENST00000314992 SPATA31A3Q5VYP0 1347 aa8.33□□□□□ -1.08
EXD1-201ENST00000314992 CICQ96RK0 1608 aaPredicted RBP8.32□□□□□ -1.08
EXD1-201ENST00000314992 KIF7Q2M1P5 1343 aa8.32□□□□□ -1.08
EXD1-201ENST00000314992 SPATA31A5Q5VU36 1347 aa8.32□□□□□ -1.08
EXD1-201ENST00000314992 SPATA31A7Q8IWB4 1347 aa8.32□□□□□ -1.08
EXD1-201ENST00000314992 SBF2Q86WG5 1849 aa8.31□□□□□ -1.08
EXD1-201ENST00000314992 SBNO1A3KN83 1393 aa8.31□□□□□ -1.08
EXD1-201ENST00000314992 INSRP06213 1382 aa8.31□□□□□ -1.08
EXD1-201ENST00000314992 PLSCR1O15162 318 aa8.3□□□□□ -1.08
EXD1-201ENST00000314992 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
EXD1-201ENST00000314992 FMN2Q9NZ56 1722 aa8.3□□□□□ -1.08
EXD1-201ENST00000314992 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
EXD1-201ENST00000314992 TNS3Q68CZ2 1445 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 TSPY4P0CV99 314 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 TSPY10P0CW01 314 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 RGS19P49795 217 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 CHIC2Q9UKJ5 165 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 TULP4Q9NRJ4 1543 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 KLRG1Q96E93 195 aa8.29□□□□□ -1.08
EXD1-201ENST00000314992 ANKRD30AQ9BXX3 1397 aa8.28□□□□□ -1.08
EXD1-201ENST00000314992 TRPM3Q9HCF6 1732 aaPredicted RBP8.28□□□□□ -1.08
EXD1-201ENST00000314992 C10orf71Q711Q0 1435 aa8.28□□□□□ -1.08
EXD1-201ENST00000314992 E9PCH4 1651 aa8.28□□□□□ -1.08
EXD1-201ENST00000314992 ALS2Q96Q42 1657 aa8.28□□□□□ -1.08
EXD1-201ENST00000314992 METP08581 1390 aa8.27□□□□□ -1.08
EXD1-201ENST00000314992 CCDC184Q52MB2 194 aa8.27□□□□□ -1.09
EXD1-201ENST00000314992 MTFR1LQ9H019 292 aa8.27□□□□□ -1.09
EXD1-201ENST00000314992 ORAI2Q96SN7 254 aa8.27□□□□□ -1.09
EXD1-201ENST00000314992 SLC4A1APQ9BWU0 796 aaKnown RBP8.27□□□□□ -1.09
EXD1-201ENST00000314992 MRS2Q9HD23 443 aa8.27□□□□□ -1.09
EXD1-201ENST00000314992 APBA3O96018 575 aa8.26□□□□□ -1.09
EXD1-201ENST00000314992 ATP7BP35670 1465 aa8.26□□□□□ -1.09
EXD1-201ENST00000314992 USP47Q96K76 1375 aa8.26□□□□□ -1.09
EXD1-201ENST00000314992 NUDCQ9Y266 331 aa8.26□□□□□ -1.09
EXD1-201ENST00000314992 KNDC1Q76NI1 1749 aa8.25□□□□□ -1.09
EXD1-201ENST00000314992 KIF3CO14782 793 aa8.25□□□□□ -1.09
EXD1-201ENST00000314992 GRIN3BO60391 1043 aa8.25□□□□□ -1.09
EXD1-201ENST00000314992 BARGINQ6ZT62 677 aa8.25□□□□□ -1.09
EXD1-201ENST00000314992 BRD4O60885 1362 aaPredicted RBP8.25□□□□□ -1.09
EXD1-201ENST00000314992 ARHGEF10O15013 1369 aa8.25□□□□□ -1.09
EXD1-201ENST00000314992 ANKRD50Q9ULJ7 1429 aa8.24□□□□□ -1.09
EXD1-201ENST00000314992 WWC3Q9ULE0 1092 aa8.24□□□□□ -1.09
EXD1-201ENST00000314992 KIF15Q9NS87 1388 aa8.24□□□□□ -1.09
EXD1-201ENST00000314992 TECPR2O15040 1411 aa8.23□□□□□ -1.09
EXD1-201ENST00000314992 CAPN15O75808 1086 aa8.23□□□□□ -1.09
EXD1-201ENST00000314992 TRIM37O94972 964 aa8.23□□□□□ -1.09
EXD1-201ENST00000314992 PNISRQ8TF01 805 aaKnown RBP8.23□□□□□ -1.09
EXD1-201ENST00000314992 CCDC136Q96JN2 1154 aa8.23□□□□□ -1.09
EXD1-201ENST00000314992 RALBP1Q15311 655 aa8.23□□□□□ -1.09
EXD1-201ENST00000314992 SALL2Q9Y467 1007 aaPredicted RBP8.23□□□□□ -1.09
EXD1-201ENST00000314992 GPRASP1Q5JY77 1395 aa8.22□□□□□ -1.09
EXD1-201ENST00000314992 SPATA31A1Q5TZJ5 1347 aa8.22□□□□□ -1.09
EXD1-201ENST00000314992 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
EXD1-201ENST00000314992 NRXN1Q9ULB1 1477 aa8.22□□□□□ -1.09
EXD1-201ENST00000314992 ROBO2Q9HCK4 1378 aa8.21□□□□□ -1.09
EXD1-201ENST00000314992 WNK3Q9BYP7 1800 aa8.21□□□□□ -1.09
EXD1-201ENST00000314992 ARXQ96QS3 562 aa8.21□□□□□ -1.09
EXD1-201ENST00000314992 TOPAZ1Q8N9V7 1692 aa8.21□□□□□ -1.1
EXD1-201ENST00000314992 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
EXD1-201ENST00000314992 FAM9BQ8IZU0 186 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms