RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 NRAPQ86VF7 1730 aa26.17■■□□□ 1.78
RPA2-201ENST00000313433 NWD2Q9ULI1 1742 aa26.17■■□□□ 1.78
RPA2-201ENST00000313433 PLEKHG5O94827 1062 aa26.17■■□□□ 1.78
RPA2-201ENST00000313433 SRPK2P78362 688 aaKnown RBP26.17■■□□□ 1.78
RPA2-201ENST00000313433 LMOD2Q6P5Q4 547 aa26.17■■□□□ 1.78
RPA2-201ENST00000313433 AKAP12Q02952 1782 aa26.16■■□□□ 1.78
RPA2-201ENST00000313433 RXRBP28702 533 aa26.16■■□□□ 1.78
RPA2-201ENST00000313433 CARD11Q9BXL7 1154 aa26.15■■□□□ 1.78
RPA2-201ENST00000313433 SBNO2Q9Y2G9 1366 aa26.15■■□□□ 1.78
RPA2-201ENST00000313433 CLSPNQ9HAW4 1339 aa26.14■■□□□ 1.77
RPA2-201ENST00000313433 GLI3P10071 1580 aa26.13■■□□□ 1.77
RPA2-201ENST00000313433 EVC2Q86UK5 1308 aa26.12■■□□□ 1.77
RPA2-201ENST00000313433 NRKQ7Z2Y5 1582 aa26.12■■□□□ 1.77
RPA2-201ENST00000313433 COL14A1Q05707 1796 aaKnown RBP26.11■■□□□ 1.77
RPA2-201ENST00000313433 RBM6P78332 1123 aaKnown RBP26.11■■□□□ 1.77
RPA2-201ENST00000313433 PAK3O75914 559 aaPredicted RBP26.1■■□□□ 1.77
RPA2-201ENST00000313433 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
RPA2-201ENST00000313433 PIK3C2AO00443 1686 aa26.09■■□□□ 1.77
RPA2-201ENST00000313433 SSH2Q76I76 1423 aa26.09■■□□□ 1.77
RPA2-201ENST00000313433 CABP1Q9NZU7 370 aa26.09■■□□□ 1.77
RPA2-201ENST00000313433 TRPC5Q9UL62 973 aaPredicted RBP26.09■■□□□ 1.77
RPA2-201ENST00000313433 USP6P35125 1406 aa26.08■■□□□ 1.77
RPA2-201ENST00000313433 FAM83GA6ND36 823 aa26.07■■□□□ 1.76
RPA2-201ENST00000313433 MON2Q7Z3U7 1717 aa26.07■■□□□ 1.76
RPA2-201ENST00000313433 HAP1P54257 671 aaPredicted RBP26.05■■□□□ 1.76
RPA2-201ENST00000313433 NUTM2GQ5VZR2 741 aa26.05■■□□□ 1.76
RPA2-201ENST00000313433 UNC5CLQ8IV45 518 aa26.05■■□□□ 1.76
RPA2-201ENST00000313433 CD163L1Q9NR16 1453 aa26.03■■□□□ 1.76
RPA2-201ENST00000313433 TESK2Q96S53 571 aa26.02■■□□□ 1.76
RPA2-201ENST00000313433 USP19O94966 1318 aa26.02■■□□□ 1.76
RPA2-201ENST00000313433 CPSF1Q10570 1443 aaKnown RBP26.02■■□□□ 1.76
RPA2-201ENST00000313433 ATAD2Q6PL18 1390 aa26.01■■□□□ 1.75
RPA2-201ENST00000313433 BRWD3Q6RI45 1802 aa26.01■■□□□ 1.75
RPA2-201ENST00000313433 LMO7Q8WWI1 1683 aa26■■□□□ 1.75
RPA2-201ENST00000313433 GJD4Q96KN9 370 aaPredicted RBP26■■□□□ 1.75
RPA2-201ENST00000313433 SLIT3O75094 1523 aa25.99■■□□□ 1.75
RPA2-201ENST00000313433 KIAA0232Q92628 1395 aa25.99■■□□□ 1.75
RPA2-201ENST00000313433 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
RPA2-201ENST00000313433 TIMELESSQ9UNS1 1208 aa25.98■■□□□ 1.75
RPA2-201ENST00000313433 ST20-MTHFSA0A0A6YYL1 179 aa25.97■■□□□ 1.75
RPA2-201ENST00000313433 ABTB2Q8N961 1025 aa25.97■■□□□ 1.75
RPA2-201ENST00000313433 VPS72Q15906 364 aa25.96■■□□□ 1.75
RPA2-201ENST00000313433 UPF1Q92900 1129 aaKnown RBP eCLIP25.95■■□□□ 1.74
RPA2-201ENST00000313433 BTG4Q9NY30 223 aa25.95■■□□□ 1.74
RPA2-201ENST00000313433 USP54Q70EL1 1684 aa25.95■■□□□ 1.74
RPA2-201ENST00000313433 EP400Q96L91 3159 aa25.95■■□□□ 1.74
RPA2-201ENST00000313433 USP47Q96K76 1375 aa25.95■■□□□ 1.74
RPA2-201ENST00000313433 CHRNA2Q15822 529 aa25.93■■□□□ 1.74
RPA2-201ENST00000313433 ZC3H6P61129 1189 aaKnown RBP25.92■■□□□ 1.74
RPA2-201ENST00000313433 PRDM11Q9NQV5 511 aa25.92■■□□□ 1.74
RPA2-201ENST00000313433 CAMTA1Q9Y6Y1 1673 aa25.92■■□□□ 1.74
RPA2-201ENST00000313433 COL18A1P39060 1754 aa25.92■■□□□ 1.74
RPA2-201ENST00000313433 TTC21BQ7Z4L5 1316 aa25.91■■□□□ 1.74
RPA2-201ENST00000313433 CPDO75976 1380 aa25.91■■□□□ 1.74
RPA2-201ENST00000313433 KTN1Q86UP2 1357 aaKnown RBP25.9■■□□□ 1.74
RPA2-201ENST00000313433 THSD7AQ9UPZ6 1657 aa25.89■■□□□ 1.73
RPA2-201ENST00000313433 SLC12A5Q9H2X9 1139 aa25.88■■□□□ 1.73
RPA2-201ENST00000313433 NFAT5O94916 1531 aa25.88■■□□□ 1.73
RPA2-201ENST00000313433 GCP02774 474 aa25.87■■□□□ 1.73
RPA2-201ENST00000313433 NLRP13Q86W25 1043 aa25.87■■□□□ 1.73
RPA2-201ENST00000313433 ZNF692Q9BU19 519 aaPredicted RBP25.87■■□□□ 1.73
RPA2-201ENST00000313433 A0A1W2PP64 1363 aa25.86■■□□□ 1.73
RPA2-201ENST00000313433 NLRP6P59044 892 aa25.86■■□□□ 1.73
RPA2-201ENST00000313433 PUS7Q96PZ0 661 aaKnown RBP25.86■■□□□ 1.73
RPA2-201ENST00000313433 MYOM1P52179 1685 aa25.86■■□□□ 1.73
RPA2-201ENST00000313433 ONECUT3O60422 494 aaPredicted RBP25.85■■□□□ 1.73
RPA2-201ENST00000313433 SPATA31A5Q5VU36 1347 aa25.85■■□□□ 1.73
RPA2-201ENST00000313433 SPATA31A7Q8IWB4 1347 aa25.85■■□□□ 1.73
RPA2-201ENST00000313433 RGPD5Q99666 1765 aa25.84■■□□□ 1.73
RPA2-201ENST00000313433 TTC21AQ8NDW8 1320 aa25.84■■□□□ 1.73
RPA2-201ENST00000313433 ZRANB1Q9UGI0 708 aa25.83■■□□□ 1.73
RPA2-201ENST00000313433 CCDC9Q9Y3X0 531 aaKnown RBP25.83■■□□□ 1.73
RPA2-201ENST00000313433 TMC1Q8TDI8 760 aa25.82■■□□□ 1.72
RPA2-201ENST00000313433 COL5A2P05997 1499 aaPredicted RBP25.81■■□□□ 1.72
RPA2-201ENST00000313433 SEPT12Q8IYM1 358 aa25.81■■□□□ 1.72
RPA2-201ENST00000313433 EDC4Q6P2E9 1401 aaKnown RBP25.8■■□□□ 1.72
RPA2-201ENST00000313433 USP31Q70CQ4 1352 aa25.79■■□□□ 1.72
RPA2-201ENST00000313433 LTN1O94822 1766 aa25.78■■□□□ 1.72
RPA2-201ENST00000313433 FAM98CQ17RN3 349 aaKnown RBP25.78■■□□□ 1.72
RPA2-201ENST00000313433 NME9Q86XW9 330 aa25.78■■□□□ 1.72
RPA2-201ENST00000313433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.78■■□□□ 1.72
RPA2-201ENST00000313433 SPATA31A1Q5TZJ5 1347 aa25.78■■□□□ 1.72
RPA2-201ENST00000313433 STRN4Q9NRL3 753 aa25.77■■□□□ 1.72
RPA2-201ENST00000313433 NINLQ9Y2I6 1382 aa25.77■■□□□ 1.72
RPA2-201ENST00000313433 AATKQ6ZMQ8 1374 aa25.76■■□□□ 1.71
RPA2-201ENST00000313433 WNK3Q9BYP7 1800 aa25.75■■□□□ 1.71
RPA2-201ENST00000313433 OVOS2A0A0J9YW53 1432 aa25.75■■□□□ 1.71
RPA2-201ENST00000313433 OVOS2Q6IE36 1432 aa25.75■■□□□ 1.71
RPA2-201ENST00000313433 LARP1Q6PKG0 1096 aaKnown RBP25.75■■□□□ 1.71
RPA2-201ENST00000313433 HDGFL2Q7Z4V5 671 aaPredicted RBP25.74■■□□□ 1.71
RPA2-201ENST00000313433 TMF1P82094 1093 aa25.73■■□□□ 1.71
RPA2-201ENST00000313433 ARHGEF25Q86VW2 580 aa25.73■■□□□ 1.71
RPA2-201ENST00000313433 AXIN2Q9Y2T1 843 aa25.73■■□□□ 1.71
RPA2-201ENST00000313433 ANKRD36BQ8N2N9 1353 aa25.72■■□□□ 1.71
RPA2-201ENST00000313433 TERF2IPQ9NYB0 399 aa25.72■■□□□ 1.71
RPA2-201ENST00000313433 SOX12O15370 315 aa25.71■■□□□ 1.71
RPA2-201ENST00000313433 ABCC6O95255 1503 aa25.71■■□□□ 1.71
RPA2-201ENST00000313433 ZBTB7CA1YPR0 619 aa25.7■■□□□ 1.7
RPA2-201ENST00000313433 PARP4Q9UKK3 1724 aaKnown RBP25.7■■□□□ 1.7
RPA2-201ENST00000313433 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms