RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 TCOF1Q13428 1488 aaKnown RBP10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 PRKRIP1Q9H875 184 aaPredicted RBP10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 NOP58Q9Y2X3 529 aaKnown RBP10.17□□□□□ -0.78
PCDHB1-201ENST00000306549 TSPYL4Q9UJ04 414 aa10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 R3HCC1Q9Y3T6 440 aaKnown RBP10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 TMEM132EQ6IEE7 984 aa10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 DISP1Q96F81 1524 aa10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 TTC21BQ7Z4L5 1316 aa10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 MFAP1P55081 439 aaKnown RBP10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 SLC26A8Q96RN1 970 aa10.16□□□□□ -0.78
PCDHB1-201ENST00000306549 CDC42BPAQ5VT25 1732 aa10.15□□□□□ -0.78
PCDHB1-201ENST00000306549 ARHGEF12Q9NZN5 1544 aa10.15□□□□□ -0.78
PCDHB1-201ENST00000306549 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
PCDHB1-201ENST00000306549 TTC21AQ8NDW8 1320 aa10.15□□□□□ -0.78
PCDHB1-201ENST00000306549 TCERG1O14776 1098 aaKnown RBP10.15□□□□□ -0.78
PCDHB1-201ENST00000306549 ABCA8O94911 1581 aa10.15□□□□□ -0.78
PCDHB1-201ENST00000306549 TRPM2O94759 1503 aa10.15□□□□□ -0.79
PCDHB1-201ENST00000306549 ARAP3Q8WWN8 1544 aa10.15□□□□□ -0.79
PCDHB1-201ENST00000306549 STARD3NLO95772 234 aa10.14□□□□□ -0.79
PCDHB1-201ENST00000306549 NUDT16Q96DE0 195 aaKnown RBP10.14□□□□□ -0.79
PCDHB1-201ENST00000306549 ERC2O15083 957 aa10.14□□□□□ -0.79
PCDHB1-201ENST00000306549 G3BP1Q13283 466 aaKnown RBP eCLIP10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 GNL3LQ9NVN8 582 aaKnown RBP10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 IPO7O95373 1038 aaKnown RBP10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 ANKRD20A12PQ8NF67 263 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 IDI1Q13907 227 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 AMOTL2Q9Y2J4 779 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 KDM6BO15054 1643 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 RAD21O60216 631 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 CABP4P57796 275 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 RIC3Q7Z5B4 369 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 H3BQV1 296 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 GNAI3P08754 354 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 IFFO2Q5TF58 517 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 WWC2Q6AWC2 1192 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 ERC1Q8IUD2 1116 aa10.13□□□□□ -0.79
PCDHB1-201ENST00000306549 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 RNF20Q5VTR2 975 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 PIP4K2BP78356 416 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 TEX13AQ9BXU3 409 aaPredicted RBP10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 ST18O60284 1047 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 RIMS2Q9UQ26 1411 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 REC8O95072 547 aa10.12□□□□□ -0.79
PCDHB1-201ENST00000306549 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 FKBP5Q13451 457 aaPredicted RBP10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 TRIM29Q14134 588 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 MTHFSP49914 203 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 FAM184AQ8NB25 1140 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 GPS2Q13227 327 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 HOOK1Q9UJC3 728 aaKnown RBP10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 FCHSD2O94868 740 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 ODF2Q5BJF6 829 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 ATP6V1DQ9Y5K8 247 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 KIF7Q2M1P5 1343 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
PCDHB1-201ENST00000306549 HIP1O00291 1037 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 TRDNQ13061 729 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 KLHL34Q8N239 644 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 ZMYM3Q14202 1370 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 ADGRL2O95490 1459 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 ABCC11Q96J66 1382 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 KDM5DQ9BY66 1539 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 DHX16O60231 1041 aaKnown RBP10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
PCDHB1-201ENST00000306549 KDM5AP29375 1690 aaKnown RBP10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 NGLY1Q96IV0 654 aa10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 CCAR1Q8IX12 1150 aaKnown RBP10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 NKTRP30414 1462 aaKnown RBP10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 IFIT2P09913 472 aaKnown RBP10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 B4GALNT3Q6L9W6 998 aa10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 ZKSCAN1P17029 563 aaPredicted RBP10.09□□□□□ -0.79
PCDHB1-201ENST00000306549 PLXNC1O60486 1568 aa10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 EIF2S2P20042 333 aaKnown RBP10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 GOLGA6L19H0YKK7 550 aa10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 WDR63Q8IWG1 891 aa10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 CT47A1Q5JQC4 288 aaPredicted RBP10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 DIAPH3Q9NSV4 1193 aa10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 CCT4P50991 539 aaKnown RBP10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 ZNF530Q6P9A1 599 aaPredicted RBP10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 GGNBP2Q9H3C7 697 aa10.08□□□□□ -0.8
PCDHB1-201ENST00000306549 WDHD1O75717 1129 aaPredicted RBP10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 PAF1Q8N7H5 531 aa10.07□□□□□ -0.8
PCDHB1-201ENST00000306549 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms