RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
TTC17-202ENST00000299240 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
TTC17-202ENST00000299240 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
TTC17-202ENST00000299240 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
TTC17-202ENST00000299240 TNNQ9UQP3 1299 aa16.43■□□□□ 0.22
TTC17-202ENST00000299240 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
TTC17-202ENST00000299240 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
TTC17-202ENST00000299240 PPLO60437 1756 aa16.41■□□□□ 0.22
TTC17-202ENST00000299240 A0A0G2JS52 829 aa16.41■□□□□ 0.22
TTC17-202ENST00000299240 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
TTC17-202ENST00000299240 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
TTC17-202ENST00000299240 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
TTC17-202ENST00000299240 ZFYVE9O95405 1425 aa16.4■□□□□ 0.22
TTC17-202ENST00000299240 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
TTC17-202ENST00000299240 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
TTC17-202ENST00000299240 ADAMTS13Q76LX8 1427 aa16.4■□□□□ 0.22
TTC17-202ENST00000299240 KDM5AP29375 1690 aaKnown RBP16.4■□□□□ 0.22
TTC17-202ENST00000299240 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
TTC17-202ENST00000299240 ATF3P18847 181 aa16.39■□□□□ 0.21
TTC17-202ENST00000299240 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
TTC17-202ENST00000299240 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.21
TTC17-202ENST00000299240 SBNO2Q9Y2G9 1366 aa16.39■□□□□ 0.21
TTC17-202ENST00000299240 MCM10Q7L590 875 aa16.38■□□□□ 0.21
TTC17-202ENST00000299240 RGS3P49796 1198 aa16.37■□□□□ 0.21
TTC17-202ENST00000299240 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
TTC17-202ENST00000299240 USP35Q9P2H5 1018 aa16.37■□□□□ 0.21
TTC17-202ENST00000299240 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
TTC17-202ENST00000299240 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
TTC17-202ENST00000299240 PLEKHG1Q9ULL1 1385 aa16.36■□□□□ 0.21
TTC17-202ENST00000299240 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
TTC17-202ENST00000299240 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
TTC17-202ENST00000299240 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
TTC17-202ENST00000299240 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
TTC17-202ENST00000299240 TSHZ2Q9NRE2 1034 aa16.34■□□□□ 0.21
TTC17-202ENST00000299240 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
TTC17-202ENST00000299240 CSB-PGBD3P0DP91 1061 aa16.34■□□□□ 0.21
TTC17-202ENST00000299240 LRRC59Q96AG4 307 aaKnown RBP16.34■□□□□ 0.21
TTC17-202ENST00000299240 SMG6Q86US8 1419 aaKnown RBP16.34■□□□□ 0.21
TTC17-202ENST00000299240 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
TTC17-202ENST00000299240 E9PSI1 815 aa16.33■□□□□ 0.2
TTC17-202ENST00000299240 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.2
TTC17-202ENST00000299240 MAP3K19Q56UN5 1328 aa16.33■□□□□ 0.2
TTC17-202ENST00000299240 RIMS1Q86UR5 1692 aaKnown RBP16.32■□□□□ 0.2
TTC17-202ENST00000299240 ZC3H13Q5T200 1668 aaKnown RBP16.31■□□□□ 0.2
TTC17-202ENST00000299240 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
TTC17-202ENST00000299240 NLRP1Q9C000 1473 aa16.31■□□□□ 0.2
TTC17-202ENST00000299240 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
TTC17-202ENST00000299240 ZNF335Q9H4Z2 1342 aaPredicted RBP16.3■□□□□ 0.2
TTC17-202ENST00000299240 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
TTC17-202ENST00000299240 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
TTC17-202ENST00000299240 SETBP1Q9Y6X0 1596 aa16.28■□□□□ 0.2
TTC17-202ENST00000299240 POLR3AO14802 1390 aaPredicted RBP16.28■□□□□ 0.2
TTC17-202ENST00000299240 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
TTC17-202ENST00000299240 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.19
TTC17-202ENST00000299240 NLRP2Q9NX02 1062 aa16.27■□□□□ 0.19
TTC17-202ENST00000299240 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
TTC17-202ENST00000299240 ITPRIPQ8IWB1 547 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 TSPYL6Q8N831 410 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 MYH16Q9H6N6 1097 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 LAMC1P11047 1609 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
TTC17-202ENST00000299240 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
TTC17-202ENST00000299240 APBB1O00213 710 aa16.25■□□□□ 0.19
TTC17-202ENST00000299240 IL13P35225 146 aa16.25■□□□□ 0.19
TTC17-202ENST00000299240 FER1L4A9Z1Z3 1794 aa16.25■□□□□ 0.19
TTC17-202ENST00000299240 CD163L1Q9NR16 1453 aa16.25■□□□□ 0.19
TTC17-202ENST00000299240 CPS1P31327 1500 aa16.25■□□□□ 0.19
TTC17-202ENST00000299240 EYA1Q99502 592 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 STRN4Q9NRL3 753 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 TMEM94Q12767 1356 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 C3P01024 1663 aa16.24■□□□□ 0.19
TTC17-202ENST00000299240 FCHSD2O94868 740 aa16.23■□□□□ 0.19
TTC17-202ENST00000299240 PUS7Q96PZ0 661 aaKnown RBP16.23■□□□□ 0.19
TTC17-202ENST00000299240 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
TTC17-202ENST00000299240 C1orf115Q9H7X2 142 aa16.23■□□□□ 0.19
TTC17-202ENST00000299240 MYOM1P52179 1685 aa16.22■□□□□ 0.19
TTC17-202ENST00000299240 RLBP1P12271 317 aa16.22■□□□□ 0.19
TTC17-202ENST00000299240 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
TTC17-202ENST00000299240 SSH1Q8WYL5 1049 aa16.22■□□□□ 0.19
TTC17-202ENST00000299240 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
TTC17-202ENST00000299240 SLC4A10Q6U841 1118 aa16.21■□□□□ 0.19
TTC17-202ENST00000299240 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
TTC17-202ENST00000299240 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
TTC17-202ENST00000299240 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
TTC17-202ENST00000299240 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
TTC17-202ENST00000299240 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
TTC17-202ENST00000299240 KIAA1210Q9ULL0 1709 aa16.2■□□□□ 0.18
TTC17-202ENST00000299240 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
TTC17-202ENST00000299240 NOB1Q9ULX3 412 aaKnown RBP16.2■□□□□ 0.18
TTC17-202ENST00000299240 GCP02774 474 aa16.2■□□□□ 0.18
TTC17-202ENST00000299240 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
TTC17-202ENST00000299240 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
TTC17-202ENST00000299240 NINLQ9Y2I6 1382 aa16.2■□□□□ 0.18
TTC17-202ENST00000299240 ARXQ96QS3 562 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms