RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
CDK5-201ENST00000297518 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
CDK5-201ENST00000297518 FNBP4Q8N3X1 1017 aaPredicted RBP16.92■□□□□ 0.3
CDK5-201ENST00000297518 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
CDK5-201ENST00000297518 USP47Q96K76 1375 aa16.91■□□□□ 0.3
CDK5-201ENST00000297518 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
CDK5-201ENST00000297518 AKAP12Q02952 1782 aa16.9■□□□□ 0.3
CDK5-201ENST00000297518 USP6P35125 1406 aa16.9■□□□□ 0.3
CDK5-201ENST00000297518 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
CDK5-201ENST00000297518 USP21Q9UK80 565 aa16.9■□□□□ 0.3
CDK5-201ENST00000297518 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.9■□□□□ 0.3
CDK5-201ENST00000297518 PHRF1Q9P1Y6 1649 aaKnown RBP16.89■□□□□ 0.29
CDK5-201ENST00000297518 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
CDK5-201ENST00000297518 RXRBP28702 533 aa16.89■□□□□ 0.29
CDK5-201ENST00000297518 TESK2Q96S53 571 aa16.89■□□□□ 0.29
CDK5-201ENST00000297518 SLIT2O94813 1529 aa16.89■□□□□ 0.29
CDK5-201ENST00000297518 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
CDK5-201ENST00000297518 ATRNO75882 1429 aa16.87■□□□□ 0.29
CDK5-201ENST00000297518 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
CDK5-201ENST00000297518 SLC24A1O60721 1099 aa16.87■□□□□ 0.29
CDK5-201ENST00000297518 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
CDK5-201ENST00000297518 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
CDK5-201ENST00000297518 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
CDK5-201ENST00000297518 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
CDK5-201ENST00000297518 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
CDK5-201ENST00000297518 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
CDK5-201ENST00000297518 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
CDK5-201ENST00000297518 CPSF1Q10570 1443 aaKnown RBP16.86■□□□□ 0.29
CDK5-201ENST00000297518 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
CDK5-201ENST00000297518 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
CDK5-201ENST00000297518 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
CDK5-201ENST00000297518 COL14A1Q05707 1796 aaKnown RBP16.85■□□□□ 0.29
CDK5-201ENST00000297518 UNC5CLQ8IV45 518 aa16.84■□□□□ 0.29
CDK5-201ENST00000297518 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
CDK5-201ENST00000297518 PIK3C2AO00443 1686 aa16.84■□□□□ 0.29
CDK5-201ENST00000297518 USP19O94966 1318 aa16.83■□□□□ 0.28
CDK5-201ENST00000297518 TMC1Q8TDI8 760 aa16.83■□□□□ 0.28
CDK5-201ENST00000297518 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
CDK5-201ENST00000297518 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CDK5-201ENST00000297518 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
CDK5-201ENST00000297518 TMF1P82094 1093 aa16.82■□□□□ 0.28
CDK5-201ENST00000297518 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
CDK5-201ENST00000297518 RGS12O14924 1447 aa16.81■□□□□ 0.28
CDK5-201ENST00000297518 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
CDK5-201ENST00000297518 TTC21BQ7Z4L5 1316 aa16.81■□□□□ 0.28
CDK5-201ENST00000297518 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
CDK5-201ENST00000297518 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
CDK5-201ENST00000297518 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
CDK5-201ENST00000297518 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
CDK5-201ENST00000297518 SLIT3O75094 1523 aa16.8■□□□□ 0.28
CDK5-201ENST00000297518 NLRP6P59044 892 aa16.79■□□□□ 0.28
CDK5-201ENST00000297518 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
CDK5-201ENST00000297518 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
CDK5-201ENST00000297518 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
CDK5-201ENST00000297518 GLI3P10071 1580 aa16.78■□□□□ 0.28
CDK5-201ENST00000297518 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
CDK5-201ENST00000297518 VPS72Q15906 364 aa16.78■□□□□ 0.28
CDK5-201ENST00000297518 GJD4Q96KN9 370 aaPredicted RBP16.78■□□□□ 0.28
CDK5-201ENST00000297518 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
CDK5-201ENST00000297518 CPDO75976 1380 aa16.77■□□□□ 0.28
CDK5-201ENST00000297518 GCP02774 474 aa16.77■□□□□ 0.28
CDK5-201ENST00000297518 EDC4Q6P2E9 1401 aaKnown RBP16.77■□□□□ 0.27
CDK5-201ENST00000297518 USP54Q70EL1 1684 aa16.76■□□□□ 0.27
CDK5-201ENST00000297518 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
CDK5-201ENST00000297518 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
CDK5-201ENST00000297518 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDK5-201ENST00000297518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDK5-201ENST00000297518 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
CDK5-201ENST00000297518 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
CDK5-201ENST00000297518 MYOM1P52179 1685 aa16.73■□□□□ 0.27
CDK5-201ENST00000297518 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
CDK5-201ENST00000297518 ANKRD36BQ8N2N9 1353 aa16.73■□□□□ 0.27
CDK5-201ENST00000297518 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
CDK5-201ENST00000297518 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
CDK5-201ENST00000297518 NFAT5O94916 1531 aa16.71■□□□□ 0.27
CDK5-201ENST00000297518 NME9Q86XW9 330 aa16.71■□□□□ 0.27
CDK5-201ENST00000297518 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
CDK5-201ENST00000297518 ZRANB1Q9UGI0 708 aa16.7■□□□□ 0.26
CDK5-201ENST00000297518 AATKQ6ZMQ8 1374 aa16.69■□□□□ 0.26
CDK5-201ENST00000297518 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
CDK5-201ENST00000297518 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
CDK5-201ENST00000297518 COL18A1P39060 1754 aa16.69■□□□□ 0.26
CDK5-201ENST00000297518 SPATA31A5Q5VU36 1347 aa16.69■□□□□ 0.26
CDK5-201ENST00000297518 SPATA31A7Q8IWB4 1347 aa16.69■□□□□ 0.26
CDK5-201ENST00000297518 SOX12O15370 315 aa16.68■□□□□ 0.26
CDK5-201ENST00000297518 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
CDK5-201ENST00000297518 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
CDK5-201ENST00000297518 BRWD3Q6RI45 1802 aa16.68■□□□□ 0.26
CDK5-201ENST00000297518 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
CDK5-201ENST00000297518 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
CDK5-201ENST00000297518 EVA1CP58658 441 aa16.67■□□□□ 0.26
CDK5-201ENST00000297518 ARHGEF25Q86VW2 580 aa16.67■□□□□ 0.26
CDK5-201ENST00000297518 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
CDK5-201ENST00000297518 ABCC6O95255 1503 aa16.66■□□□□ 0.26
CDK5-201ENST00000297518 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
CDK5-201ENST00000297518 SPATA31A1Q5TZJ5 1347 aa16.66■□□□□ 0.26
CDK5-201ENST00000297518 LTN1O94822 1766 aa16.65■□□□□ 0.26
CDK5-201ENST00000297518 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDK5-201ENST00000297518 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
CDK5-201ENST00000297518 KIF20BQ96Q89 1820 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms