RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 CCDC57Q2TAC2 916 aa15.8■□□□□ 0.12
PLXNB1-201ENST00000296440 TANGO6Q9C0B7 1094 aa15.8■□□□□ 0.12
PLXNB1-201ENST00000296440 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
PLXNB1-201ENST00000296440 BRPF1P55201 1214 aaPredicted RBP15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 PSMD1Q99460 953 aa15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 RAI14Q9P0K7 980 aa15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 ECM2O94769 699 aaPredicted RBP15.79■□□□□ 0.12
PLXNB1-201ENST00000296440 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 CCDC69A6NI79 296 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 CALRP27797 417 aaKnown RBP15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 MTHFSP49914 203 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 GRIPAP1Q4V328 841 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 CCDC30Q5VVM6 783 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
PLXNB1-201ENST00000296440 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
PLXNB1-201ENST00000296440 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
PLXNB1-201ENST00000296440 DDX49Q9Y6V7 483 aaKnown RBP15.77■□□□□ 0.12
PLXNB1-201ENST00000296440 CABP2Q9NPB3 220 aa15.77■□□□□ 0.11
PLXNB1-201ENST00000296440 PSMA5P28066 241 aa15.76■□□□□ 0.11
PLXNB1-201ENST00000296440 GAS2L2Q8NHY3 880 aa15.76■□□□□ 0.11
PLXNB1-201ENST00000296440 CCDC181Q5TID7 509 aa15.76■□□□□ 0.11
PLXNB1-201ENST00000296440 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
PLXNB1-201ENST00000296440 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
PLXNB1-201ENST00000296440 ZMYND15Q9H091 742 aa15.75■□□□□ 0.11
PLXNB1-201ENST00000296440 LRP2BPQ9P2M1 347 aa15.75■□□□□ 0.11
PLXNB1-201ENST00000296440 ANAPC15P60006 121 aa15.75■□□□□ 0.11
PLXNB1-201ENST00000296440 STARD3NLO95772 234 aa15.75■□□□□ 0.11
PLXNB1-201ENST00000296440 GNAI1P63096 354 aa15.75■□□□□ 0.11
PLXNB1-201ENST00000296440 COMMD10Q9Y6G5 202 aa15.75■□□□□ 0.11
PLXNB1-201ENST00000296440 PHLDB1Q86UU1 1377 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 CLASRPQ8N2M8 674 aaKnown RBP15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 FILIP1LQ4L180 1135 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 TDO2P48775 406 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 POGZQ7Z3K3 1410 aa15.74■□□□□ 0.11
PLXNB1-201ENST00000296440 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 ERLIN2O94905 339 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 E9PSI1 815 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 NOP2P46087 812 aaKnown RBP15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 FEZ1Q99689 392 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 BMP2KQ9NSY1 1161 aaPredicted RBP15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.114e-8■■■□□ 15.2
PLXNB1-201ENST00000296440 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 SDF4Q9BRK5 362 aa15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 NAT10Q9H0A0 1025 aaKnown RBP15.73■□□□□ 0.11
PLXNB1-201ENST00000296440 MPHOSPH6Q99547 160 aaKnown RBP15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 DDX19BQ9UMR2 479 aa15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 MYO1BO43795 1136 aa15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 PABPN1LA6NDY0 278 aaKnown RBP15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 SIL1Q9H173 461 aa15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 POLD1P28340 1107 aa15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 ENOX2Q16206 610 aaKnown RBP15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 GGNBP2Q9H3C7 697 aa15.72■□□□□ 0.11
PLXNB1-201ENST00000296440 STIM1Q13586 685 aa15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 TRIM22Q8IYM9 498 aa15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 LIG1P18858 919 aa15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 ZSCAN25Q6NSZ9 544 aa15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 KIF15Q9NS87 1388 aa15.71■□□□□ 0.11
PLXNB1-201ENST00000296440 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.1
PLXNB1-201ENST00000296440 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.1
PLXNB1-201ENST00000296440 DEF6Q9H4E7 631 aa15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 EZRP15311 586 aaKnown RBP15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 CCDC150Q8NCX0 1101 aa15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 ACBD3Q9H3P7 528 aa15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 ABCF2Q9UG63 623 aa15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 CCDC85AQ96PX6 553 aaPredicted RBP15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 TMOD3Q9NYL9 352 aa15.7■□□□□ 0.1
PLXNB1-201ENST00000296440 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
PLXNB1-201ENST00000296440 CAVIN4Q5BKX8 364 aa15.69■□□□□ 0.1
PLXNB1-201ENST00000296440 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
PLXNB1-201ENST00000296440 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
PLXNB1-201ENST00000296440 SEC63Q9UGP8 760 aaKnown RBP15.69■□□□□ 0.1
PLXNB1-201ENST00000296440 CUL5Q93034 780 aa15.69■□□□□ 0.1
PLXNB1-201ENST00000296440 C6orf229H3BNL8 230 aa15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 COG6Q9Y2V7 657 aa15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 NF2P35240 595 aa15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 CCDC191Q8NCU4 936 aa15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 ZNHIT6Q9NWK9 470 aaKnown RBP15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 MRPS9P82933 396 aaKnown RBP15.68■□□□□ 0.1
PLXNB1-201ENST00000296440 TMEM132EQ6IEE7 984 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms