RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
RTP3-201ENST00000296142 RGPD1P0DJD0 1748 aa12.38□□□□□ -0.43
RTP3-201ENST00000296142 CHRNA2Q15822 529 aa12.37□□□□□ -0.43
RTP3-201ENST00000296142 COL14A1Q05707 1796 aaKnown RBP12.37□□□□□ -0.43
RTP3-201ENST00000296142 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
RTP3-201ENST00000296142 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
RTP3-201ENST00000296142 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
RTP3-201ENST00000296142 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
RTP3-201ENST00000296142 EZH2Q15910 746 aaKnown RBP12.36□□□□□ -0.43
RTP3-201ENST00000296142 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
RTP3-201ENST00000296142 TRIM37O94972 964 aa12.35□□□□□ -0.43
RTP3-201ENST00000296142 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
RTP3-201ENST00000296142 PRDM11Q9NQV5 511 aa12.35□□□□□ -0.43
RTP3-201ENST00000296142 SPATA31A5Q5VU36 1347 aa12.34□□□□□ -0.43
RTP3-201ENST00000296142 SPATA31A7Q8IWB4 1347 aa12.34□□□□□ -0.43
RTP3-201ENST00000296142 ACIN1Q9UKV3 1341 aaKnown RBP12.34□□□□□ -0.43
RTP3-201ENST00000296142 GPRASP1Q5JY77 1395 aa12.34□□□□□ -0.43
RTP3-201ENST00000296142 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
RTP3-201ENST00000296142 ADGRB1O14514 1584 aa12.33□□□□□ -0.44
RTP3-201ENST00000296142 ADGRB2O60241 1585 aa12.32□□□□□ -0.44
RTP3-201ENST00000296142 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
RTP3-201ENST00000296142 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
RTP3-201ENST00000296142 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
RTP3-201ENST00000296142 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
RTP3-201ENST00000296142 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
RTP3-201ENST00000296142 KIAA0232Q92628 1395 aa12.31□□□□□ -0.44
RTP3-201ENST00000296142 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
RTP3-201ENST00000296142 PHRF1Q9P1Y6 1649 aaKnown RBP12.31□□□□□ -0.44
RTP3-201ENST00000296142 ARHGEF28Q8N1W1 1705 aaKnown RBP12.3□□□□□ -0.44
RTP3-201ENST00000296142 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
RTP3-201ENST00000296142 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
RTP3-201ENST00000296142 APBA3O96018 575 aa12.29□□□□□ -0.44
RTP3-201ENST00000296142 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
RTP3-201ENST00000296142 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
RTP3-201ENST00000296142 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
RTP3-201ENST00000296142 NUDT16Q96DE0 195 aaKnown RBP12.28□□□□□ -0.44
RTP3-201ENST00000296142 CAMKK2Q96RR4 588 aa12.28□□□□□ -0.44
RTP3-201ENST00000296142 KAT6BQ8WYB5 2073 aa12.27□□□□□ -0.44
RTP3-201ENST00000296142 EVA1CP58658 441 aa12.27□□□□□ -0.45
RTP3-201ENST00000296142 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.45
RTP3-201ENST00000296142 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
RTP3-201ENST00000296142 CDK19Q9BWU1 502 aa12.26□□□□□ -0.45
RTP3-201ENST00000296142 ATP7BP35670 1465 aa12.25□□□□□ -0.45
RTP3-201ENST00000296142 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
RTP3-201ENST00000296142 CAMTA1Q9Y6Y1 1673 aa12.25□□□□□ -0.45
RTP3-201ENST00000296142 ACEP12821 1306 aa12.24□□□□□ -0.45
RTP3-201ENST00000296142 PDE3BQ13370 1112 aa12.24□□□□□ -0.45
RTP3-201ENST00000296142 RREB1Q92766 1687 aa12.24□□□□□ -0.45
RTP3-201ENST00000296142 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
RTP3-201ENST00000296142 EIF3AQ14152 1382 aaKnown RBP12.23□□□□□ -0.45
RTP3-201ENST00000296142 ABTB2Q8N961 1025 aa12.23□□□□□ -0.45
RTP3-201ENST00000296142 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
RTP3-201ENST00000296142 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
RTP3-201ENST00000296142 SSH2Q76I76 1423 aa12.23□□□□□ -0.45
RTP3-201ENST00000296142 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
RTP3-201ENST00000296142 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
RTP3-201ENST00000296142 NBPF8Q3BBV2 869 aa12.22□□□□□ -0.45
RTP3-201ENST00000296142 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
RTP3-201ENST00000296142 NBPF1Q3BBV0 1214 aa12.2□□□□□ -0.46
RTP3-201ENST00000296142 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
RTP3-201ENST00000296142 YY1P25490 414 aa12.19□□□□□ -0.46
RTP3-201ENST00000296142 TCP11L2Q8N4U5 519 aa12.19□□□□□ -0.46
RTP3-201ENST00000296142 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
RTP3-201ENST00000296142 PPP1R1BQ9UD71 204 aaPredicted RBP12.19□□□□□ -0.46
RTP3-201ENST00000296142 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
RTP3-201ENST00000296142 PDGFDQ9GZP0 370 aaPredicted RBP12.18□□□□□ -0.46
RTP3-201ENST00000296142 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
RTP3-201ENST00000296142 SRPK2P78362 688 aaKnown RBP12.17□□□□□ -0.46
RTP3-201ENST00000296142 NBPF14Q5TI25 921 aa12.17□□□□□ -0.46
RTP3-201ENST00000296142 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
RTP3-201ENST00000296142 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
RTP3-201ENST00000296142 SOX12O15370 315 aa12.16□□□□□ -0.46
RTP3-201ENST00000296142 GCP02774 474 aa12.16□□□□□ -0.46
RTP3-201ENST00000296142 PPIP5K1Q6PFW1 1433 aa12.16□□□□□ -0.46
RTP3-201ENST00000296142 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
RTP3-201ENST00000296142 COL5A2P05997 1499 aaPredicted RBP12.15□□□□□ -0.46
RTP3-201ENST00000296142 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.46
RTP3-201ENST00000296142 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
RTP3-201ENST00000296142 PEAK1Q9H792 1746 aa12.15□□□□□ -0.46
RTP3-201ENST00000296142 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 KCNQ2O43526 872 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 NLRP6P59044 892 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 USP19O94966 1318 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
RTP3-201ENST00000296142 CABP1Q9NZU7 370 aa12.13□□□□□ -0.47
RTP3-201ENST00000296142 COL18A1P39060 1754 aa12.13□□□□□ -0.47
RTP3-201ENST00000296142 KIAA1210Q9ULL0 1709 aa12.13□□□□□ -0.47
RTP3-201ENST00000296142 CPDO75976 1380 aa12.13□□□□□ -0.47
RTP3-201ENST00000296142 ZBTB7AO95365 584 aa12.12□□□□□ -0.47
RTP3-201ENST00000296142 TOM1L2Q6ZVM7 507 aa12.12□□□□□ -0.47
RTP3-201ENST00000296142 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
RTP3-201ENST00000296142 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
RTP3-201ENST00000296142 PIK3C2AO00443 1686 aa12.12□□□□□ -0.47
RTP3-201ENST00000296142 MYOM1P52179 1685 aa12.12□□□□□ -0.47
RTP3-201ENST00000296142 DDB1Q16531 1140 aa12.11□□□□□ -0.47
RTP3-201ENST00000296142 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms