RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 ZNF428Q96B54 188 aa15□□□□□ -0.01
CDH11-201ENST00000268603 DRC1Q96MC2 740 aa15□□□□□ -0.01
CDH11-201ENST00000268603 RIPK4P57078 832 aa15□□□□□ -0.01
CDH11-201ENST00000268603 ANKRD30AQ9BXX3 1397 aa15□□□□□ -0.01
CDH11-201ENST00000268603 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
CDH11-201ENST00000268603 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
CDH11-201ENST00000268603 TTC16Q8NEE8 873 aa14.99□□□□□ -0.01
CDH11-201ENST00000268603 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDH11-201ENST00000268603 PSMA5P28066 241 aa14.99□□□□□ -0.01
CDH11-201ENST00000268603 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
CDH11-201ENST00000268603 WDR78Q5VTH9 848 aa14.98□□□□□ -0.01
CDH11-201ENST00000268603 DNAI2Q9GZS0 605 aa14.98□□□□□ -0.01
CDH11-201ENST00000268603 CENPQQ7L2Z9 268 aaPredicted RBP14.98□□□□□ -0.01
CDH11-201ENST00000268603 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
CDH11-201ENST00000268603 LUC7LQ9NQ29 371 aaKnown RBP14.98□□□□□ -0.01
CDH11-201ENST00000268603 BCCIPQ9P287 314 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDH11-201ENST00000268603 UBTFL1P0CB47 393 aaPredicted RBP14.97□□□□□ -0.01
CDH11-201ENST00000268603 FAM193AP78312 1265 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 STIM1Q13586 685 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 CNTROBQ8N137 903 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 TRIM5Q9C035 493 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 PANK3Q9H999 370 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 CUX2O14529 1486 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 HMOX1P09601 288 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 NUP133Q8WUM0 1156 aa14.97□□□□□ -0.01
CDH11-201ENST00000268603 HOMER2Q9NSB8 354 aa14.96□□□□□ -0.01
CDH11-201ENST00000268603 CCDC39Q9UFE4 941 aa14.96□□□□□ -0.01
CDH11-201ENST00000268603 KINO60870 393 aaKnown RBP14.96□□□□□ -0.01
CDH11-201ENST00000268603 USP5P45974 858 aa14.96□□□□□ -0.01
CDH11-201ENST00000268603 DDX19BQ9UMR2 479 aa14.96□□□□□ -0.01
CDH11-201ENST00000268603 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
CDH11-201ENST00000268603 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.01
CDH11-201ENST00000268603 PUS7Q96PZ0 661 aaKnown RBP14.96□□□□□ -0.02
CDH11-201ENST00000268603 PIP4K2AP48426 406 aaPredicted RBP14.96□□□□□ -0.02
CDH11-201ENST00000268603 GIMAP7Q8NHV1 300 aa14.96□□□□□ -0.02
CDH11-201ENST00000268603 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.96□□□□□ -0.02
CDH11-201ENST00000268603 TAF3Q5VWG9 929 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 PIBF1Q8WXW3 757 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 RSPH4AQ5TD94 716 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 CCDC69A6NI79 296 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 STAMBPO95630 424 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 CCDC158Q5M9N0 1113 aa14.95□□□□□ -0.02
CDH11-201ENST00000268603 E9PSI1 815 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 SERPINC1P01008 464 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 CCDC91Q7Z6B0 441 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
CDH11-201ENST00000268603 RABEP1Q15276 862 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 CRBNQ96SW2 442 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 POTEJP0CG39 1038 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 PPFIBP1Q86W92 1011 aa14.94□□□□□ -0.02
CDH11-201ENST00000268603 GOLGA6L10A0A0M3HER8 536 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 STK38Q15208 465 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 CCP110O43303 1012 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 PPP4R3AQ6IN85 833 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 CEP63Q96MT8 703 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 DDX23Q9BUQ8 820 aaKnown RBP14.93□□□□□ -0.02
CDH11-201ENST00000268603 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 BICDL1Q6ZP65 573 aa14.93□□□□□ -0.02
CDH11-201ENST00000268603 PABPN1LA6NDY0 278 aaKnown RBP14.92□□□□□ -0.02
CDH11-201ENST00000268603 RNF214Q8ND24 703 aa14.92□□□□□ -0.02
CDH11-201ENST00000268603 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDH11-201ENST00000268603 NUCB2P80303 420 aa14.92□□□□□ -0.02
CDH11-201ENST00000268603 DDX54Q8TDD1 881 aaKnown RBP14.92□□□□□ -0.02
CDH11-201ENST00000268603 BMP2KQ9NSY1 1161 aaPredicted RBP14.92□□□□□ -0.02
CDH11-201ENST00000268603 TMOD2Q9NZR1 351 aa14.92□□□□□ -0.02
CDH11-201ENST00000268603 FAM177A1Q8N128 213 aaPredicted RBP14.91□□□□□ -0.02
CDH11-201ENST00000268603 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
CDH11-201ENST00000268603 EPB41L2O43491 1005 aaKnown RBP14.91□□□□□ -0.02
CDH11-201ENST00000268603 DZIP1LQ8IYY4 767 aaKnown RBP14.91□□□□□ -0.02
CDH11-201ENST00000268603 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
CDH11-201ENST00000268603 LNPKQ9C0E8 428 aa14.91□□□□□ -0.02
CDH11-201ENST00000268603 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
CDH11-201ENST00000268603 ZNF396Q96N95 335 aaPredicted RBP14.91□□□□□ -0.02
CDH11-201ENST00000268603 PHLDB1Q86UU1 1377 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 STK3Q13188 491 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 NACAP1Q9BZK3 213 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 GRM1Q13255 1194 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 PDE4AP27815 886 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 MPHOSPH8Q99549 860 aa14.9□□□□□ -0.02
CDH11-201ENST00000268603 MTERF4Q7Z6M4 381 aaKnown RBP14.89□□□□□ -0.03
CDH11-201ENST00000268603 NFKBIBQ15653 356 aa14.89□□□□□ -0.03
CDH11-201ENST00000268603 TSHZ2Q9NRE2 1034 aa14.89□□□□□ -0.03
CDH11-201ENST00000268603 TNIP1Q15025 636 aa14.89□□□□□ -0.03
CDH11-201ENST00000268603 ESCO1Q5FWF5 840 aa14.89□□□□□ -0.03
CDH11-201ENST00000268603 SPC24Q8NBT2 197 aa14.89□□□□□ -0.03
CDH11-201ENST00000268603 MRPS9P82933 396 aaKnown RBP14.89□□□□□ -0.03
CDH11-201ENST00000268603 CCDC57Q2TAC2 916 aa14.89□□□□□ -0.03
CDH11-201ENST00000268603 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
CDH11-201ENST00000268603 LIG1P18858 919 aa14.88□□□□□ -0.03
CDH11-201ENST00000268603 CCDC113Q9H0I3 377 aa14.88□□□□□ -0.03
CDH11-201ENST00000268603 CBX1P83916 185 aa14.88□□□□□ -0.03
CDH11-201ENST00000268603 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
CDH11-201ENST00000268603 APAF1O14727 1248 aa14.87□□□□□ -0.03
CDH11-201ENST00000268603 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms